ID Class Order Superfamily Length Start End Strand View
A01_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA8810285821028669-
A01_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA9411999281200021+
A01_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA18626294572629642+
A01_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA9027908082790897-
A01_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA16438858793886042-
A01_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA8940512214051309-
A01_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA16144062934406453+
A01_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA19347112424711434-
A01_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA9258733835873474-
A01_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA12360152266015348+
A01_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA15861559576156114+
A01_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA15764350356435191+
A01_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA8368635566863638+
A01_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA9874617097461806-
A01_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA8778238867823972-
A01_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA15978247077824865+
A01_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA8378281257828207-
A01_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA8378435907843672+
A01_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA901035521210355301-
A01_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA1011039187610391976+

< 1 2 3 4 5 > Total 137


Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

88

Start:

1028582  

End:

1028669

Strand:

-

>A01_SINE-tRNA_1

TTTTTTTTTAATACCAGGAGGTTCGGGGCCTAATTCCAAGCCCGTAATTGCCCAAGCCCGAAACCGCAGCATGTAATATTAGTTTCAT

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

94

Start:

1199928  

End:

1200021

Strand:

+

>A01_SINE-tRNA_2

TGGAACAAGACTAATATTACATATCAGGATTTCGGCTCGAGAAGATTAAGTGATTCGGACCAGAACCTGATATTCAAAAAAAAAAAAAAATAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

186

Start:

2629457  

End:

2629642

Strand:

+

>A01_SINE-tRNA_3

AACCAAGTGGTTTTGGCATAGTGGTAAAGGGGCTCCAACTGGAGCTCCGCTATGGGTTCGATTCCTCTTGGCCATCCATGGACGTCTTAAGTGGCAAGAAAACCCGAATTTCTATGGGCTTCGTAGTGATTAGTCATTGGGCCTAGAAAGCCTTTAAGATCACACTACGGTTATCAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

90

Start:

2790808  

End:

2790897

Strand:

-

>A01_SINE-tRNA_4

CATGTTAAATCCACTGTGGTCGGGGCTCGAACTCGTGATGGAGGGCACCTCAGCCGAGGTTCCTTTACCACCAGACCACGAGGCCCGGTT

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

3885879  

End:

3886042

Strand:

-

>A01_SINE-tRNA_5

TTTTTTTTTTTGAATTCAAAAAGTTCTAGGCCTAAGTCCAGAATCTCTTTAAGCCAGGGACAAGAGCCGGTTGTTTAATCCCCTCCCCCTCCCGGCTGCTGCTGAGGCTAGAACCTGGCACCTCTACCCTTTGGGAAGAAGGCTTTACCATTTGAGCTAGCAAC

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

4051221  

End:

4051309

Strand:

-

>A01_SINE-tRNA_6

CATGGTAAATCCGATGTGGCAGAGCTCGAATTCGTGATAGCGGACACCTCAGCCGAGGTTCCTTTACCACCAGACCACGAGGCTCGGTT

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

4406293  

End:

4406453

Strand:

+

>A01_SINE-tRNA_7

AAATGTAATTAGTTCAACTTGAAAGGATCTCTGCCATTGTGTAAGAGGTTTCTATTTCGAATAACCGCTGGGATAATTAATATTACATGTTGTGGTTTCGGACCTAAAAAGATTATGAGCTTCCGTTCCGAATCTTCTACTATTCAAAAAAAGGTAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

193

Start:

4711242  

End:

4711434

Strand:

-

>A01_SINE-tRNA_8

TTTTTTTTTTTTTGAATTATACAGAGGTATCCAGGCTCCACATAAGTGGTCTAGACTAATCACGTGTTGCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCTCCAGTGGCTGGAATTCGAACCCAGGTGGCGGTACTCACAGTTGTAAGCCTTTTACCACTAGAGCTAGAAGTCCCGGTT

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

92

Start:

5873383  

End:

5873474

Strand:

