TBGR-Browse-Bju-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_Retroposon-L1-dep_1	Other	Retroposon	Retroposon-L1-dep	202	15219714	15219915	-
A02_Retroposon-L1-dep_2	Other	Retroposon	Retroposon-L1-dep	213	10581802	10582014	-
A02_Retroposon-L1-dep_3	Other	Retroposon	Retroposon-L1-dep	213	10582680	10582892	-
A02_Retroposon-L1-dep_4	Other	Retroposon	Retroposon-L1-dep	261	25101716	25101976	+
A03_Retroposon-L1-dep_5	Other	Retroposon	Retroposon-L1-dep	267	9689351	9689617	+
A03_Retroposon-L1-dep_6	Other	Retroposon	Retroposon-L1-dep	267	9712096	9712362	+
A03_Retroposon-L1-dep_7	Other	Retroposon	Retroposon-L1-dep	268	12505515	12505782	-
A03_Retroposon-L1-dep_8	Other	Retroposon	Retroposon-L1-dep	435	30361492	30361926	-
A03_Retroposon-L1-dep_9	Other	Retroposon	Retroposon-L1-dep	435	30384381	30384815	-
A05_Retroposon-L1-dep_10	Other	Retroposon	Retroposon-L1-dep	423	3326672	3327094	-
A05_Retroposon-L1-dep_11	Other	Retroposon	Retroposon-L1-dep	427	6498704	6499130	-
A05_Retroposon-L1-dep_12	Other	Retroposon	Retroposon-L1-dep	248	12170003	12170250	-
A06_Retroposon-L1-dep_13	Other	Retroposon	Retroposon-L1-dep	227	2874830	2875056	+
A06_Retroposon-L1-dep_14	Other	Retroposon	Retroposon-L1-dep	259	18073418	18073676	+
A06_Retroposon-L1-dep_15	Other	Retroposon	Retroposon-L1-dep	346	27820277	27820622	-
A07_Retroposon-L1-dep_16	Other	Retroposon	Retroposon-L1-dep	435	1811782	1812216	-
A07_Retroposon-L1-dep_17	Other	Retroposon	Retroposon-L1-dep	211	14263916	14264126	-
A07_Retroposon-L1-dep_18	Other	Retroposon	Retroposon-L1-dep	211	14278576	14278786	-
A07_Retroposon-L1-dep_19	Other	Retroposon	Retroposon-L1-dep	173	15292090	15292262	+
A07_Retroposon-L1-dep_20	Other	Retroposon	Retroposon-L1-dep	189	16483577	16483765	-

Brassica juncea (Tumida_V1.5)

ID:

A01_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

202

Start:

15219714

End:

15219915

Strand:

-

>A01_Retroposon-L1-dep_1

GGAAACCAGACAAAGAGGGGCCTCCTGTCTTACACGCAAACAGATCGATCTAACCAAAGCCACCTACAGACTCAGGACAAGACACCTCTTCGCAAGAGAAAACAAGAAGGCCAAGACCACTTCGACGCCTTGAAATCTCCCAAAGCCACAAAGACAAAAGAAACAAGAAAGTAGATGCCGTCACATCAATCTTCGATCCGAA

Brassica juncea (Tumida_V1.5)

ID:

A02_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

213

Start:

10581802

End:

10582014

Strand:

-

>A02_Retroposon-L1-dep_2

GAGAAAACGCCAAAGAAGACCACCAGTTCTTACACGTGCACTCGCAAGACAGCCAAGTGATCTGACTGTCCATCTCTTCGCAAGAGAAGAACTGAAGAACAAGTAAACTGCTTCGTCTAGAAACCATACCCATATCCTGAGAGTACCAATGAAATATCTAGTAGATATCTCCACAACGAACACACATCACAAAAGCGAGAACCCAAATAACGA

Brassica juncea (Tumida_V1.5)

ID:

A02_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

213

Start:

10582680

End:

10582892

Strand:

-

>A02_Retroposon-L1-dep_3

GAGAAAACGCCAAAGAAGACCACCAGTTCTTACACGTGCACTCGCAAGACAGCCAAGTGATCTGACTGTCCATCTCTTCGCAAGAGAAGAACTGAAGAACAAGTAAACTGCTTCGTCTAGAAACCATACCCATATCCTGAGAGTACCAATGAAATATCTAGTAGATATCTCCACAACGAACACACATCACAAAAGCGAGAACCCAAATAACGA

