ID Class Order Superfamily Length Start End Strand View
B2_SINE_1 RetrotransposonsSINESINE11645998954600010-
B2_SINE_2 RetrotransposonsSINESINE9947675684767666-
B2_SINE_3 RetrotransposonsSINESINE1034931255549312657+
B3_SINE_4 RetrotransposonsSINESINE1172830810028308216-
B5_SINE_5 RetrotransposonsSINESINE931614940116149493-
B5_SINE_6 RetrotransposonsSINESINE962936499929365094-
B5_SINE_7 RetrotransposonsSINESINE1016685688766856987-
B5_SINE_8 RetrotransposonsSINESINE1176827387868273994+
B6_SINE_9 RetrotransposonsSINESINE1141925464119254754-
B6_SINE_10 RetrotransposonsSINESINE1506034435660344505+

< 1 > Total 1


Brassica nigra (Ni100_V1.0)

ID:

B2_SINE_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

116

Start:

4599895  

End:

4600010

Strand:

-

>B2_SINE_1

AACCAGGAAGTTCGACCTTCGACCCTAATCTCGCTAGGCCCGGAGTCAGCCTTTATCTGTACCTGTTACGGTCCTGGACACTCCTCCCCACCCGAGACTCGAACTGGTGACCTCTC

Brassica nigra (Ni100_V1.0)

ID:

B2_SINE_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

99

Start:

4767568  

End:

4767666

Strand:

-

>B2_SINE_2

AACCAGGAAGTTCGGGCCTTCAGTCCTAATCTCCCTAGGCCCGGAGCCAGCCTTTGTCTGTACCTGTTACGGCCCTGGACACTCCTCCCCGCCCGGCGA

Brassica nigra (Ni100_V1.0)

ID:

B2_SINE_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

103

Start:

49312555  

End:

49312657

Strand:

+

>B2_SINE_3

GAGAGGTCACCAGTTCGAGTCTTGGACGGAGAGGAGTGTCCAGGGCCGTAACAGGTACAGACAAAGGCTGGTTTCGGGTCTAGGGAGATTAGGGTCGAAGGCC

Brassica nigra (Ni100_V1.0)

ID:

B3_SINE_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

117

Start:

28308100  

End:

28308216

Strand:

-

>B3_SINE_4

AACCAGGAAGTTCGGGCCTTCGGCCCTAATCTCTCTAGGCCCGGAACCAGCCTTTGTCTGTACCTGTTACGACCCTGGACACTTCTCCCCGCCCGAGACTCGAACCGGTGACCTCTC

Brassica nigra (Ni100_V1.0)

ID:

B5_SINE_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

93

Start:

16149401  

End:

16149493

Strand:

-

>B5_SINE_5

AACCAGGAAGTTCGGGCCTTCGGCCCTAATCTCCTTAGGCCCGGAGCCAGCCTTTGTCTGTACCTGTTACGGCCCTGGACACTCCTCCCGCCC

Brassica nigra (Ni100_V1.0)

ID:

B5_SINE_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

96

Start:

29364999  

End:

29365094

Strand:

-

>B5_SINE_6

GGCCCTAATCTCCCTAGGCCCGGAGCCAGCTTTTGTTTGTACCTGTTACGGCCCTGGAGACTCCTCCCCGCCCGAGATTCGAACTGGTGACCTCTC

Brassica nigra (Ni100_V1.0)

ID:

B5_SINE_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

66856887  

End:

66856987

Strand:

-

>B5_SINE_7

GATCTTCGGTCCTAATCTTTCTAGGCCCGGAGCCAGCCTTTATCTGTACCTGTTACAGCCCTGAACACTCCTCTCCGCCCGAGACTCAAACTGGTGACCTC

Brassica nigra (Ni100_V1.0)

ID:

B5_SINE_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

117

Start:

68273878  

End:

68273994

Strand:

+

>B5_SINE_8

GAGAGGTCACCAGTTCGAGTCTCGGGCGGGGAGGAGTGTCCAGGACCGTAACAGATACAGACAAAGGCTGATTCTAAGCCTAGAAAGATTAGGGCTGAAGGCCCGAACTTCCTGGTT

Brassica nigra (Ni100_V1.0)

ID:

B6_SINE_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

114

Start:

19254641  

End:

19254754

Strand:

-

>B6_SINE_9

AACCAGGAAGTTCGGGCCTTCGACCCTTATCTCCCTAGGTCCGGAGCCAGCCTTTGTCTGTACCTGTTAGGCCCTGGACTCCTCCCCGCCCGAGACTCGAACTGGTGACCTCTC

Brassica nigra (Ni100_V1.0)

ID:

B6_SINE_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

150

Start:

60344356  

End:

60344505

Strand:

+

>B6_SINE_10

TAGTTCAACTGGCAGCACCTCAGGCATTTGTCTGAAAGGTCACCAGTTCGAATCTCGGGTGGGGAGGAGTATCCAGGACCGTAACAGGTACAGATAAAGGCTGGCTCCGGGTCTAGAGAGACTAGGGTCGAAGGCCCGAACTTCCTGGTT