ID Class Order Superfamily Length Start End Strand View
A01_LINE-L1_1 RetrotransposonsLINELINE-L1439279064279502-
A01_LINE-L1_2 RetrotransposonsLINELINE-L125519968141997068-
A01_LINE-L1_3 RetrotransposonsLINELINE-L124522142542214498-
A01_LINE-L1_4 RetrotransposonsLINELINE-L1146522150182216482-
A01_LINE-L1_5 RetrotransposonsLINELINE-L113129000882900218-
A01_LINE-L1_6 RetrotransposonsLINELINE-L126130712493071509-
A01_LINE-L1_7 RetrotransposonsLINELINE-L117532104453210619-
A01_LINE-L1_8 RetrotransposonsLINELINE-L119437644053764598+
A01_LINE-L1_9 RetrotransposonsLINELINE-L136939099063910274+
A01_LINE-L1_10 RetrotransposonsLINELINE-L123941411564141394+
A01_LINE-L1_11 RetrotransposonsLINELINE-L164842766774277324+
A01_LINE-L1_12 RetrotransposonsLINELINE-L128042778324278111+
A01_LINE-L1_13 RetrotransposonsLINELINE-L19347475734747665-
A01_LINE-L1_14 RetrotransposonsLINELINE-L112047502874750406+
A01_LINE-L1_15 RetrotransposonsLINELINE-L143048092894809718-
A01_LINE-L1_16 RetrotransposonsLINELINE-L153148097894810319-
A01_LINE-L1_17 RetrotransposonsLINELINE-L128748502744850560+
A01_LINE-L1_18 RetrotransposonsLINELINE-L120951339605134168+
A01_LINE-L1_19 RetrotransposonsLINELINE-L181851607465161563-
A01_LINE-L1_20 RetrotransposonsLINELINE-L115952713455271503-

< 1 2 3 4 5 > Total 663


Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

439

Start:

279064  

End:

279502

Strand:

-

>A01_LINE-L1_1

TACATAGTATGAAGATGTAAGGTGAGAGTGGATCTCCTTGACGGATACCACGACTCGGTGTGACTCTTCCTCTAGGAGAACCGTTAATGAGGAAGGAGTATGTAACAGTAGACACGCATTGCATGATCCACGAGATCCATTTGGGATGAAATCCTAGTCTTTGGAACACCAGCCGGATAAACTCCCATTCGAGACGATCATAGGCTTTGCTCATGTCGGTTTTGACCGCCATAGCGCATCTCTTTGCAGCGTCGGACGTTTTGAGGTAATGGAGCACCTCATGAGTGATAAGGACATTGTCCGAGATTGCCCTCCCTGGCACAAACGCTGATTGGTTCTCGGAGACAATGTCTGATAGGAGCGGTTGGAGTCTCTTCGTCAAAATCTTGGAGATGATTTTGTAGTAGACGTTGCAGAGAGCTATAGGTCTATACTCCGT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

255

Start:

1996814  

End:

1997068

Strand:

-

>A01_LINE-L1_2

TTTTTTTTTATCATCAACATAAATAGATTCATATAAACTCTGCAAACCAAACTGGTAGCTCCGCATCCATATGGATATGGATAATAAACGATAGTTGCTTTTTTGCACTACGTGCAAGACTATCCGCCCTTGAATTTTGCGTTCATGGTATATGAATGAACTCTGAACTGTGAAAACTTCTCTTCATGATCTTTATGTCTTTAAAATAATTTACAAATACTGATCAATCTTCCGGTTCCGAAACTATTTTCACTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

245

Start:

2214254  

End:

2214498

Strand:

-

>A01_LINE-L1_3

CGTCTTTCCCATTGAAGAGTTTGTCGTTTCTCGCCTTCCAAATGTACCAACAGATCCATGGAAAGGTATCGAATTGTGGTCTCAGAGGAGCCACCTCTTTTCTCTTCCAAAACAGGAAATTCATGTTTTGATATATGGATGTACTCGGGAAGTAACCCGGAATGGACGGGTAGTCCGATAAAGCCCAAATCTGAAGAGCTGGTGGGCATTCAAAAAGAAGATGATTAATCGACTCCACTGGGCCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1465

