ID Class Order Superfamily Length Start End Strand View
B1_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA107150169150275-
B1_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA105150288150392-
B1_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA180184249184428-
B1_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA159289703289861+
B1_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA282347505347786+
B1_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA289738749739037+
B1_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA270815565815834+
B1_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA171891483891653-
B1_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA89916629916717-
B1_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA10811468971147004-
B1_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA16719021321902298-
B1_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA14019095671909706-
B1_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA28921254872125775-
B1_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA8722221962222282+
B1_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA20822229302223137+
B1_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA20822888982289105-
B1_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA18125895492589729-
B1_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA10828253842825491+
B1_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA16033885363388695-
B1_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA18535537683553952+

< 1 2 3 4 5 > Total 121


Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

150169  

End:

150275

Strand:

-

>B1_SINE-tRNA_1

AATGCTGGATAACTATCTATTATAAAATATGAGAAATTTTATAGATGTATTTGCAGCCGACAATTTTATCTGCTTTCTAAAGATTCACGTCTGAATACAACACCTAA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

150288  

End:

150392

Strand:

-

>B1_SINE-tRNA_2

ATCTCTTGTAATTTTTTTTTTCCGTTAATTCGCATTTTCTAGGATTCGAAACTAAAACATTCTAATGTACAAGCATTAATGAACCATTATTCAAACTATTGAACT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

180

Start:

184249  

End:

184428

Strand:

-

>B1_SINE-tRNA_3

AATTATATAGAGGTATCCTGGCTCCACAGAAGTGGTCAAGACTAGTAACGTATTGCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCTCCAGCGGTCGGAATTCAAACCCAGGTGGCAGAACTCACAGCTATAAGCCCTTTACCACAAGAACTAGAAGCCCCGGTTA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

289703  

End:

289861

Strand:

+

>B1_SINE-tRNA_4

GAGATCTTCAGAATAGTACAAGAAACACCAACGATCATATATATTTTATAGAGACTAAATTTGATACAATAAAGTCGTGAATATTCATACAATTAGTGAAATTCTAAGATGTAAAATCATTATGCAATATTTTTCATAGTTTTTTATAGAATAATTCAC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

282

Start:

347505  

End:

347786

Strand:

+

>B1_SINE-tRNA_5

GTGAAATTACTTTTGGTTTGGTGGTTTAACTAAGAATTTATTAATGTTTCCACATCAGGAGAGTTGGATTTCGAGTCTCGGACAAATAAAATTATACAAATTAATATAAAAATTATAAGGGATCTTTAGAATGGCACAAAAATACAGCCAACCATGGATCTTATAGGACGGTTCATGATGGTGCAGTTAGACGTGAATTTTTATAAGATACATAAAATTGTCGATTGTAGAATCGTCTTTAATATTTTTTCATTGTTTGTAATAACATAATTATCCAGCGCT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

289

Start:

738749  

End:

739037

Strand:

+

>B1_SINE-tRNA_6

GTAGAAGCGTCATTAGTGCAGAGTGGTTTGACTAAGATTCATTAATGATCTTACACTAGAAGATTTAAGATTCACCCAAAAAAATCGTAAATTATGCAGAATTATAGAGAAAAAGGTTACAAGAATTCTTCAGCATGGTGCACAGGAAGTATCATCGAATGTGAATCTCATATGGCGGTTCGGAATGATGCAATCAGACATATATTCTCATAAGGTGGTATAATTGTTGGTCGTACAATCGTCTATGTAATATTTCTCATTTTTGTATTAGTATAATTAATCAGACGTT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

270

Start:

815565  

End:

815834

Strand:

+

>B1_SINE-tRNA_7

GCACCATGGTGTAGTGGTCAAGGTTTAAATATTTCCACACTAGAGTTCGATTCTTAGAAGAAACACAATTTCTTGCAGATAACAAGATGTAAGCTTTTCGGAGATTTCAGCATATTGTATATACAGTCGTTCATTGTGGTCGTGTATTGCAGAGAGAACTCCTTTATTGAGGATGTCATATATAAAAAACTGTTCGTTGATCCAAGTGTTATGGAAAAGAAATACATCGTAGAATCGTTGTCGTAAAGCTGTTCATCGTATTCGCATATG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

171

Start:

891483  

End:

891653

Strand:

-

>B1_SINE-tRNA_8

TAACCTTGGGTTTTCCAAAGGCTTTCTAGGCCCAAAGACTAATCCCAAGAGACCCACGGCACTCTACGTATTCTTACCATTTAAGGCATCCCGGGTAGCCAGCGCGAATCGAACCCAGGGCCGTACTTACAGCTGCAAGCCGTACACCACTAGACCAACGCGAGCTGGTTA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

916629  

End:

916717

Strand:

-

>B1_SINE-tRNA_9

TATTCTGACCCCACATAAGTGGTCTATACTAGTCACGTATTGCCACTTGTCGGTTCTCTGTCCCTAACGATACCGCAATGTTAATTTTC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

108

Start:

1146897  

End:

