TBGR-Browse-Bna-SINE.SINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffold0025_SINE_1	Retrotransposons	SINE	SINE	83	3654891	3654973	+
scaffold0257_SINE_2	Retrotransposons	SINE	SINE	83	5993	6075	+
scaffold0320_SINE_3	Retrotransposons	SINE	SINE	83	6791	6873	+
scaffold0470_SINE_4	Retrotransposons	SINE	SINE	83	15958	16040	+
scaffold0665_SINE_5	Retrotransposons	SINE	SINE	159	8567	8725	+
scaffoldA01_SINE_6	Retrotransposons	SINE	SINE	159	34981933	34982091	-
scaffoldA01_SINE_7	Retrotransposons	SINE	SINE	93	35018057	35018149	+
scaffoldA01_SINE_8	Retrotransposons	SINE	SINE	166	35055631	35055796	+
scaffoldA03_SINE_9	Retrotransposons	SINE	SINE	101	23984712	23984812	+
scaffoldC01_SINE_10	Retrotransposons	SINE	SINE	188	701601	701788	+
scaffoldC01_SINE_11	Retrotransposons	SINE	SINE	166	3426900	3427065	+
scaffoldC01_SINE_12	Retrotransposons	SINE	SINE	123	4316039	4316161	+
scaffoldC01_SINE_13	Retrotransposons	SINE	SINE	149	4755667	4755815	+
scaffoldC01_SINE_14	Retrotransposons	SINE	SINE	161	8420269	8420429	+
scaffoldC01_SINE_15	Retrotransposons	SINE	SINE	159	9078269	9078427	+
scaffoldC01_SINE_16	Retrotransposons	SINE	SINE	83	12325325	12325407	-
scaffoldC01_SINE_17	Retrotransposons	SINE	SINE	160	12563884	12564043	-
scaffoldC01_SINE_18	Retrotransposons	SINE	SINE	101	36222110	36222210	-
scaffoldC01_SINE_19	Retrotransposons	SINE	SINE	100	40535275	40535374	+
scaffoldC02_SINE_20	Retrotransposons	SINE	SINE	159	5875477	5875635	+

Brassica napus (ZS11_V2.0)

ID:

scaffold0025_SINE_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

3654891

End:

3654973

Strand:

+

>scaffold0025_SINE_1

AGGTCCCGTAAGAAGGTACAGACGCCGGCTGGCTCCGGGCCTAGGTGGTGGGCTGGCCGAAGGCCGGTCAACACCTGGTTAAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0257_SINE_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

5993

End:

6075

Strand:

+

>scaffold0257_SINE_2

AGGTCCCGTAAGAAGGTACAGACGCCGGCTGGCTCCGGGCCTAGGTGGTGGGCTGGCCGAAGGCCGGTCAACACCTGGTTAAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0320_SINE_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

6791

End:

6873

Strand:

+

>scaffold0320_SINE_3

AGGTCCCGTAAGAAGGTACAGACGCCGGCTGGCTCCGGGCCTAGGTGGTGGGCTGGCCGAAGGCCGGTCAACACCTGGTTAAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0470_SINE_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

15958

End:

16040

Strand:

+

>scaffold0470_SINE_4

AGGTCCCGTAAGAAGGTACAGACGCCGGCTGGCTCCGGGCCTAGGTGGTGGGCTGGCCGAAGGCCGGTCAACACCTGGTTAAT

Brassica napus (ZS11_V2.0)

ID:

scaffold0665_SINE_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

8567

End:

8725

Strand:

+

>scaffold0665_SINE_5

ACCCAGGACCTCGTAGTCCAGTGGTACTACCTCCGGGAGTGGAGGTCGGCTGTTCGACTCGCGGGGAGGGGGAGGCGTGCCCAGGGCCCGTAAAAAGGTACAGGCAAAGGCTAGCGCCGGGCCTAGGTGGGGGGCCGCAAGGTCAACACCTGGTTAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldA01_SINE_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

34981933

End:

34982091

Strand:

-

>scaffoldA01_SINE_6

ATTAACCAGGTGTTGACCTTGCGGCCCACCACCTAGGCCCGGCGCCAGCCTTTGTCTGTACCTTCTTACGGGCCCTGGACACGCCTCCTCCTCTCCGCGAGTCGAACCGGTCACCTCCCCTCCCCAAGAAGGATACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldA01_SINE_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

93

Start:

35018057

End:

35018149

Strand:

+

>scaffoldA01_SINE_7

GGGAGGAGTGTCCAGGGCCTTAACCGGTACAGATGCAGGCTGGCTCCGGGCCTAGGGGGGAGTAAGGCCGAAGGCCCGAACCCTCCTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldA01_SINE_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

166

Start:

35055631

End:

35055796

Strand:

+

>scaffoldA01_SINE_8

TTACACCCGGATTCGATAGTCCAGTGGTACCTGCCCCTCAACTTTGGGAGGTCAGCTGTTCGATTCGCAGGCGGGGAGGCGTGCCCAGGGCCCTAATCGGTACAGGCGCAGGCTGGCGCCGGGCCTAGGTGGTGGGCTGGCCGAAGGCTGGTCAACACCTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldA03_SINE_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