Start:

2215018  

End:

2216482

Strand:

-

>A01_LINE-L1_4

AGAGGTTTTGCTGCCATGATACTACGCCATCCATATGATGGTGAGTATGTACGCCGATCTTCTAATGGAGAAGTGTGATTATAGTACCGTCCTTTCAAAACACGTGCTAATAAGGAGTCCGGAAAATGAATTAGTCTCCACAATTGTTTTGCAAGAAGGGCGATATTGAAGTCATGGAGATCTCGAAATCCTAGTCCCCCCAAATCTTTGGGGGTACAGATCTCGTCCCATGCAATCCAATGTAAGCCTCTGCTGTTCTGGTTTGAGCTCCACCAAAAATTAGATGTTGTGCTCCTTAGTTTATCGGTAATGCCATGGGGAAGCAAGTAACACGACATCACAAAGGTCGGAACTGCTTGAGCCACAGATTTGACTTGAACTTCTTTCCCTCCTTTAGAGAGGAGTCTCGATGACCAATTGTTGACACGACCATTAAACCGATCTTGTACAAAGGAGAACACTCTCATTTTTGAGCCACCGATTTGTTCTGGTAATCCAAGGTACATCCCCATGCCGCCTTCTGAAGAGAATCCTAAGGCATCTTTTATATCTTGCTTCCGAGAACTCTCCACTCGGTTTCCAAAAATTATTGATGATTTTGACGCATTTAGTCGTTGTCCAGAAGCTTTCCCATAAATATCTAGAATATCCATGATCTCCTTGCATTGGCTTAAATCCGCTTTACAAAAGAAAAGACTGTCATCTGCGAAAAGAAGATGAGAGATCCTTGGGCTCGCCCTAGCAACACGAATTCCTAAAATTTTCTTTTCCGCTTCCGCTCCATTCAAAAGTGAGATCAAAGCCTCCGTACACAAGATGAATAAAAAAGGGGAGAGTGGGTCTCCTTGCCTCAACCCTCTCTTTGGTAGGATTCGCCCTCTTGGTTGCCCATTGACTAAGACTTGATATGTGACCGACGTGACACAACACATAATGAGGTCAACCAGTCTTTCATCAAAGCCCATCTTCAGCATCAAAGTTGCTAAGAAGCTCCATTCCACTCTATCGTAAGCTTTACTCATATCTGTTTTAATAGCCATGAAGTCTTCCCTACATCGCTGGTTCGTCCGTAGGGCGTGAAAGTTTTCTTGTGCTATCAGGATGTTATCAGTAATCAAACGTTTTGCCACAAAGGCCGATTGTGTCTCCGAGATCAAATGCGGAATAACTCTCTTTAGTCTCTTGCAAAGAAGCTTAGATATAATCTTGTAGCTAACATTACAAAGACTGATAGGTCTAAATTCAGTCATGTCTCGAGGTTTCTTCTTTTTTGGGATGAGGCATATATTCGTCTGGTTCAATAATGGATCAAAACTGCCTGTCGCAAAGAAGTCTCGGACAAGTCTAATAATGTCTTGCCGCATTTCCCGCCAGAATCTCTGAAATAATTTACTAGTCATGCCATCTGGACCGGGAGCTTTATCTGGATTGATATCGAAGAGAGCTTTTCTAATTTCTTGTTCCG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

131

Start:

2900088  

End:

2900218

Strand:

-

>A01_LINE-L1_5

AAACCTTATTTTTGTCAATAATGCATGAACAAATGCCCACTCAACTCTATCATAGACTTTGTTCATATCTATTTTCACCACTATAAATTTATTTTGACAGGATTTGTTTGTTCTCAAAATATGAAACATTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

261

Start:

3071249  

End:

3071509

Strand:

-

>A01_LINE-L1_6

TTTTTACAGCAAACATTTACAGATTCATGTAGATTCTGTAAACCAAGGCGGCAATTCTGCATCAATGTGTATGACGAAAAACGACTGAATTCGAACACTGCGTACCAATCGATCCGTTTTTGTGTTTTCTGTCTTAGGTACATGAATGATGCTTGAGTTAGTGAAGTTTCTTCTCAGAAGCATAATGTCTTTTAGGTAGCTTTGAAATGCTGGCCATTCATTTGATTTTGAAACCATCTTTACAGCTTGGAAACAATCCGT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

175

Start:

3210445  

End:

3210619

Strand:

-

>A01_LINE-L1_7

CTATGAAGTCCCATTCGAGCCGGTCGTAGGCCTTGCTCATGTCGGTTTTAACCGCCATTGCGCATCTTTGCTCTGCTTTGGAGGTCTTCAAGAAGTGAAGAACCTCATGCGTTATGAGCACATTATCGCCAATTGCTCGGCCTGGCACAAAAGCAGACTGGTTTTCCGCAATAAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

194

Start:

3764405  

End:

3764598

Strand:

+

>A01_LINE-L1_8

ATATAAGCTTTTGCGACGCAGTTTCGTCAACTCAGATATTGTTCATGTTTCTAGGATGGAAAACATAAGGGCGGATAGCTTGGCACGTAGTGCTCGGAAACAACCGTCTTTCGTCGTGCACATGGACGCAGAATTACCACATTGGTTTACAGTGTCCACATGAGTCTGTAAATGTCTGCTGTCAAAAAAAAAGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

369

Start:

3909906  

End:

3910274

Strand:

+

>A01_LINE-L1_9

TGGCAACTGATAACATGTCAGGCGGCAGTGACGAGAAATCTAGTAAGAAGGAATATGAGATGCGATAATTATTGCACAAGATGTGGGAAAACAGAGGAATCTGTAACTCATACTATATTCGAATGCCCTCCTGCTCTGCAAACATGGGCCTTATCGACAACTCCCACAAGTCCAGGTACATTTCCAGTGTCAAGCGTCTACACAAACATGGATTACCTATTCTGGAGGAAGAATAATATCATAGAGCCAGATCAAGACAGGGATCCTTATCCCTGGATAATATGGTATATTTGGAAGGCTCGAAATGATAAACTTTTCAGGGGAATAGACAGAGACCCTTTGGAATTAGTTCGATACGCAGAAAGTGAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

239

Start:

4141156  

End:

4141394

Strand:

+

>A01_LINE-L1_10

ATTGCTCTCATTTGGTGAAGATAGTTTCAGAACTAGAAGAATCGTCAGCATTTGCAAGTTATTTAGAAGACATCAAGATCCTGAAGAAAAAATTTCTCATACCAAGGATACAAAATTTGAGAGCGGATAGTCTAACACGCAGTGTTAGGAAGCAATCATCTTTCATCGTTTATATAGATCAAGATTTTCCGATTTAGTTCACAGAGTCAGTATGAATCCGTAGTTGATGACAAAAAAAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

648

Start:

4276677  

End:

4277324

Strand:

+

>A01_LINE-L1_11

TGCAGTTTTTGCCATCCATCCCGATAAGGCCCCAGGCCCGGATGGTTTCTCGGCTAGTTTCTTTCAATCCAACTGGGACTCTTTCGGCCCTGCGATCACCAAGGAAATACAAGAGTTTTTTGTTTCAGGCGATCTACCATGCTCCATAAATGAGACTCATATACGACTCATCCCAAAGATTCAAAGTCCTAAGCTTGTCTCCGACTACAGACCTATAGCGCTTTGTAATGTCTATTACAAAATCATTTCGAAGATCCTTGCTCTACGACTCAAACCAGTACTACAAGACATTGTTTCTGAGAATCAATCCGCCTTTATACCTGGAAGAGCCATCTCGGATAACGTTCTCATTACCCATGAAGTCTTGCACTATCTGAAAATTTCTGGAGCTATAAAGAACTGTTCAATGGCAGTAAAGACAGACATTAGTAAGGCTTATGACAGACTTGAATGGTCTTTCATAAGGGCGGTTTTGGAAAGAATGGGGTTTAGCGATACCTGGATCGGCTGGATTTTGCAATGCGTTTCCACCGTGTCCTACACTTTTCTCCTAAACAATGAAGCTGTGGGGAGAGTCACGCCACAGAGAGGCATTCGGCAGGGAGATCCTCTCTCACCTTACATCTTCATCATCTGTGGGGAAGTCCT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