1147004

Strand:

-

>B1_SINE-tRNA_10

CCGGAGATCCGGAGGGACCATGTGAAAACCCCGGTGGCCAACGCGGATCGAACCTGCGAGGAGCGTATTGGATTTTCTTCCTCAACTACCCTAGGCCAACCCGTGTTG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

1902132  

End:

1902298

Strand:

-

>B1_SINE-tRNA_11

CTTTCTCCAAAGCAGACAAACACAAACGAACAGCTCTGTCTACACACTCTAGAACCTTCGATAAATTTACAATTTATAATCTGCAAAAAATTGTATAACCTGAAATTCAAGCCCAAAATATGGGTGTGTAAGCCTTTAATAACTAATATAGGATAAGTTGCTTTCAC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

140

Start:

1909567  

End:

1909706

Strand:

-

>B1_SINE-tRNA_12

TATTAGGCAGTTCAGGTCAAACTCTAATTTCCACAGACCCGAAATCACAATATGTAATATTAGTTTCGTCCCAGAAATCACTCGAACTGGGAACCTCTGACACAATAGCCAGTGTCCTTTCCATTTGAGCTAATGACCTC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

289

Start:

2125487  

End:

2125775

Strand:

-

>B1_SINE-tRNA_13

AACATCTGATTAATTATGTTGTTACAACGATGAGAATATTACATAGACGATTTTACAGCCGACAATTCTACCACTTTGTGAGAATACACGTCTGACTGCATCACTCCGAGTCATCCTATGAGAACCATGTTCGATGGTACGTCCTGCACCAAACTGAAGATTTCTTGTAACCTATTTCTCCATAATAGACATAATTTGATATTTTTTGGAATTTGAACCCCAGACCCCCGGATGTAGAAACACTAATAAACCCTTAATCAAATCAGTGGACGACGAAGGGGACTTCCAC

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

87

Start:

2222196  

End:

2222282

Strand:

+

>B1_SINE-tRNA_14

GAATAAACGCTTGAGACGAAACTAATATTAAATTATGTAGTTCGAGGTTCAGAAAGATTACGAGATTAGATTCCGAACTTTTTGATA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

208

Start:

2222930  

End:

2223137

Strand:

+

>B1_SINE-tRNA_15

GGACACATTAATCTGGTGGTGAACGGCTTGCAACTGCAAGTACGGCCCTGGGTTCGACTCGCACTGGCCACCGGAAAATTCACATGCGGAACCCCAGCGTCCGAAACCAAAAACTGTTCACGGTGAATCACCGTGACGTCCTGGCAGCGTCTTTATTCGCTTCGGTTTCTAGTCTAGACCATCTCGGTGGGGCCAGACACTCGGTTAT

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

208

Start:

2288898  

End:

2289105

Strand:

-

>B1_SINE-tRNA_16

ACTGCCACCCAAATTAAATGTCTTCCGACTAATGTTACAAGATAGCATAATCGTCTCTATAACTGAACTACTGTATAAATTTATCTAGACCAAAAATTCAATCCATACTGGTCAAGTATCAACAACTTTGTTTCTAGATAGAATCAAATTTATAACAGATAAATTTACACCGTATCCCAAATTAACTTTTACCGCTTAGATACCATCA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

181

Start:

2589549  

End:

2589729

Strand:

-

>B1_SINE-tRNA_17

GAATTATACAGAGGTATTCTGGCCCCACAGAAATGGTCCAGACTAGTCACGTGTTACCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCCCCAGTGGCCGGGATTCGAACTCAGGTGGCGGAAGTCACAGCTGTGAGCTCTTTACCACTAAAGCTAGAAGTCCCGGTTA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

108

Start:

2825384  

End:

2825491

Strand:

+

>B1_SINE-tRNA_18

TTAGGAATGGATGTCGTAGGACGATTTAGCAATGCAGTCAAAGGTGAATCATTCCGAAATAAATATTATTGTCGGCTGTAATATCGTCTATAATTAATCACTGTAATA

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

160

Start:

3388536  

End:

3388695

Strand:

-

>B1_SINE-tRNA_19

CCGGCGGCCGTGGTCAACCGACTAATCCCCCTGAATCTGGAACCAGCCTGCGTCTATACCTTCCAGGGAGCCTAAGTCATTCCGTGGCCAGCATGCATTAAACCCGGGTCCGTATTGGGGCTTTTTGCTCCCTCAAGACCACTAGGCCAACTTGCGCTGG

Brassica nigra (Ni100_V1.0)

ID:

B1_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

185

Start:

3553768  

End:

3553952

Strand:

+

>B1_SINE-tRNA_20

GTGGAAACCGAGTTAGTCCAGTAGTTTGACTAAGGATTCATTAATCTTTTTATATCAGGAAGTATGAATTTCAATTACCGGAGAAAACTAAATTATATGAATTAAAGAAAAAAAAAACTTATAAGAAATTTGCAGCATAACGCAAGAGTACTATAAAACGTGGATTCTATAGGGCGGTTCCAGTG