TBGR-Browse-Bra-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_snRNA_1	Retrotransposons	Ret_other	snRNA	176	7379733	7379908	+
A01_snRNA_2	Retrotransposons	Ret_other	snRNA	119	7380476	7380594	+
A01_snRNA_3	Retrotransposons	Ret_other	snRNA	185	7546330	7546514	-
A01_snRNA_4	Retrotransposons	Ret_other	snRNA	162	28356255	28356416	+
A01_snRNA_5	Retrotransposons	Ret_other	snRNA	163	28362459	28362621	+
A01_snRNA_6	Retrotransposons	Ret_other	snRNA	162	28363968	28364129	+
A01_snRNA_7	Retrotransposons	Ret_other	snRNA	163	28364486	28364648	+
A02_snRNA_8	Retrotransposons	Ret_other	snRNA	198	13273510	13273707	-
A02_snRNA_9	Retrotransposons	Ret_other	snRNA	162	28379605	28379766	+
A02_snRNA_10	Retrotransposons	Ret_other	snRNA	162	28437407	28437568	+
A02_snRNA_11	Retrotransposons	Ret_other	snRNA	193	28439763	28439955	+
A02_snRNA_12	Retrotransposons	Ret_other	snRNA	162	28441932	28442093	+
A02_snRNA_13	Retrotransposons	Ret_other	snRNA	162	28443043	28443204	+
A03_snRNA_14	Retrotransposons	Ret_other	snRNA	129	15976921	15977049	+
A03_snRNA_15	Retrotransposons	Ret_other	snRNA	171	16018433	16018603	+
A03_snRNA_16	Retrotransposons	Ret_other	snRNA	194	26269476	26269669	+
A05_snRNA_17	Retrotransposons	Ret_other	snRNA	172	11648744	11648915	+
A05_snRNA_18	Retrotransposons	Ret_other	snRNA	193	27006098	27006290	-
A06_snRNA_19	Retrotransposons	Ret_other	snRNA	164	22955720	22955883	-
A06_snRNA_20	Retrotransposons	Ret_other	snRNA	164	22957776	22957939	-

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_1

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

176

Start:

7379733

End:

7379908

Strand:

+

>A01_snRNA_1

TTGAAAGGTACTTACCTGGACGGGGTCAACTCATGATCAAGAAGATGAGTGGCCTAAGCTAGTGACCTCCATTGCACATAACGGAGGGGTGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGTTGGGGCCTGCGTTCGCGCGGCCCCTACCAATT

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_2

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

119

Start:

7380476

End:

7380594

Strand:

+

>A01_snRNA_2

AAGATACATACCTGGACGGGGTCAACAAACGTTCAAGACGTTTTGAGTGGCCTGGGCTAGTGATATCCATTGCACTGTGGAAGTGTGCTGTATAGCTTATGGTCTCTCCAAGTCGGAGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_3

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

185

Start:

7546330

End:

7546514

Strand:

-

>A01_snRNA_3

AAAGTTTAACTGTAGGGTAATGGCAGGGACCGCGCGAACGCTGATCCCCACTGCCACAAATAATGACGCAGGCTCTCCCACATGGGGAGACCTTAAGCTAAGCACCCCTCCGTTATGTGCAGTGGAGGTCGCTAGCTTAGGCTACTCGTCTTGTTGATCAAGAGTCGACCCCGTCCAGGTAAGTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_4

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28356255

End:

28356416

Strand:

+

>A01_snRNA_4

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACCGAGGAAGGGCGCTTAGCCTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGAGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_5

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

28362459

End:

28362621

Strand:

+

>A01_snRNA_5

TACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACCGAGGAAGGGCGCTTAGCCTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGAGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_6

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28363968

End:

28364129

Strand:

+

>A01_snRNA_6

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACCGAGGAAGGGCGCTTAGCCTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGAGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_snRNA_7

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

28364486

End:

28364648

Strand:

+

>A01_snRNA_7

TACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACCGAGGAAGGGCGCTTAGCCTAAAGTCTTCTCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGAGGGGGTTTGCGTTCGCGCAGCCTCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_8

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

198

Start:

13273510

End:

13273707

Strand:

-

>A02_snRNA_8

TGGTAGGGACCGCGCGAACGCAGGCCCCCTTTTGCCACAAATAATGACGTAGGCTCTTTCTCATGGAAAGACCTTAAGCTAAGCACCCCTCCGTACAGTGCAATGGAGGTCAGTAGCCTAGGCCACTCGTCTTCTTGATCACGAGTTGACCCCGTCCAGGTAAGTATTTTACTCGTTGCGCCAAGGTCTCCTCTTATA