280

Start:

4277832  

End:

4278111

Strand:

+

>A01_LINE-L1_12

AGTGCTCACTAGGTTTTGGTGGGACTCAAAGGAGGGAGAAAGAAAGATTTGCTGGATATCCTGGGACAAACTAACGCAACCTAAGAGCATCGGCGGCTTGGGCTTTAGAGACATCCAAACTTTCAATCACGCCCTCTTGGCAAAGATCTCGTGGAGAATTATAACCAAGCCAGATTGCCTTTTAGCTCGAGTTCTGCTGGGGAAGTACTGCCACAAAGTCTCTTTCCTCAAGACTAATCCCTCTTCCTCCATATCGCATGGATGGAGAGGCATCCTTCTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

93

Start:

4747573  

End:

4747665

Strand:

-

>A01_LINE-L1_13

TCGGAAGTTAGTCATATATTCAATAGCCTAAATTAGCGTCTCTATCTCTACATGCAAAGATGAGGAATTGTGCCTCATACTTTTGGCCTCCAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

120

Start:

4750287  

End:

4750406

Strand:

+

>A01_LINE-L1_14

ACAAATATGAATTATTTATTTTAGGAGATTCCAAAAAATATGAAATAGTTTTTCCATGAATTATACGGTATACATAGACAAATAGAAACAAAATAAATATTTAATAATAAAAATCGGAAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

430

Start:

4809289  

End:

4809718

Strand:

-

>A01_LINE-L1_15

AAACTCATACTAACTTTGCAAACCAAACTGATCATCCATGTGAACGACGAAAAACGATTGTTTTATGGCGCTGAGTGCTAGATTATCCGCTTGTAAATTATCCGTCTGAGGTACATGAATGATCTCAGAGCTGAGGAAACTTATTTTTAAAGTTTTTATGTCTTCCAGATAACTTTCAAACCCCAGTCATTCTTCTGGTTCTAAAACCATCTTCACCAATTGAAAACAATCTGTAGCAAACGTGACCTGAAACTGGCGTAAGTTCTTCATACACTCCATTGCCCATATCAGCGCTTCCATCTACAAATGTAGAGGTGAGAGACTTGCCCGAATGTTTTTCCCCTATCAATCCATCAAAACCCTCGAGAGTGCTATACCAACCTTGCTCTGAATAAGTCTCCTTATCTTTCCACGAACCGTCGATAAAACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

531

Start:

4809789  

End:

4810319

Strand:

-

>A01_LINE-L1_16

TGTGCCTCAACCCAAAGTGTTGATTATGTTTCCGCTAGATTGAGCGTGTCTCTGGAATCAATGTCCAAATTACTAAAAACTTTGTTATTTCTTCATTTTCAAATGTATCATAATATCACCGCAAAGTGATGATCTTCCATTTTCGGGAAGACTCTCCAAAAAAAGATGATCCATATTTGTAAAGAGAGCACTAGTAGGAAAAATAGCTGGGTTTGATAGTATTTTCGATAACGCCCAAACTTGACGCGTTGGAGGGCATTAAAAACACATGATTTCTTGATTCCTTATCAGCTCCGCGTCTAGCCCAACATATATCTCCTTGTATTCCTCCTGCTTTCAAATTTTTTTTTACTTCTATGCACCATGATACTATTTGCCATAAGAAATGTTTTATCTTCGGAGACATCATACCTTCCAGCAAAACGTTTTTAGGATATCCATTATGGGATCAAAACTTTCTTGTGGTTTTACTTTATCCGGATAGACCCGTTCTAATTGATATTCTGATTTAATGATGTATTTCCCATTATT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

