Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
208Start:
152282End:
152489Strand:
->A01_LTR-Gypsy_1
ATAAACGAACAGCTTTGAGCTTGACTCCGGCTAGGCTCTCATAGCGAGCTTCACCTTCGTCACCGATCTCATGGCGATCGGGTCAAGATGACTCATGGCGTCAATCTATAGCAACATCAAAGCATAAAGTCTCTCATCATTCTCTTCTCCCCTACTTATACTCTCACCTCCGATAGCTTCTTCAGACTCTTCTAACAGCAAACCCTCT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
90Start:
247493End:
247582Strand:
+>A01_LTR-Gypsy_2
CAGTAGGAGTGAGAGCTGGAAATCCAGTAGGAGTGAGTGCTGGTAAATCCAGTAGGAGTGAGAGCTGGCTGCCTAGTAGGAGTGAGAGCT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
227Start:
388422End:
388648Strand:
->A01_LTR-Gypsy_3
GGGCCTGACTGGTTTAACCGCAGCGGTTGCGGTTGCGGTTGCGGGAGTTTGCGGATGCGGGTGGTTGCGGTTTCTAGCGGTTTTAAGAGATTTGTACGACTGGTTATGCGGTTAGAAATTTGTGCGTTTGCGGGATACTTATGACTGGTTAACTACCAAATGCAGCAGCAGTTAAATAATAAATTAACAATATTTACATTTTATACAATTATAAAAATATCAAAAAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
216Start:
511324End:
511539Strand:
+>A01_LTR-Gypsy_4
ATTTTTGATATTTTTATAATTGTATAAAATGTAAATATTATTAATTTATTATTTAACCGCTGCTGCATTTGGTAGTTAACCAGTCATAAGTATCCCGCAAACGCACCAATTTCTAACCGCAGAACTAGTCGTACAAATCTCTTAAAACCGCTAGAAACCGCAACCATCCGCATCCGCAAACTTTCGCAACCGCAACCGCAACCGCTGCGGTTCAAC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
229Start:
1436500End:
1436728Strand:
+>A01_LTR-Gypsy_5
TGATTTTTGATATTTTTATAATTATATAAAATGTAAATATTGTTAATTTATTATTTAACCGCTGCAGTATTTGGTAGTTAACCAGTCATAAGTATCCCGTAAACGCACCAATTTCTAACCGCAGAACCAGTCGTACAAATCTCTTAAAACTGCTAGAAACCGCAACCACCCGCATCTGCAAACGCCCGCAGCCGCAACCGCAACCGCTGCGGTTGAACCAGTCAGACCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
227Start:
1757855End:
1758081Strand:
+>A01_LTR-Gypsy_6
ATTTTTGATATTTTTATAATTGTATAAAATGTAAATATTGTTAATTTATTATTTAACTGCTGCTGCATTTGGTAGTTAACCAGTCATAAGTATCCCGCAAACGCACAAATTTCTAACCGCATAACCAGTCGTACAAATCTCTTAAAACCGCTAGAAACCGCAACCACCCGCATCCGCAAACTCCCGCAACCGCAACCGCAACCGCTGCGGTTAAACCAGTCAGGCCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
227Start:
1758422End:
1758648Strand:
->A01_LTR-Gypsy_7
GGGCCTGACTGGTTTAACCGCAGCGGTTGCGGTTGCGGTTGCGGGAGTTTGCGGATGCGGGTGGTTGCGGTTTCTAGCGGTTTTAAGAGATTTGTACGACTGGTTATGCGGTTAGAAATTTGTGCGTTTGCGGGATACTTATGACTGGTTAACTACCAAATGCAGCAGCAGTTAAATAATAAATTAACAATATTTACATTTTATACAATTATAAAAATATCAAAAAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
227Start:
1759227End:
1759453Strand:
->A01_LTR-Gypsy_8