Brassica juncea (Tumida_V1.5)

ID:

A02_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

261

Start:

25101716

End:

25101976

Strand:

+

>A02_Retroposon-L1-dep_4

TTTTTGGATTCGTCGGTGTGAAGTATATCTGCTGTGGAGGTATCTACTAGACCTCTCCTTTATCCACCATAGATTGGGCCAACGTTTCGAAACGAAGTAGTGAGTTTGATTTGCAGGTTTTCTCTTGTGAGGAGGTGACCAGTTTTAGCTATGTAGATCGCTATTCTGCCTAACGAGTGTCTGCGTGTAAGACCTGTAAATCTTTGCCGGTGTTTTTTCCTTTAGCATTTCAAGTTCTTGTGTCCTTGAGCCTAATTGTTT

Brassica juncea (Tumida_V1.5)

ID:

A03_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

267

Start:

9689351

End:

9689617

Strand:

+

>A03_Retroposon-L1-dep_5

TTGTGAGGAGATCTTGTAGCTTTTTGGATTCGTCGGTGTGAGGTGTATTTCCTGTGGAGATATCTACTAGACCTCTCCTTTATCAATCGTAAATTGGGCAAGCGTTTCGAGACGAAGCCGTGAGTTTGATTTGCAGGTTTTCTCTTGCGAGGAGGTGACCAGTTTTAACTCTGTAGATCGCTATTTTGGCTAACGAGTGTCCGCGTGTAAGACCTGTAAATCTTCGCCGGTGTTTTTCCCTTTAGCATTTCAAGTTCTTGTGTCCTT

Brassica juncea (Tumida_V1.5)

ID:

A03_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

267

Start:

9712096

End:

9712362

Strand:

+

>A03_Retroposon-L1-dep_6

TTGTGAGGAGATCTTGTAGCTTTTTGGATTCGTCGGTGTGAGGTGTATTTCCTGTGGAGATATCTACTAGACCTCTCCTTTATCAATCGTAAATTGGGCAAGCGTTTCGAGACGAAGCCGTGAGTTTGATTTGCAGGTTTTCTCTTGCGAGGAGGTGACCAGTTTTAACTCTGTAGATCGCTATTTTGGCTAACGAGTGTCCGCGTGTAAGACCTGTAAATCTTCGCCGGTGTTTTTCCCTTTAGCATTTCAAGTTCTTGTGTCCTT

Brassica juncea (Tumida_V1.5)

ID:

A03_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

268

Start:

12505515

End:

12505782

Strand:

-

>A03_Retroposon-L1-dep_7

AAAGATTTGAGAAGACCACAATCCATCACAGATAACAACCACAACCTCACGAGAAACAATAAAAAACCGAGGCGCAAACAGAGCCAATAACCACTACCACGTCTGCAATAAGACCACGGACAACCCAAGAGAGGAAAGGCACAAGGTTGAACCTTGAAACTCCAAGCGGGGAAAACGTATAAAAGGATCAGAAGCTCTTGCACGCTGACCCTCGTGTACCCAAACTCAACCATCTACAAAGCAAGAGAGTGGTCACGTCCTTGCAAGA

Brassica juncea (Tumida_V1.5)

ID:

A03_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

435

Start:

30361492

End:

30361926

Strand:

-

>A03_Retroposon-L1-dep_8

CGAAACCACACTCTCACAGGAACCAACCCGGCAGAAACTACAACGCCAAAACTGAAGCAGACACAGAGACAAAAGCCACTAATAGCACATCTGCAACAAACCGCCAGCGACCATGAAAAACCAAAGCACAAGATCAAAACTTGAAACTCGAAGAGGGGACAACAACTAAAAAGATCAGCAGCTCATACACGCGGACCCTCGTGTACCCATACCCCACCACCTACAAGCAAAAGTATGGTCACCTCCTCGCAAGAGATGAGCTGAAAACCGAAACCACTGCTTCGTCTTAATGCTTTACTCCGCAAACCAGTCACAGAGAAAAAACAGGTAGATGGCTCCACAGCTGTATACCATCCAAAAGTCGAACCCCAACCACAAGACCTCGACAAACTGGAAGCGCCAAAAGCTCGAAGAGATAAGAAGAAGCGGAAGTAG