-

>A01_SINE-tRNA_9

AATCTGCAATAAATTGCATAGTCTGGGATTCGAACCCCAGACCTAGGTGTAGAAGCCTTTAAACCTTAACCAATAGGCTACGGTGCTTCCAC

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

123

Start:

6015226  

End:

6015348

Strand:

+

>A01_SINE-tRNA_10

AACCAAGCGCTCGTAGCTTGGTGGTAAAGGAGGTATAGCTGTACTGCCTGCCACCCGGGTTCGAGTCTTGGCCACAACGGATTTAACATCCCTTCCGTTGGGGCGCTGGACCCCTTTCGGGGG

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

6155957  

End:

6156114

Strand:

+

>A01_SINE-tRNA_11

TAAAGAGGTTCCAGCTGGAGTTTCCGCCATAGGTTCGATTCTTCTCGACCATCCATAGATGTTTTAAATGGCAAAAAAATCCGGATTTTATGGGCTTTTTGGTGATTATTCTTTGGGCCTAGAAAACCTTTGGAGTATACCAGATTATCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

157

Start:

6435035  

End:

6435191

Strand:

+

>A01_SINE-tRNA_12

ACCATAGGTCATTAACTCAACTGGAAAGGGATCTGATCATTGTGTCGGAGGTCTCCAGTTCGAGTGACCACTGAAACAAAACTAATAATACATTGGTTTCGGGCCTGGGGGTTTACGGCTTCGGCCCGAACCTCTTGGTATTAAAAAAGAAAAAAGA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

83

Start:

6863556  

End:

6863638

Strand:

+

>A01_SINE-tRNA_13

TTTTGGTTTAGTGGTATAGGAATTCCAGCTGGAGTGCCCGTCCCTGGGTTCGAGTCTTAGCTACTGCAGAATTTACATATGGG

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

98

Start:

7461709  

End:

7461806

Strand:

-

>A01_SINE-tRNA_14

TTTTATTTTGAATATTAGGAGGTTCGGGCCGAAACCCGTAAACCCCCAAATAAAAACCACAACATGTAATATTAGTTTCTTTCCAGCTTTCACTCGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

87

Start:

7823886  

End:

7823972

Strand:

-

>A01_SINE-tRNA_15

TTTTTTTTTTGAATACCAAGAGATTTGGGCCGAAGTAATCCTCCAAAACCCGAAACCACATCATGTAATATTAGTTTCATCTCAGCG

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

7824707  

End:

7824865

Strand:

+

>A01_SINE-tRNA_16

ACCAGAGGTCTTTGTCTCAACTGGAAAAAACCCTGCCCATTGTGTTAAAGATCCCCAGTTCGAATAACCGATAAGACAAACTAATATTAAATGCTATGGTTTCATGCCTGGGGAGATTACGGGCTTTGGCCCCAAACCTCCCTGTATTCAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

83

Start:

7828125  

End:

7828207

Strand:

-

>A01_SINE-tRNA_17

TGTAATATTAGTTTCGTTCCAGCTGTCCCTCGGACTGGGGACCTCTGACACAATGGCCAGGGTCCTTTTGATATAATGACATT

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

83

Start:

7843590  

End:

7843672

Strand:

+

>A01_SINE-tRNA_18

AATGTCATTATATCAAAAGGACCCTGGCCATTGTGTCAGAGGTCCCCAGTCCGAGGGACAGCTGGAACGAAACTAATATTACA

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

90

Start:

10355212  

End:

10355301

Strand:

-

>A01_SINE-tRNA_19

AATCTGCAATAAATTGCATAGTCTGGAATTTGAACCCCAGACCTGAGTGTAGAATTTTAAACCTTAACTAATAGGCTACGGTGTTTCCAC

Brassica juncea (Tumida_V1.5)

ID:

A01_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

101

Start:

10391876  

End:

10391976

Strand:

+

>A01_SINE-tRNA_20

TCGTACTTTGGTGGTAAAGGAGGTACAGCTGTACTGCCCGCACCCGGGTTCGAGTCTTGGCCACAACGGATTTAACATCCCTTCCGTTGGGGCGCTGGACC