23984712

End:

23984812

Strand:

+

>scaffoldA03_SINE_9

GGGAGGAGTGTCCAGGGCCTTAACCAGGTACAGACACAGGCTGGCTCCGGGCCTAGGGGAGGAGAGTAGGGCCTAAGGCCCGAACCCATCCCCTGGTTAAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

188

Start:

701601

End:

701788

Strand:

+

>scaffoldC01_SINE_10

TCACCCGGACTTGATAGTCCAGTGGTACTTGGACTTCCGCCTTGAGCTCGGCTGGAGGTCGGGGGTTCGAGCTAGGCTGGAGGACTCTTAAGCGGGGAGGCGTGTCCAGAGCTCTAACCGGTACAGGCGCAGGCTGGCGTCGGGTCTAGGTGGTGGACTGGCCGAAGGCTGGTCTAACACCTGATTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

166

Start:

3426900

End:

3427065

Strand:

+

>scaffoldC01_SINE_11

ACCCAGGATCTCGTAGTCCAGACTACCTACTCTTTGGGGAGGAGAGGTCGGCTGTTCGACTCGCGGAGAGGGGGAGGCGTGCCCAGGACCCTAACCGGTACAGGCACAGGCTGGCGCCGGATCTAGGTGTTGGGCTGGTCGAAGGCTGGTCAACACCTGGTTAAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

123

Start:

4316039

End:

4316161

Strand:

+

>scaffoldC01_SINE_12

GAGAAGTCACGAGTTCGAGTCTCGGGCAGGGAGGAATGTCCAGGACTGTAATGGTACAGACACAGGCTGGCTCCGGACCTAGGAGGGGATTAGGGCCGAAGGTCCGAACCCCGCATGGTTAAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

149

Start:

4755667

End:

4755815

Strand:

+

>scaffoldC01_SINE_13

GGACCTTGTAGTCCAGTGGTACTACCTCCTTGTGGAAGGGAGGTCGGCTGTTCGACTCGCGTAAAGGGGGAGGCGTGTCCAGGGCCCATAAAAAAGGGCAGGCTGGCGCCTAACCTAGATGGTGGGCCGCAAGTTAAACACGTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

161

Start:

8420269

End:

8420429

Strand:

+

>scaffoldC01_SINE_14

TCACCCGGACTCGATAGTCCAGTGGTATCTCCCCCTTGGGGAGGTCAGCTGTTCGACTCGCAGGGCGGGGAGGCGTGCCCAGGGCCCTAACCGATACAGGCAAAGGCTGGCGCCGGGCCTAGGTGTGGGCTGACCGAAGGTTGGCCAACAACCTGGTTAAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

9078269

End:

9078427

Strand:

+

>scaffoldC01_SINE_15

ACCCAGAACCTCGTAGTCTAGTGGTATCATCCTCCTTGGGGAGGGGAGGTGGCCGGTTCGACTCGCGGGGAGGGGGAGGCGTGTCCAGGGCCCGTAAGAAGGTACAGACAAAGGCTGGCGCCGGGCCTAGGTGGTGGGCCGCAAGGTCAACACCTGTTT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

12325325

End:

12325407

Strand:

-

>scaffoldC01_SINE_16

ATTAACCAGGTGTTGACCGGCCTTCGGCCAGCCCACCACCTAGGCCCGGAGCCAGCCGGCGTCTGTACCTTCTTACGGGACCT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

160

Start:

12563884

End:

12564043

Strand:

-

>scaffoldC01_SINE_17

TTAACCAGGTGTTGGCTTTGCAGTCCACCAGCTAGGCACGGCGCCAGCCTTTGTCTGTACCTTTTTACGGGTCCTGGACACGCCTCTCCTTCCACGCGAGTCGAACAGCCGACCTCCCCTCTCCAAGGAGGTAGTACCACTGGACTATGAAGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

36222110

End:

36222210

Strand:

-

>scaffoldC01_SINE_18

GTTTAACCAGGTGGTGGGTTCGGGCCTTCGGCCCTATTCCCTCTCCCTAGGCCCGGAGCCAGCCTGCGTCTGTACCGATTAAGGCCCTGGACACTCCTCCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC01_SINE_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

100

Start:

40535275

End:

40535374

Strand:

+

>scaffoldC01_SINE_19

GAAGGAGTGTCCAGGGCCTTAACCGGTACAGACGCAGGCTGGCTCCGGGCCTAGGGGGAGGGAGTAGGACCGAAGGCCCGAACCCACCACCTGGTTAAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC02_SINE_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

5875477

End:

5875635

Strand:

+

>scaffoldC02_SINE_20

ACCCGGACTCGATAGTCCAGTGGTACCTGCCCCTTTGGGAGGTCAGCTGTTCGATTCGCAGGGCGGGGAGGCATGCCCAGGGCCCTAACCGGTACAGGCGCAGGCTGGCGCCGGGCCTAGGTGGTGGACTGGCCGAAGGCTGGTCAACACCTGGTTAAA