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_9

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28379605

End:

28379766

Strand:

+

>A02_snRNA_9

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_10

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28437407

End:

28437568

Strand:

+

>A02_snRNA_10

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACAAGTGGCCTAGGCTAGTGACCTCCATTGCACTAAGGAGGGGCGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_11

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

193

Start:

28439763

End:

28439955

Strand:

+

>A02_snRNA_11

GCAAATTACTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGCGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAAGGAGCCTGCGTTCGCGCGGCTCCTACTATCTAACCTTAGTATTAAATGTTGG

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_12

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28441932

End:

28442093

Strand:

+

>A02_snRNA_12

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTAAGGAGGGGTGCTTAGCTTAAGGTCTCCCCAAGCGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A02_snRNA_13

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

28443043

End:

28443204

Strand:

+

>A02_snRNA_13

ACTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGTGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCA

Brassica rapa (Chiifu_V3.0)

ID:

A03_snRNA_14

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

129

Start:

15976921

End:

15977049

Strand:

+

>A03_snRNA_14

ACTTACCTGGATGGGGTCGACTCTTTATCAAGAAGACAAGTGGCCTAGGGTAATGACTTTCATTGTACTAAAGGCCTAAGGTCTTTCTCAAGTGGAAGAGCCTACTTCATCATTTGTGGCAGAGGGGGT

Brassica rapa (Chiifu_V3.0)

ID:

A03_snRNA_15

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

171

Start:

16018433

End:

16018603

Strand:

+

>A03_snRNA_15

GCAAATTACTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACTTAGGAAGGGCGCTTAGCTTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGAGGGGGTTTGCGTCCGCGCAGCCCCCACCAAT

Brassica rapa (Chiifu_V3.0)

ID:

A03_snRNA_16

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

194

Start:

26269476

End:

26269669

Strand:

+

>A03_snRNA_16

TTGAAAGATACTTACCTGGACGGGGTCGACTCTTGATCAAGAAGTAAAGTGGCCTAAGTTAGTGACTTCCATTGCACATTAAGGAAGGGTGCTTAGCTTAAAGTCTTCCCAAGTGGAAGAGCTTGCGTCATAATTTGTGGCAGTGGAGGCCTGCGTTCGCGCGGCCTCTTCCAATTTTAAAAGTTCAAATTTTG

Brassica rapa (Chiifu_V3.0)

ID:

A05_snRNA_17

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

172

Start:

11648744

End:

11648915

Strand:

+

>A05_snRNA_17

GCAATTCACTTACCTAGACATGGTCAACTCGTAATCAAAAAGATGAGTTACCTAGACTAGTGACTTCATTGCACCTTAAAGAAGGGAGCTTAGCCTAAGGTCTTTTCAAGTAGAAGAGCCTGCGTCATTAGTTGTGGAATAGAAGGTTTTCGTTCGCGCAGCCCCTACCAGT

Brassica rapa (Chiifu_V3.0)

ID:

A05_snRNA_18

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

193

Start:

27006098

End:

27006290

Strand:

-

>A05_snRNA_18

AAAATTAAATACTGGAAGACTGGTGGGGGTTGCGCGAACGCAAACCCCCCTGCCACAAATAATGACGTAGGCTCTTCCACTTGGGAAGACCTTAGGCTAAGCACCCTTCCGGTATGTGCAATGGAAGTCACTAGCCTAGGCCACTCGTCTTCTTGATCACGAGTCGACCCCGTCCAGGTAAGTGATTTGCTAC

Brassica rapa (Chiifu_V3.0)

ID:

A06_snRNA_19

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

164

Start:

22955720

End:

22955883

Strand:

-

>A06_snRNA_19

TGGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACACAGGCTCTCCCGCTTGGGGAGACCTTAGGCTAAGCGCCCCTCCTTAAAGTGCAATGGAGGTCACTAGCCTAGGCCACTCATCTTCTTGATCATGAGTTGACCCTGTCCAGGTAAGT

Brassica rapa (Chiifu_V3.0)

ID:

A06_snRNA_20

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

164

Start:

22957776

End:

22957939

Strand:

-

>A06_snRNA_20

TGGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACGCGGGCTCTCCCACTTGGGGAGACCTTAAGCTAAGCGCCCCTCCTCAGAGTGCAATGGAGGTCACTAGCCTAGGCCACTCATCTTCATGTTCATGAGTTGACCCCGTCCAGGTAAGT