287

Start:

4850274  

End:

4850560

Strand:

+

>A01_LINE-L1_17

TGTGGAGAAGCAGAGGAGACTGTCACACATGCAATTTTTGAATGTCCACCAGCTCTTCAAGTTTGGTCTTTAGCTTCGACTCCGACAAGCCCGAACATCTTTCCTGTATCAAGCATCTACACGAATATGGACTATCTCTTTTGGAGGAAAAATAGCTTTCTTGAGCCTGATCGTGATAGGGACCCTTATCCCTGGATAATATGGTACATTTGGAAGGCTAGGAATGAGAAACTCTTCAGGGGCTTAGATCGAGATCCTTTGAAGTTAGTCCGACATGCGGAGAGCGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

209

Start:

5133960  

End:

5134168

Strand:

+

>A01_LINE-L1_18

GTGCAAAAGAAACAATTAACCAAACGATTTTTACATGTCCTCCTGCAATGCAATATTGGGCCTTATCTACTATTCCATCAGCTCCAAGGATTTTTGCTTCACAAAATCTATACACGGATATGGATTACCTTCTTTCAAGGACTAATAGTGAAAAACTTATAGAGAAATCAACCCGATATTTTCCTTGGCTTATATGGTATATCTGGAAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

818

Start:

5160746  

End:

5161563

Strand:

-

>A01_LINE-L1_19

TTGACTTTCTGGCCTGACAGAGCTTCATAATCCTGCAGGAGTTTTGACAGTGCGTGGCAGTTTTCTGGAGTCGAATGGCAGAACATCATTGTATCATCTGCAAAAAGCAGGTGGTTGATACGAGGACTACCCCTTGCTACTCGGATACCTTTTAAAGACCCTTCTCTCCCGGCTTTTCTGCAGAGACCAGAGAGGATCTCGCCACACAAAATAAAGATATAGGGGGAGAGTGGATCTCCCTGTCTTATTCCTCGGTAAGGTTTCACTAATCCGTAGACTGTGTCATTAATTAGGAAAGAGTAGGAGACTGACTGGATGCATTGCATGATTAGATTAATCCATTTGTCGTGAAAACCCAACCTTTGTAGGACCTCTGATACAAAAACCCACTCAACTCTATCATATGCCTTTGACATATCCATCTTTACGGCCATTGAGCAGTTGATCTGAGCCTGAGATGTTTTGAGATAATGGAGCATTTCATGAGTGATTAAAACATTGTCAGTTATTGCTCTTCCAGGTATGAAGGCTGATTGATTTTCGGAGATGATCGAATCCAGAACCGTCTTCAGGCGAAGTGACAGAAGCTTGGAAATGATCTTGTAGAGGACGTTACAGAGAGCTATTGGACGGTAGTCAACGACTTTCTTTGCATCTGAGGTTTTTGGAATGAGCCTAATGTGAGTGTGGTTCAATGTAGGGGGCAAGACTCCTGTTGAGAAAAACCTCTGAACTTCAAGAACCACTGATGAACCCACCACTTCCCAGTGAGATTGGAAGAAACTGGCGGAAAAACCGTCAGGGCCCGGGGCCTTGTC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

159

Start:

5271345  

End:

5271503

Strand:

-

>A01_LINE-L1_20

TTGTTGCCAACAATAATTATATTGAAGCTAAAACTTAGATTCAGAAATTAGCTAATTAAATTGGTGAAACATAATCAAGATAAAACATAGCTGATGGAAAACTTGGAGCACCTCCCTCATGCAAGCTATTAGTTAGAACTTAGAATAGTTGTTTCTAGT