Brassica juncea (Tumida_V1.5)

ID:

A03_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

435

Start:

30384381

End:

30384815

Strand:

-

>A03_Retroposon-L1-dep_9

CGAAACCACACTCTCACAGGAACCAACCCGGCAGAAACTACAACGCCAAAACTGAAGCAGACACAGAGACAAAAGCCACTAATAGCACATCTGCAACAAACCGCCAGCGACCATGAAAAACCAAAGCACAAGATCAAAACTTGAAACTCGAAGAGGGGACAACAACTAAAAAGATCAGCAGCTCATACACGCGGACCCTCGTGTACCCATACCCCACCACCTACAAGCAAAAGTATGGTCACCTCCTCGCAAGAGATGAGCTGAAAACCGAAACCACTGCTTCGTCTTAATGCTTTACTCCGCAAACCAGTCACAGAGAAAAAACAGGTAGATGGCTCCACAGCTGTATACCATCCAAAAGTCGAACCCCAACCACAAGACCTCGACAAACTGGAAGCGCCAAAAGCTCGAAGAGATAAGAAGAAGCGGAAGTAG

Brassica juncea (Tumida_V1.5)

ID:

A05_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

423

Start:

3326672

End:

3327094

Strand:

-

>A05_Retroposon-L1-dep_10

AGAGACTTGAGAAGACCACAATCCATCAAGGTCACAACCACAACCTCACGAGAAACAACACCGGCGGAAACAATCAAAAACCGAGGCGCAAAAGGAGCCAATAACAACCACTACCGCGTCTGCACTAAGACCACGAACAACCTAAGAGAGGAAAGGCACAAGGTCGAACCTTGAAACTCCAAGCGGGGAAAACGTCTAAAAGGATCAGCAGCTCTTGCACGCGGACCCTCGTGTACCCAAACTCAACCATCTACAAAGCAAGAGAGTGGTCACTTCCTCGCAAGAGAAGAGCCGAAGATCGAACCCATTGCTTCGTCTTGATACCTCACACCATAGAGAAGAAGCAAGTAGATGCCTACACAACAGATTACCATCCAAGAGACGAACCCAACAAAAGAGACCCTGACAAACGCAGATTACCAA

Brassica juncea (Tumida_V1.5)

ID:

A05_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

427

Start:

6498704

End:

6499130

Strand:

-

>A05_Retroposon-L1-dep_11

AGAGACTTGAGAAGACCACAATCCATCACAGGTCACAACCACAGCCTCACGAGAAACAACACCGGCGGAAACAATCAACAACCGAGGCGCAAATGGAGCCAATAACAACCACTACCGCGTCTGCAATAAGACCACGGACAACCCAAGAGAGGAAAGGCACAAGGTTGAACCTTGAAACTCCAAGTGGGGAAAACGTCTAAAAGGATCAGCAGCTCTTGCACGCGGACCCTCGTGTACCCAAACTCAACCATCTACAAAGCAAGAGAGTGGTCACGTCCTCGCAAGAGAAGAGCCGAAGATCGAACCCATTGCTTCGTCTTGATACCTCACACCATGCAGAGGAAGCAAGTAGATGCCTACACAACAGATTGCCATCCAAGAGACGAACCCAACAAAAAGACCTTGACAAACACAGATTACCAACGAC

Brassica juncea (Tumida_V1.5)

ID:

A05_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

248

Start:

12170003

End:

12170250

Strand:

-

>A05_Retroposon-L1-dep_12

AAGACACAAGAACTTGAAATGCTAAAGGGAAAAACACCGGTGAAGATTTACAGGTCTTACACGCGGACATTCGTTAGGCAGAATAGCGATCTACAGAGCTAAAACTGGTCACCTCCTCGCAAGAGAAGACCTACAAATCAAACTCATTGCTTCGTCTCGAAACGCTCGTCCAATCCATGGTAGATAAAGGAGAGGTCTAGTAGATTCCTCCACAGCAAATATACCTCACACCGACGAATCCAAAAAGC

