TBGR-Browse-Bra-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	110	23948891	23949000	+
A02_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	89	3493853	3493941	+
A02_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	109	15096754	15096862	+
A02_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	87	23091568	23091654	-
A02_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	101	29997851	29997951	-
A03_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	87	2611474	2611560	+
A03_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	82	11841562	11841643	+
A03_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	82	26444082	26444163	-
A03_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	150	29569101	29569250	+
A03_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	133	30802735	30802867	+
A03_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	82	34337761	34337842	+
A04_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	124	12733988	12734111	-
A05_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	88	6234485	6234572	+
A05_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	146	11347794	11347939	+
A05_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	92	17774873	17774964	+
A05_LINE-L1-Tx1_16	Retrotransposons	LINE	LINE-L1-Tx1	94	23076822	23076915	+
A05_LINE-L1-Tx1_17	Retrotransposons	LINE	LINE-L1-Tx1	112	23107872	23107983	-
A06_LINE-L1-Tx1_18	Retrotransposons	LINE	LINE-L1-Tx1	82	17657975	17658056	+
A06_LINE-L1-Tx1_19	Retrotransposons	LINE	LINE-L1-Tx1	102	18182655	18182756	+
A06_LINE-L1-Tx1_20	Retrotransposons	LINE	LINE-L1-Tx1	136	23634269	23634404	+

Brassica rapa (Chiifu_V3.0)

ID:

A01_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

23948891

End:

23949000

Strand:

+

>A01_LINE-L1-Tx1_1

TATAAAATTATTTCGAAGGTTCTGTGTCAGAGATTGAAGATATGTCTACCTTCTCTTATTTCAGAAACTCAGTCAGCTTTTGTGCCAGGAAGGTTAATCTCTGATAATAT

Brassica rapa (Chiifu_V3.0)

ID:

A02_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

89

Start:

3493853

End:

3493941

Strand:

+

>A02_LINE-L1-Tx1_2

TCTCTACTTCTCTCTCTCTCTTTCTCTCTCTGTTTGATTATGGGGAAAGTATGGGAGAAAGAGAGGAGAGAGCTATGTAAGACTTTTTT

Brassica rapa (Chiifu_V3.0)

ID:

A02_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

109

Start:

15096754

End:

15096862

Strand:

+

>A02_LINE-L1-Tx1_3

TCCCCAAGAAGACTGATGCAAGTGAGATCAAAGACTATAGGCCCATAGCATGCTGCAATGTGCTCTATAAAGTGGTATCAAAGATTCTGGCCAACAGGTTGAAGGGGTT

Brassica rapa (Chiifu_V3.0)

ID:

A02_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

23091568

End:

23091654

Strand:

-

>A02_LINE-L1-Tx1_4

GAAAATCACCTTCAGCCTGTTAGCAAGGACTTTGGAGATCACCTTGTACATGAGGTTACAACAGGCAATAGGCCTATAATCTTTCAT

Brassica rapa (Chiifu_V3.0)

ID:

A02_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

29997851

End:

29997951

Strand:

-

>A02_LINE-L1-Tx1_5

ATTGTGAAAACACCTCCATCGCCAATACAAATAGATAGGGTGAAAGTGGATCACCTTGTCTAAGACCACGTGAGCTTTGAAAATAACCACTTGAGCTGCCA

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

2611474

End:

2611560

Strand:

+

>A03_LINE-L1-Tx1_6

CCATTCATCCTGACAAGGCCCCGGGACCTGACGGGTTCTCAGCCGGATTCTATCAATCCTTTTGGGATGTAATCGGAGAGGATATTT

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

11841562

End:

11841643

Strand:

+

>A03_LINE-L1-Tx1_7

TGGATGAGATTATGAGAACAATGTTTAAACTGAACCCAAACAAAAGCCCAGGACCTGATGGTCTCACTTCTCGGTTCTATAG

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

26444082

End:

26444163

Strand:

-

>A03_LINE-L1-Tx1_8

ATATTATCAGATATTAACCTTCCTGGCACAAAAGCCGACTGGGTTTCTGAGATGAGAGAAGGTAAACATATCTTCAATCTCT

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

150

Start:

29569101

End:

29569250

Strand:

+

>A03_LINE-L1-Tx1_9

TCCTCTCTTTTTATTTCCTTGTTTCTTGTTTGAGGTTGTTTTGTTTGTTTGTTTCGCTCTAATAAGTTGCTAAGCAACATGTAAACTCTTGAAAATGGTATGAAATTTAACATGATTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

133

Start:

30802735

End:

30802867

Strand:

+

>A03_LINE-L1-Tx1_10

CCATTAGCTTATGTAACGTCAGCTACAAGATAATCTCTAAGGTCTTATGCCAAAGACTAAAGAAAGTGCTACCAGGATTGATATCAGAGACTCAGTCAGCCTTTGTTGCTGGGAGACAGATCTCTGATAACAT

Brassica rapa (Chiifu_V3.0)

ID:

A03_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

34337761

End:

34337842

Strand:

+

>A03_LINE-L1-Tx1_11

TGCCAAATAATAAGTCCCCAGGGCCAGATGGATTCACAGCAGAATTTTTCAAAGCCTCCTGGTCGATAATTGGTAAAGACTT

Brassica rapa (Chiifu_V3.0)

ID:

A04_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

124

Start:

12733988

End:

12734111

Strand:

-

>A04_LINE-L1-Tx1_12

AGTATACTCTTTAACCTATTTGCCAAAATCTTCGAAATCAGCTTGTATAAGACGTTGCAACAGGATATAGGCCTGTAATCCTTCATCCCTTTTGCTTCTGTCTTCTTTGGGACCAGTGTTAAGA

Brassica rapa (Chiifu_V3.0)

ID:

A05_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

6234485

End:

6234572

Strand:

+

>A05_LINE-L1-Tx1_13

CATGAAGGACTACAGGCCAATCTCGTGCTGCAATGTATTATACAAAATAATATCAAAGCTCCTGGCAAACAGATTGAAGGGTATTTTG

Brassica rapa (Chiifu_V3.0)

ID:

A05_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

146

Start:

11347794

End:

11347939

Strand:

+

>A05_LINE-L1-Tx1_14

AATTGAGGCCTATTAGTCTTTGTAATGTAGGGTACAAAATTATTTCGAAAGTTTTATGCCAGCGGCTAAAAATTTATCTTCCTTGGCTCATTTCCGAAACTCAGTCGGCTTTTGTGGCTGGAAGGTTGATCTCTGATAATATTCTT

Brassica rapa (Chiifu_V3.0)

ID:

A05_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

92

Start:

17774873

End:

17774964

Strand:

+

>A05_LINE-L1-Tx1_15

CTGTATTAATTAATGGAACTCCATATGGTGAGTTTCAAGCCTTCAAGAGGAATAAGACAAGGATATACGTTATCTCCATATTTATTTCTTCT

Brassica rapa (Chiifu_V3.0)

ID:

A05_LINE-L1-Tx1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

94

Start:

23076822

End:

23076915

Strand:

+

>A05_LINE-L1-Tx1_16

TGTTTAAAATGCCATCAAACAAATCTCCTGGACATGATGGATACATCACAAAATTCTTCAAAGCAGTTTGGCCAATCATCGGAGAAGATATTGT

Brassica rapa (Chiifu_V3.0)

ID:

A05_LINE-L1-Tx1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

112

Start:

23107872

End:

23107983

Strand:

-

>A05_LINE-L1-Tx1_17

AGAGAGAGAGAGAGAGAGAGAGAGTTGTATAAAAGAATTTGGTGACGTGGATTTCAACTTTTTTTTTTGATAACCAAATTTCAACCTTTTACATGTGGGTTTAAATTATGTT

Brassica rapa (Chiifu_V3.0)

ID:

A06_LINE-L1-Tx1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

17657975

End:

17658056

Strand:

+

>A06_LINE-L1-Tx1_18

AGAGATTGAAGATATGTCTACCTTCTCTTATTTCAGAAACTCAGTCAGCTTTTGTGCCAGGAAGGTTAATCTCTGATAATAT

Brassica rapa (Chiifu_V3.0)

ID:

A06_LINE-L1-Tx1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

102

Start:

18182655

End:

18182756

Strand:

+

>A06_LINE-L1-Tx1_19

TCCCAAAGAAGATTGACTCAATGGAGATGAAAGACTTTCGACCGATTTCGTGTTGTAATGTCTTATACAAGGTTGTTTCAAAGATTTTGGCTAACAGATTGA

Brassica rapa (Chiifu_V3.0)

ID:

A06_LINE-L1-Tx1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

136

Start:

23634269

End:

23634404

Strand:

+

>A06_LINE-L1-Tx1_20

GACCTATAAGCCTGTGTAACATTGCTTATAAGATAGTTTCAAAGCTTCTTAGCAAGCGTCTTAAGAGTGTACTACCTGATTTAATAACAGAGACTCAAGCGGCTTTTGTCGAGGACAGGCTTATCTCAGACAACAT