Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
266Start:
2675970End:
2676235Strand:
->A01_LTR-Ngaro_1
TGTGGCTGCTGTTGCTGCTGCTGCTGCTGTGGTGTTGGCTGTTGCTGGTGTTGAGGCGCTGCCTGCTGCTGTTGTTGCTGCTGTTGAGAAGTTGGTTGGTTTTGATGTTGTTGTTGTTGTTGGTGTTGCTGCTGCTGTTGTTGATGATGTTGCTGTTGTTGTTGCTGCTGTTGCTGTTGTTGCTGTGCACGTTGCATCAAGAGTTGTTGCATTTGTATTTGCTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGTGAGACCTGTGG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
146Start:
23417029End:
23417174Strand:
+>A01_LTR-Ngaro_2
ACAATCTCCACCACAAGGCAACAATAACAACAACAACAACAATGGTGGAAACAATGACAACAACAACAACAACAATAACAATGGTGGAGGAAGCAACAATGGTAATAACAACAACAATGGGAATAATAACAACAATAATGGCAACA
Brassica rapa (Chiifu_V3.0)
ID:
A02_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
102Start:
19724431End:
19724532Strand:
+>A02_LTR-Ngaro_3
TATTTATATGATATATAAATATATATTTATATTTATATATGTACCCATGCTCTATTCATATACATAAATTATAAGTTTAGCCGTTTCTCATCCCCGCTCCAT
Brassica rapa (Chiifu_V3.0)
ID:
A03_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
145Start:
530985End:
531129Strand:
->A03_LTR-Ngaro_4
AGTTGTTGTAGTAGGAGCAGATGTATCTATCATTGTAGTATCTGTAGATGTAGTATCTGTAGATGTAGTAGGAGCAGACGTAGTAGTAGTAGTGGTAAGCAGAGGAGGAGTAGATGAAGTAGCTGTGGGCGCAGAGGTAGATGAT
Brassica rapa (Chiifu_V3.0)
ID:
A03_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
91Start:
18009553End:
18009643Strand:
->A03_LTR-Ngaro_5
ATGTACACATGTGAAGATGTACACGTGTACACACATAGTCTATGTCCACATGTAAACTTGTACGCATATACACATACACATACTTACATGT
Brassica rapa (Chiifu_V3.0)
ID:
A03_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
281Start:
19073210End:
19073490Strand:
->A03_LTR-Ngaro_6
GCTGTTGTTTCCGTTGTTATTATTCCCATTGTTGTTATTACCATTGTTGCCATTATTGCTGTTATTTCCATTGTTTCCATTATTGTTGTTATTACCATTGTTGTTGTTATCATTGTTTCCACCATTGTTTGTGTTGCCATTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTATTACCATTGTTGTTGTTGTCATTGTTTCCACCATTGTTATTGTTGTTGTTGTTGTTGTTTTCTTGTTGTGGCGAAGGTGGAGGTTGTGAGTCTGAAGAAGGAGGTG
Brassica rapa (Chiifu_V3.0)
ID:
A04_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
98Start:
3144601End:
3144698Strand:
+>A04_LTR-Ngaro_7
CTTCGAAGCCTTATCACGAATTTAATAACCACACGTATATATGTAAATATATATATATATATATTTTTTTTTATGTAACCACGTATATATATATACAT
Brassica rapa (Chiifu_V3.0)
ID:
A04_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
84Start:
13580908End:
13580991Strand:
->A04_LTR-Ngaro_8
ACATGCCCTTACGTAACACACGCACGTATATCAGCCACACTCATACGCGCGCACGCGCTCACACACACATATATATATATATAC
Brassica rapa (Chiifu_V3.0)
ID:
A04_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
87Start:
13825422End:
13825508Strand:
->A04_LTR-Ngaro_9
GGAGGAGTAATAGACAGCAATAGCAAGTATATCATGCAAATGTATAAAAACCATATATATATATATATATATATATATATATATATA
Brassica rapa (Chiifu_V3.0)
ID:
A05_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
104Start:
2468349End:
2468452Strand:
+>A05_LTR-Ngaro_10
GCTACTTCCTCTGCTCCAGCATTTGGTTTTACTACCTCCACTTCTGCTGCTGCAACTACTGCTTTTGCTGTACCCCAGATAGCATCAACTACTGCTACTACAAC
Brassica rapa (Chiifu_V3.0)
ID:
A05_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
220Start:
21250823End:
21251042Strand:
+>A05_LTR-Ngaro_11
AAACAATGATAACAACAACAACAATGGTAATAACAACAATGACAACAACAACAATGGCGGAAACAATGACAACAACAACAGCAATGGTAATAACAACAATGATGGCAATAATGGTAACAAAAACAATGGCAATAACAACAACAATGGTAATAACAACAAGGGGAATAACAATGACAACAACAACAACAATGGGAATAATAATAACAACAAAAACAATAAC
Brassica rapa (Chiifu_V3.0)
ID:
A06_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
103Start:
27568692End:
27568794Strand:
->A06_LTR-Ngaro_12
TGCAAATGTTGTTGCTGCTGAAGATAGAGATGATACTGTTCCTGTTGTTGTTGCCATTGTTGCTGCTGTTGAAACCACTCTTGTTGTTGTTGTTGCTGGTATT
Brassica rapa (Chiifu_V3.0)
ID:
A07_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
156Start:
25718743End:
25718898Strand:
+>A07_LTR-Ngaro_13
CAACAGCAACTCCAGCAGCAGCAACAACCCCAACAACAACAGTTCCAGCAGCAACCACAGTTACAGCAGCTAGCTCAGTCTCAGCAGCAGCAGCAGCAGCAGCTACAACAACATGAGCTGCCACAACAACAGCAGCAGCAACAGTCAACAGCATCC
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
184Start:
692882End:
693065Strand:
+>A08_LTR-Ngaro_14
CATCTATTCCTCCAGCAACAACAGCCACAACAGTTTCATCATCCACAGCAACAACAAACCCAACAGCAGTTCCAGCCACAACAACAGCAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGTTCATTCAACAGCAGCAGTTCCATCACCAGCAGCACCGTCTGCTACATTCTCCTC
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
109Start:
5449126End:
5449234Strand:
+>A08_LTR-Ngaro_15
GACCGCCGCCGGACCACCGCCAGACCGTCGCCTCTTCGCCTTGTCGCCACTGGATGTTAAGAACTATTAAATATATATATATATATATATATAGTTATATAGTTATATA
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
235Start:
13792701End:
13792935Strand:
->A08_LTR-Ngaro_16
TGTGGCAGCTGCTGAGGTGCTGACTGCTGTTGGTGTTGAGGCGCTGGCTGTGGCTGTTGCTGTTGTTGAGAAGGTGGTTGGTTTTGATGTTGCTGCTGTTGTTGCTGGTTATGTTGTTGCTGCTGCTGTTGTTGTGCACGTTGCAATAAGAGTTGTTGCATTTGTATTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTGAGATCTGTGGGTGTTGAGATTGCTGCAATTGCTGTT
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
155Start:
18121880End:
18122034Strand:
+>A08_LTR-Ngaro_17
CAATTGCAGCAGCAGCAGCAACAAAAGATTCAGTTGCAACATCAGCAGCAACAGAAGATTCAGCTGCAACAGCAGCAGAAGATTCAGCTACAACAACGTCAACTAGAACAAGAGTACCAATTACAACAGAAGCTCTTACAGGAGCAACAACAGTC
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
217Start:
18411038End:
18411254Strand:
->A08_LTR-Ngaro_18
TGCTGCTGCTGCTGATGTTGTTGAAGCTGTGACAGCTGATGCTGCTGTTGATGTTGCTGCTGATGATGTTGGAGTTGTGACAATTGATGTTGCTGCTGCTGGAGTTGTGGCAGCTGTTGGTGTTGTTGTTGCTGCTGGATCTGCTGTTGTTGCTGCTGCTGATGGATCTGTTGTTGCTGCTGTTGTTGTTGTTGCTGCTGGTGCTGTTGCTGTTGCT
Brassica rapa (Chiifu_V3.0)
ID:
A08_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
86Start:
21727020End:
21727105Strand:
->A08_LTR-Ngaro_19
AAATTAAAACAAAAAAGCTCCGTTACCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGATAAC
Brassica rapa (Chiifu_V3.0)
ID:
A09_LTR-Ngaro_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
95Start:
1605221End:
1605315Strand:
+>A09_LTR-Ngaro_20
TATGGTCTAGTGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTAGGACCTTATTTTATTGTTTTTCTTTAGTTAGGAC