GGGCCTGACTGGTTCAACCGCAGCGGTTGCGGTTGCGGTTGCGGGAGTTTGCGGATGCGGGTGGTTGCGGTTTCTAGCGGTTTTAAGAGATTTGTACGACTGGTTCTGCGGTTAAAAATTGGTGCGTTTGCGGAATACTTATGACTGGTTAACTACCAAGTGCAGCAGCGGTTAAATAATAAATTAACAATATTTACATTTTATACAATTATAAAAATATCAAAAAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
226Start:
1799821End:
1800046Strand:
+>A01_LTR-Gypsy_9
ATTTTTGATATTTTTATATTGTATAAAATGTAAATCTTGTTAATTTATTATTTAACTGCTGCTGCATTTGGTAGTTAACCAGTCATAAGTATCCTGCAAACGCACCAATTTCTAACCGCAGAACCAGTCGTACAAATCTCTTAAAACCGCTAGAAACCGCAACCACCCGCATCCGCAAACTCCCGCAACCGCAACCGCAACCGCTGCGGTTGAACCAGTCAGGCCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
179Start:
2014604End:
2014782Strand:
->A01_LTR-Gypsy_10
ACGATCTCATGACGATCGTGAGGAAGGAAGACTCATGGCGTCTCACTCTTTCTACAACATCAGCATAGCTCTCTTCTTCGATCAAGCTCTCTATTTATACTCCATCTTCTTCCTTCTCTATTTGCCTCAGCTATTCCAACTGCAAAGCCTCTTATCCAACTAGAGTCTCTTATCCCTTT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
89Start:
2017761End:
2017849Strand:
->A01_LTR-Gypsy_11
GCCGATTCACCGAACTTCATCATCACCGTAACACCACCGCGTTAGCTTCGATCACAGTTTCACCGCACCAATGATAGAGTCTTGATATC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
179Start:
2017985End:
2018163Strand:
->A01_LTR-Gypsy_12
ACGATCTCATGACGATCGTGAGGAAGGAAGACTCATGGCGTCTCACTCTTTCTACAACATCAGCATAGCTCTCTTCTTCGATCAAGCTCTCTATTTATACTCCATCTTCTTCCTTCTCTATTTGCCTCAGCTATTCCAACTGCAAAGCCTCTTATCCAACTAGAGTCTCTTATCCCTTT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
247Start:
2191828End:
2192074Strand:
+>A01_LTR-Gypsy_13
TGATTTTTGATATTTTTATAATTATATTAAATGTAAATATTGTTAATTTATTATTTGACTGTTACCGCATTTGGTAGTTAACCAGTCATAAGTCACCCGCAAACGCACCAATTTTTAACCGCAGTACCAGTCGTATAAATCTCTTAAAACCGCTAGAAACCGCAACCGTCCGCATCCACAAACTCCCGCAACCGCAACCGCAACCGCTGCGTTTGAACCAGTCAGGCCCTTAATGGGTTTGTCTAAA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
539Start:
2549312End:
2549850Strand:
+>A01_LTR-Gypsy_14
AGGTTATCGGAGAATCGCGAATAATCTGGAATCTAGAAGTGAATTGTTGAAGAAAGTGGATCTTCCTAATTTTGTGGGAGCCAATCCAAACGTTTGGATCAATAGAGCAGAAAGGTTCTTTCGATTGGGGAATTTCTCCGAACGTGAGAGATTTGATTTGTTATCTGTGCGTTTTGAGGGAACAGTATTGAATTGGTTTAACATTGAGCTGGAGGAAGAACCGTTTGTAAGTTGGGAAGACTTCAAGGAAAGATTGGTATTGCGTTTTACGCAACGGATGGAGGATGAACCGGGAAAGCGACTGTTTGCAATCACACAGAAGGGGTCGATAACAGAATACATCAATGAGTTTGAAGAATTACGATCAATGGTGACGGGAATAGATGAAAAGAACTTGGTTCATGTGTTCTTTAATGGTCTGAAAACTGAGATGAAAGAGGTGATTAAGATGAAAGAACCAAAGGGATTACGTCAACACATAGCAGCAGTGAGCATGATGGAGGACAGTGCGTTCTGTAAGTCAGTAGCAAGGGTTGCTC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
621Start:
2549975End:
2550595Strand:
+>A01_LTR-Gypsy_15
AGCTAAACGTTTAACTCCAGCAGAGGTGGCTGAGAAAAGACGCTTGGGGTTGTGTTATCAGTGTGATGAGAAGTGGTCCAAGTCTCACGAATGCAAAGCAGTGGGATTACAAGTGATAACTGTGGTTGATGGTTGTGAAGTTGAGTTACATAATGAAGAGTGGATATATACTTTTGAAGATGAAAATGGTGTGGTGACAGAACTCATGGGGATATCACTAGCTTCCTTCTTTGGATTATCGTCTCCGACGACGACGAAGGTGTGGGGTAACATTGGTCAGCTGAAGATAGTGGTAATGCTTGACAGTGGTGCCACACACAATTTCTTATCTCCCACGGTGGTCACACAACTGCAGATCACGCCAGTGAGAGACAGGAAGTTGGAGATCATTTTGGGTACGTGTATATCGGTAAATGGAACGGGTGTTTGCAAGGATGTACAATTTGGCTTGCCAGTGTTGGAAGACAGAGCTGATTTTATCATGTTGGAGCTAGGACAAGTCGATATGATTCTTGGAGTTCAGTGGCTTCGCACGTTGGGAAAGTGTGAAGTGGATTGGGAAAAACATGAAATGTCTTTTGATTTCAAAGGAAAGCGTGTCACATTACAGGGTGATTCGTC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
2891Start:
2550756End:
2553646Strand:
+>A01_LTR-Gypsy_16
GAGCCAACTCAGTTACCGCCTCTGCGTGATAGAGAGCATGCTATCAATCTTATAGCAGGTACTGGGCCCGTAAGTGTTCGTCCTTATCGTTACCCTCACTCATATAAGGAAGAGATGGAAAAGATGGTTTCTCAAATGTTGCAATCGGGCATCATCCGTCCAAGTCGCAGCCCTTATTCCAGTCCCGTGTTGTTGGTAAAGAAAAAGGATGGGACTTGGCGATTTTGCATTGACTACAGAGCATTAAATAGAGTAACAGTGGCTGACAAATTTCCAATTCCCATGATCGATCAGCTGCTAGATGAGTTGTTCGGGGCTCAGATCTTCTCTAAGCTGGATTTGCGTTCGGGTTATCATCAGATCCGAATGAAGGAGCAAGATATACACAAGACAGCGTTCCGAACAGCAGATGGTCATTACGAGTTTGTAGTGATGCCGTTTGGGTTAACAAATGCACCAGCTACATTTCAAGCTCTCATGAATGAGATATTCAGACCATACTTACGAAAATTCATCTTGGTGTTTTTTGATGACATTCTGATATATAGCAAGACAGTGGAAGAGCATGTACAACATTTGGAGATTGTTCTGAAGCTGTTTGAGAAACACCAACTGTTTGCTAATAAAAAGAAATGCTCCTTTGGCCAATCAAAGGTAGAGTATTTGGGTCATTTGATAAGCAGAGAAGGCATTTCGACTGATCCAGAAAAGACAGAGGCAATGCGTAGATGGCCTATTCCAAAGACAGTAAAAGATTTAAGAGGATTCTTGGGTTTAACAGGCTATTACAGGAACTATGTGAAGGGTTATGGTTCTATAGCTCGACCATTAACTAGTTTGTTGAGGAAGGATGCTTTTGAATGGTCAGAGCAAGCTAAGAAGGCATTTGATGCGTTGAAAATTGCGATGTGTACAGCTCCGGTCTTAACGTTACCAGATTTCACAAAGACATTTGTTGTGGAGTCTGATGCATCTGGTTATGGCGTGGGCGCGGTTTTGATGCAGAACCAGAGACCAGTGGCGTATTTCAGCGCAAGGTTGTCAGATAGGGAGCAGATAAAACCCATTTATGAGCGGGAATTAATGGCAATAGTACTTGCGATTCAGAAGTGGCGTCAATATTTGTTGGGGAGGAAGTTTATAGTACACACTGATCAAAAGAGTTTGAAATTTCTCTTAGAACAACGAGAGGTTTCTTTGGATTATCAACGATGGCTTACTAAGCTTTTGGGTTATGATTTTGACATAATCTTTAAGCCAGGATTGGAAAATAAAGCGACAGACGGTTTATCTCGGGTAGGAGTGCAGGATTCTGAGCTGACGAAATTGTCATTAACTGCATTAACGGTTCCGGCGAGTATTCAAATGCAAGACATCTTTGCGGACATTGATCGATCACAGGAGTTACAAACACTGAAGGCAGCGATTGATAATGGGACAGTTAAGAAGGCTGGATATGACATTGTTCAGGGCAGAGTACGATATAAAGGTCGCTTGTTTTTGGCAAAAGATTCACCTCACATACCGTTGATTCTTCGAGAGTATCATGACAGTCTCCTAGGTGGTCATTCCGGGGTATTAAAGACTGTCAAACGTGTTCAAACGGTGTTTCATTGGCGCAAGATGACAAAGGATATTCAGGCGTATGTAGCTGCGTGTGATGTCTGTCAACGACATAAATATTCGACGTTAACTCCAGCTGGGCTCTTGCAACCATTACCTACTCCTCAACAGGTGTGGGATGGTCTTTCTATGGACTTTATTGAAGGGCTTCCGGTTTCTCACGGGGTGAATGTTGTCTTCGTAGTGGTGGACCGCTTAAGCAAGTTTGCACACTTCTTAAGTTTGAAACATCCGTTTACAGCAGTGGACGTTGCGAATCTGTTCATTAAAGAGATCGTCCGCTTACATGGGTTTCCTGCGTCGATTGTGTCAGACAGAGATCGCATTTTCTTAAGTTCTTTTTGGAAGAGTCTGTTCAGATTGGGAGGAGCACAACTGAAGTATAGTACAGCCTTTCATCCGCAAACTGATGGGCAAACAGAAGTTCTTAACCGTTGTCTCGAAACGTACTTGCGTTGCTTTGCTTCGTCCCATCCAAAGTCGTGGGCAAAATACTTGCCTTGGGCAGAGTTATGGTATAACACAAACTATCACACCGCTTTGGGAACAACGCCGTTTCGGGTGGTATATGGACGGGATCCTCCATCTATATTGAAGTTTGAAGAGGGATCCACTGCTAACTTTGATTTGGAATGTATGTTGAAGGAAAGAGATAGTATGTTGAAGCAGATTAAACAACATTTGCTATTGGCTCAGGATCGAATGAAGACTAATGCTGTTAAACATAGGAGAGAGCTGATTTTTCAGGTGGGTGATATGGTGTTTTTGAAGCTACGTCCGTATCGTCAACGTTCTGTGGTGAAACGTTTGTACCAGAAGTTGGCGGCTCGTTATTTTGGTCCATTTGAAGTTACAGGACGTGTTGGAGCGGTCGCGTATAGGTTGAAGCTACCAGAGGAGTCGAAGATTCATAATGTGTTTCACGTTTCTCAATTGAAACCGGTTATTGGGCAGAATCATCACGTGATGGATTTACCTCGTTCGTTATCGGAGGCTGAGGAGGTGGTGATTGAACCTGCACGGGTGCTAGACACACGCTATGATGCTCAGGGTTGTTTGGAAGCGTTAGTTTCTTGGACAGGCTTGCCAGATTATGAGAATTCGTGGGAGAAGGCTACAATGTTACTTAAGCAATTTCCTCATCTGAAGCTTGAGGACAAGCTTCGTTTCGACGCGGCGGGTATTGATAGACCATTAAGAGTATACGTTCGGAAGAGATTGAGAGCAAATGAGGAAGCAGACGTGGCAGAGTGACGTGGAAAGGAAGA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
4823Start:
2943902End:
2948724Strand:
->A01_LTR-Gypsy_17
TGATAGAGTATCGATGTATTAATCAACTGTAACCGTACCTCTCAACTACAAAGACTCGACTCGAGACTCCGTAACTGCCACTCTTGCTCTCACACCCGAGAAACAAGCCCAGACACAATTCTACCAAATTGCATAAGCCCACCTATCCACCCTATGGGTCCTTTTATAGACTAAGGCCCACACCAACTATTATATTGTTTACAAGAATTATTTGAATCAATCCTAAACTCTTTCTTCTTCTTCACGTCTTTCTCATGCCTTCTTCTCTTCCAAGTTATTCTGCTTCTTCTGTCTACGAGTATAAACCCTCCAAGGTATATCAATACCCCCGTTTCGCAGAACTAGCTTGTCCTCAAGCGATGAATCAGGAAACTGCTGTTTCAATTCCACCATACGCATCCAAGTATTCTCATGATCAGGCAAATTACGCCACTTTACCAACACCTCCAAATGACCTGCTTCGTCATAACGACTACTCAATAGCTCCTCCGGTTCCACTACCAAATCCTCACTTGGTGACAAGGTAGGTGGTAAAGGTGTCACCACCTGATTAGCCCCCACCACTGGTTTAAGTTGAGAGACATGAAAAACCGGGTGGATGCGTGATCCTTCGGGAAGTCTCAACCGATAAGCAACCTTCCCAATTCTCTCCAGCACTTCGAAAGGACCATAATACCTTGCTGCCAACTTCTGACATAACCTTCTACTCACCGACTGCTGACGATATGGTCTAAGTTTCAAATAAACCATTGAACCCACATTCAACTCTAAATCCCTTCTCTTCTTGTCAGCATTGTTCTTCATAATACTCTGAGCACGAATAAGATGTTGCTTAACTTCAGCCAACACCCTATCTCTCTCTATCAACATCTCTTCCAACTCAAAGTTATTTGTCGACCCTCGCTCGTAACTCACCAATGCCGGTGGCTCTCTGCCATATACCAGTTTGAAAGGTGTGCATTGCGTCGACTTATGGAAAGAAGTATTGTACCACAGCTCGGCCCAAGCTAAAAATTTTGACCAACTCTTGGGATGAGAGGAAGCAAAACAGCGGAGGTAGGTTTCAAGACATCGATTAATAACCTCTGTCTGACCATCAGATTGAGGATGGAACGCTGTACTGAACCTTAGCCTGGTACCCGAAGCTTTAAAACATTCCTTCCAAAAGCCGCTCAAAAAAATCTTATCTCGATCAGATATTATTGATTTTGGGTAGCCATGCAGGCGAATCACTTCCTGAACAAACTTCTTTGCCACATCTGCCGCTGTAAAGGGGTGCTTCATTCCTATGAAGTGGCTGTACTTGCTTAAGCGATCAACCACTACAAAGATAACATTGATTCCCCCAGACATTGGCAACCCTTCAATGAAGTCCATGGATAAATCCTCCCAAATCTGTGTAGGAAGCTCGATTGGTTGGAGTAAACCCGCAGGAGACCGTGTAGAGTACTTGTGAGTTTGGCAGATTTCACACTCCGCAACATAAGCCTGTACTCTCTGTCTCATTTTGGACCAGTAGAACGTGCTTTTAACACGTTGTAATGTCTTGAGGACGCCTGAGTGGCCCCCAAGTAATCCATCGTGACATTCCTTCAGTATCAATGGAATATACGCTGATTTCGACGGAATGACTAGCCTACCTTTATACAACAACCTTCCTTCCTTCACAAAAAATCCATTCTCCACATCCACATCCACAGTCTTGTCACTGATCATCAGTTTCATCTCATCACTCTCATCAATCTCCTTGTACAAATCCTCAATTTGTAAAGCCTTCGATATTGTCAAGGCCAGTAACTCGAAAGATGAGTAGTTGACAATACGAGACAACCCATCTGCAACTCGGTTCTCACTTCCCACTTTGTACTCAATATCAAACTCATAGCCCATGATTTTGGTCAGCCACCTCTGATAGTCCAACGTCACCTCACGCTGCTCCAGCAGAAATTTGAGACTGCTCTGATCCGTTCTCACCAAGAAACGTCTTCCCAACAAGTAATGTCGCCACTTTTGAATTGACATCACTATCGCCATTAACTCACGCTCATATATCGGCTTCATCTGTTCTCTCTCCGTAAGAGCATGACTAAAGAACGCTATGGGATGTCTGTCCTGCATCAAGACAGCCCCCAGACCATAACCCGATGCATCAGACTCGATGATGAACATCTTAGTAAAATCCGGCAAGGCAAGCACAGGTGCTGAAACCATTGCAGATTTCAGATTGTCGAAGGCAGTCTGTGAAACTGTAGACCATAAAAATTGTTCCTTTTTTAACAGTTCTGTTAACGGCCTTGCTATCATGCCGTAAGCTTGAACGAACTTTCTGTAGTATCCTGTTAAACCCAAAAATCCCCTGAGGTCTTTAACCGTACGCGGATTCGGCCACTGAACCACAGCTGCAATCTTCTGAGGATCAGTTGCCACACCATCACAGGATATTATATGTCCCAAATACTCCACACTGCTCTGTCCAAATGTACACTTCTTTCTGTTCGCAAATAGTTTTTGCTACTTAAACACTTGCAGAACCATTGCCAATTGTTTCTCATGTTCCTCCACAGATGAACTGTATATTAATATGTCATCAAAAAAAACTAACACGAACTGTCTCAGGAACGGCTTGAACACCTCATTCATCAAAGCCTGAAACGTCGCGGGAGCATTTGTCAGTCCGAACGGCATCACAAGAAATTCATAGTGACTGTCATGCGTTCGGAATGCCGTCTTTTCAATATCTTCTTCCTTCATTCGGATCTGATGGTAACCAGACCGTAGATCGAGTTTTGAAAAGATCTTAGCTCCATGCAGTTCATCTAATAGCTGATCAATCATCGGAATTGGATATTTATCAGCTATGGTGGCTCTGTTCAATGCTCTATAATCCACACAGAAGCGCCAAGACTTGTCCTTTTTCTTAACAAGTAGTACCGGACTTGAATAAGGACTGTGGCTTGGTCGTATTGCTCCTGTAGCCAACATTTCCTTCACTGCGTTCTCCATGATTTCCTTATGAGCGTGAGGGTATCGGTACGGTCTCACACTGATAGCACCAGAACCCGGTAACAGGTTTATAGCATGCTCTCTTCCACGTATCGGAGGTAATTCTTTTGGCTCATCAAACACCTCCTCAAACTGCTTCAATACTCTCATCAACTCTACTGGAATTTCAGACTCCGGTTGCATTGTCTTTAAGGACTGTTGTGATGAATGTAACGAAGGATCACCCACTAACGTTACATGTTTTCCATCATGCACAAAAGAGTATTCATGTTTCTCCCAATCGATTTGACACGTCCCTAAGGTTCGCAGCCATTGGACTCCAAGTATCACATCCACTTTACCAAGTTCCAATACGATGAAGTTGGTAATGAACGTAGCTCCTTGCAATGTGATCTCTACATTTTCACACACGCCATAACTGTGTACTGATACCCCAGTTCCCAACAGTATCTCTAATCCCGGTCTTGTTGATGTCTTCAGATGAGCCCTCTGTAACATCGCAGGAGAGATGAAGTTATGCGTCGCCCCACTGTCTAACATCACTACTACAGATTGCTTCTTCAACACTCCACGCAATTTAGTCGTTGTAGGTGATGTCAAGCCCCAAAAAGAATTCAAAGAAATTGCTCTTAACTGAGGTTCCCATACTATATCATCTTCCTCCACGTCAATATGATCTGGATCCATCACTTCTACTTCCATACCATTGAGGACAACTAACACTTGTAGAGAAGCATTCGGACAGAGATGCTGCTTAGACCATTTAGCATCGCATTTAAAACAGAGTCCCAGTCTCTCCTTCTCGGTAATTTGGGCTTCTGTTAAGCGAACTTGTGGTCTTTGAACATTGTTTTGAGTCACCGTCTTCGGTTTCCAGCCGTTTTGACTGTTGTGACTTGTATAAGGTTTCTGTCCTCCTTGATTGTTTCTTTTCGTCAGCTGCATTTCTTTCTTGACAACACTGTGTAAAGAACTTGATTCCATCTGATACGCCGTAGCAATCATCTCTGGAAGGTCAAACGGCTTACACATATTAACAACTTCTTGCATCTCCGGTGTTAACCCATTCATGAAAATCCCTTCAAGTTGACTATCAGTCAAACCCGTCACTTGCGTTGATAAATCTTCAAACTGGTGTATATACTCCGCTACTGATCCCGACTGTCGCAAAGCAAAGAACGGTTGACTCGGATCTCGAATCTTTACTTTACTGAATCTCGCTATCATCCTTTCTTTAAACTCAAACCAGCTTCGAAAAGGTCTTCGATGAACCTCACTGTTAAACCAACTCAACACATCACCACCAAGACTCATTGATACCAAATCTAACTTCGCCGCTTCTCTGTAACCTCCAATTCTGAAATAGCGTTCAGCTAACGCAATCCAACCATAAATGTCCTCACCGCTAAAGATTGGCAACTCAACACGTTTCACAAATCCCTCCCGTGATTCAACCAACACTTCTCTATTCCGGTTCTCCTCCATCCTAAAACTACGGCCAGGTTCCGAGTTCGAAGATCGTACCTGATTCTCGTGTACCGGAACGTTCGGATCTGCGTTTTCAAGATCCTCGATTGAATCCTTTCCGCGATCTTTTGTCTTCTGTAAACCAGCCAGTTTCTCCCTGATCTCCGTCAACGATTCTTGAACCAGCTGATTCGTCTGATCCTGAGCTGCGATATGCTTCTGCATCATCGTCGTAAGCGCGTCTAAGCTGGACGCCTGAATCTGGAGATCCGCCGATTGCGACTGCTTCGGAGGCATCTTCGTCTCGTAGATCTCGCGAATGTGCGATCCAAAACGCTCACGACGCACCAATT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
377Start:
2948725End:
2949101Strand:
->A01_LTR-Gypsy_18
TGATAGAGTATCGATGTATTAATCAACTGTAACCGTACCTCTCAACTACAAAGACTCGACTCGAGACTCCGTAACTGCCACTCTTGCTCTCACACCCGAGAAACAAGCCCAGACACAATTCTACCAAATTGCATAAGCCCACCTATCCACCCTATGGGTCCTTTTATAGACTAAGGCCCACACCAACTATTATATTGTTTACAAGTATTATTTGAATCAATCCTAAACTCTTTCTTCTTCTTCACGTCTTTCTCATGCCTTCTTCTCTTCCAAGTTATTCTGCTTCTTCTGTCTACGAGTATAAACCCTCCAAGGTATATCAGTCTTCCCAGAAGAGACTAGCCGGCTGATCTTCAGAGCTGTGAAGAAAGCTGGTG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1478Start:
3334274End:
3335751Strand:
+>A01_LTR-Gypsy_19
TGATATCTTGCATATTTAGATTGTTTTATCCATTCATTCATAAACATTTTCATCATATAGATTAGGATTTAGACATGTTTAGGTTGCATTTTGCATACATATGTCTCTATCAGGTATTTGAGTACCACATGGAGTTTCTGGAGACATTTGGGTGCATTTGGAGCTCAAAAAGGAGTGTTTAGAGTGGTCATTGGGCGAGCAAGGCATGGAGCGACCAGTCCGGAGCGACACCACCAAGTCGCTCTGACCTCCCTATTGGAGCGACCTTACCAGAGCGACAGGGAGAAGTCGCTCGCGGTTTCATCACTCGGAAACGCGAGAACGAGCCGGAGCGACCTCCCGGAGCGACACCACGAAGTCGCTCGCATCTCACACCCCTCTCGGAGCGACCTCCCAAAGCGACACCCCGAGGTCGCTCGCGTCTCTATGGCGAGACGACACGAAGCGAAGCCTGGAGCGACCTCTCAGAGCGACCCACTGAGGTCGCTCCCGAAGGCCGGAGCGACGTGCCGGAGCGATGCGAGGTCGCTCCGCGCCTATTATCTGCTCGATTTCTATTTTACTTAAGGGTCTTTTGGTCATTTCATTATGCACGTTTTACATTTCTAAAACCTATGTTTTAAACATCTTTTGTAGCCACGAGAGGCAGATTATCTTTTATCTTTGATCTATTGAGAAAGACACAAGAACTCTCTTGAGAAGTTCATCTCTTGGATTTTGATTGTTATGTTCTTGTGTTATTGTTGATTTCTTATCTATTTCTCTACATGATTAATCTGAAATCCAATATGGGTTTAAGAGGAATCATGGAGATTAGTGAGTAATCACCTTTGGAATTCATGGGTTAGGGAGATTAAGGGTGATTAGGTTAGAGCTAGGATGTTTTAGTGTAGATCATTCATATTTCCTTGCTAGTAGAGTAATCATAATGCATCTTCTGAGTTGGCCACTCAGTTGTTGATCCTTAGGCATTTCTCACCCGAAAGGTGTTCGATGAAATGCCCGAGACAACTCTCCTAGGCTTTTAGTATACTTTGCCAAAGACATTTGTTGTTAAAGATGCTAAGATAGCTAATAGACTTGTTAGTAATGATTGCTTTCATATTATTCAACCAAAGACATTTGATGTTTGAGATATGTTAGCAAATGAGCATTCATCTAGACATAGAGCTTGCTTAGAATTGTGTCTAGGCTTAAGGTTGATAGTTTGATTGATCATTTGCCATCCTTAGTTCGATACTTGATCACCCAAGGTCTAATCCCTATGCCCATGAATTCTCTTTTCCCTTAGTCAAGAAAGTATCATTCTGTTATTGCTTTTTAGTTTTAGTCATAGCTTAAAACCCATCTAAATCATTGGTTGCACTTAGATTAAGTGAGTACTTGCATTCTCAGTGCTTTGATATCCCTCAGAACTGGTTCGACAATCTTTTATACTACAACATTTGTTTTAGGAGCCTTGAAAACTCCTAACATCA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Gypsy_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
3393Start:
3335753End:
3339145Strand:
+>A01_LTR-Gypsy_20
ATTGGCGCCGTTGCCAAATTCTGAGTAGATTTGAACATTGAGATTTAGTCACTTGGTTGAGACTAAGTCATTTTTATTTTCTTTTGTTACTGATTCTCTTTCTTCACCTCCCTTTAATCTACAGGTGTATGAACTTGAGGAGCAGGGGTCCATCAAACCTAGTTCCAATAGCTGCAGACATCAGAGCTTTAGAGAGAGAGTGTGCTAGAAATAGAAGAGAAGAAGAGCAACAGGCTCACTTGCAGAGATTGAGTACTGATATGGGAGACATACCTCAAAACCAACAGCGAGCAGCTCGACCCATTGGCACTTACGACCGCCCCAACATTCATGGTCATAGATTGGGAATCCGAGCACCCGCTGTGGCAGCCAACAACTTTGAGATCAAATCAGGACTCCTCAACGTGATCGAGAACAACAAGTATCATGGCTTGGCTCTAGAGGATCCATTTGATCACTTGGACAGGTTCGACAGCTACTGTGGGTTGTCAAAAACCAATGGTGTGTCCGAAGATGCCTTAAAGCTCAAGCTATTCCCTTTCTCTTTGGGGGATAAGGCGCGTCAGTGGGAGAAGTCTCTACCCAGTGACTCCATCACTACTTGGGATGACTGCAAGAAAGCATTCTTGGAGAAGTTCTTCTCTACTTCAAGAACTGCTAAGCTGAGAAACGAGATTTCCAGCTTCCAACAGAAGAACTTGGAAGGCTTCAGTGAAGCCTGGGAGAGATTCAAGGGCTACCAAGCTCAATGCCCACACCATGGCTTTTCTAAGGAGAGCTTGCTGAGCACATTCTACCGTGGTGCTCTTCCTAAGTACAGAGCCAGACTGGATACAGCTAGCAATGGGTTCTTCTTGGGGAGAACTGAAGAGGATGCAGAAGAACTGGTTGACAACATGGTAAAGAGTGATGCAGTCTACAGTGGAGACCACGACAGAGGCAGTAGAACAGATGATAAGCAGACGAGGAAAGAGATCAAAGCTTTGGAAGACAAGATCGACCTACTCATTGCTGAAAAAGCAACCCAAGAGCAAGCTGAAGTTTGTTGGTAACTCCAAGCAGGAAGATCCACTTGCTGTCAATGAGGTTGAAGGTTTGGAAGGTCAAGAGGAGTTGTGTTTCATCAACAACAATGGTAGCTGGTACAAAAAGGAGCCCAACTTTCAGTACAACAACTACCAACAGAAATCCTATCCAAACAACCAACAGAGTGGCTATCCGCCAAGAAACAACCAGCAAGGCAGCTATCAGCCTCAGCAAAACCCCTCGTCTGGTTCCTCTGCTCCTCAAGAGAGCAGCACTGATACCTTACTGAAGCAAATCTTGGAGTCTCAGACTAGAAGTGAGAAGCAAGTTGGTTATGAGTTGAAGAACCTTCATTCCAAGATTGATGGGAGCTACAATGAGCTCAACAACAAATTCTCACACCTTGCTTCTACAGTCAGGAATTTAGAGAATCAATTTGCTTCCATGAACACTCACCAGAATCGCCAGCAAGGATCTCTACCTGGAAAGTCTGACCAAAATCCCAAGGAGGCCAAAGCTATCACCCTTAGGAGTGGTAAGCAGTTACCTCCTAGAACCCTCACCAAGGATGCTGAGAAATTAGGTGAGGGGGTTGCCATCAACATAGATGATGAAGTGGTGATTGTTGATGAGAAGATCAATGACGAGATCTTGGAGAAGATAGTGGAAGCCAAAGGTAAAGGAAAGGTTGGAGAGGAGAAGAAGACAGTAAAGGATGGTGAAGTTGTTACTCCAGCAAGTGAAAGTTCTTTTGTTCCTCCTCCCTATGAACCCAAACTTCCATTCCCTGGTAGATTCAAGAAGCAGCTGCTAGAGAAATACAAAGCTCTGTTTGAGAAGCAAATGAGTGAAGCTCAGGTTGCAATGCCCATCATCGATGCTTTCATGTTGATTCCTCAATACAACAAGTTCCTGAAAGATGTTGTAGCTGCAAAGAAGAAGGAGATGGAAGGCATGATGATTCTTACCCATGAGTGCAATGCCATCATCCAGAGGCTTGATGTTCCAGAGAAATTAGAGGATCCAGGAAGCTTCACACTACCTTGTGCTCTTGGACCTATGGTATTTGAGAAAAGTCTCTGCGATTTGGGAGCTAGTGTCAGCTTAATGCCTTTGTCTGTTGCAAAGAAGCTCGGATTCACTGAGTACAAGAAGTGCAGACTCTCTCTGGTGTTAGCTGATCGTTCAGTGAAGTACCCTGTGGGCATCTTAGAGGACCTCCCTGTGAAGATTGGAAGGTATGAGATACCTACAGATTTTGTGGTACTTGAGATGGGTGAGGAGGCTCAAGATCCATTGATTCTAGGAAGGCCATTCTTAGCTACAGCAGGAGCTATTGTTAATGTGAAGGAGGGCACGATTGATCTCCATTTGGGTAAAGAGAACATCCTCCACTTTGACATCAAGGGGAAAATGAGGAAACCAACTGTGTTCGGGCAAGCCTTCTACATTGAAGAGATGGACACTCCTGCTGATGAGCACCTTGAAGAGTTACCACCTGAGGACGACGAGGAGGGAGCATCTCCCTCTACTCATTCCCTATAGAAGGTAACCCACCACACTCCCTTGTATATACCATTTCATTTTTGCATATTAGTCTTCTTTTCGGTATCTCTCTCTACTTGACGACACAGAGACTGTGTAACTCAAGTTTGGGGGAGGTACCAAGTATTTGATCATGTTTGCTTTGATGTTGTTTCATTGAGTCATGCATGGCATACCTATTTGCATAGATAAAAAAAAAAAAATCAATCATTTAGTTTGCATCATTTGCATTTTTAGGAGAGTCTAGAGCATATAGGTTGCATTCACTTGCATTGGGAGCAATGATTTTGAATGCCTTGTAAAGAACACTACGTTGCACTTGACTAGCTTTTGCACCTCTCAAAAAGACTTGTATGTTTCGAGCCTTGAAAACTCTTCCTGAAACTTGTTGATTGATGAAACTCAGTCTTTGAAGCCAACTACAACCTTATTTGAACTGAACGAACTTAATGCTTCTTGCTCATGGTCCCTTGTGTACTGAGTCATGGCTATACACACTTGAGTTGTCACATCTTTTATACCAATCTTTTTTGACAAACTCCAGTGGTAGACCACTCCCAAAACCTTTTCCTCCTTTTAAGCTTTCATTGTTTGATGAGTGAGGCCTTTTTCGGAAAGTCTTACATGTGCATAATGTTGAGAGTATCGGGAACGACAATGCTTGATCTTCATTCTTGCTAGATTGGACACTCTATTGTCTAGCTATAGGTGGGGGTGAGTGTTGTGATTATGATTTGGGAGAAATGAAAAAGGAAAAGAATAGACTCTTTGTGCTTAAGTGAATTGTTTTATTGGGACCAGTATATAAGCCTCTAGCTCAAG