Brassica juncea (Tumida_V1.5)

ID:

A06_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

227

Start:

2874830

End:

2875056

Strand:

+

>A06_Retroposon-L1-dep_13

CCCGTGTGGAGGTATCTACTAGACCTCTCCTTTTATACACCATGGATTGGGTGAATGTTTCAAGACGAAGATATGGGTTTGGTTTGCAGGTCTTCTCTTGCAAGGAGGTGACTAGTTTTAGCTTTGTAGATTGCTATTATGCCTAATGAGTGTCCATTTGTAAGATTTTTAAATCTTCACCGATGTTTTTCTCTTTAGCGTTTCAAGTTCGTGGATCCTTGAACCTT

Brassica juncea (Tumida_V1.5)

ID:

A06_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

259

Start:

18073418

End:

18073676

Strand:

+

>A06_Retroposon-L1-dep_14

TCATTATTTGGGTTCGTCTTTGTGATTTGTGTTCGCTGTAGAGGTATCTACTAGATCTTTCCTTGGTCCTCTGTGGATAGGGGATTTAGTTTCTAGACGAAGCAGTTGACTTGTTCTTCAGTTCTTCTCTTGCGAGGAGGTGGGCAGTCTTTGTTTTGTATATCACCTGGCTGTCTTGCGAGTGTCTGCGTGTAAGAGCTGGTGGTCTTCTTTGACGTTTTCTCAAGTGGCATTTCAAGTTCTTTGGTTCTTGTACCTT

Brassica juncea (Tumida_V1.5)

ID:

A06_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

346

Start:

27820277

End:

27820622

Strand:

-

>A06_Retroposon-L1-dep_15

GAAGGGTACACCACCAAGCCAAAACAGGCGCAACATCGGTAAAAGCATGTGCGAGGATAAACTTAAATCAACACCAGAGACCGTTGCAAAACGGAGGCAAGGCAGAACCAAAATCAAAACCAAACACCTAAAAGACAAAGAATCTTTGAAATGCTAAAGGGAAAAACACCGGCGAAGATTTACAGGTCTTACATGCGGACATTCGCTTGGCAGAATAGCGATCTACGGAGCTAAACTGGTCACCCTCCTCGCAAGAGAAAACCTGCAAATTAAATCCACTGCTTCGTCTCGAAACACTCACCCAATCCCTGGTGGGTAAAGGAGAGGTAAGTAGATACCTCCACAG

Brassica juncea (Tumida_V1.5)

ID:

A07_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

435

Start:

1811782

End:

1812216

Strand:

-

>A07_Retroposon-L1-dep_16

CGAAACCACACTCTCACAGGAACCAACCCGGCAGAAACTACAACGCCAAAACTGAAGCAGACACAGAGACAAAAGCCACTAATAGCACATCTGCAACAAACCGCCAGCGACCATGAAAAACCAAAGCACAAGATCAAAACTTGAAACTCGAAGAGGGGACAACAACTAAAAAGATCAGCAGCTCATACACGCGGACCCTCGTGTACCCATACCCCACCACCTACAAGCAAAAGTATGGTCACCTCCTCGCAAGAGATGAGCTGAAAACCGAAACCACTGCTTCGTCTTAATGCTTTACTCCGCAAACCAGTCACAGAGAAAAAACAGGTAGATGGCTCCACAGCTGTATACCATCCAAAAGTCGAACCCCAACCACAAGACCTCGACAAACTGGAAGCGCCAAAAGCTCGAAGAGATAAGAAGAAGCGGAAGTAG

Brassica juncea (Tumida_V1.5)

ID:

A07_Retroposon-L1-dep_17

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

211

Start:

14263916

End:

14264126

Strand:

-

>A07_Retroposon-L1-dep_17

AAGACCACACCAGCTCTTACACGCGGACACTCGCAAGACGGCCAAATGACCTACAGAACAAAGACGGTCCACCTCCTCGCAAGAGAAGAACTGAAAAACAAGTCAACTACTTCGTCTAAAAACCATATCCCATATCCACAGAGGACCAAGAAAAGATCTAGTAGATACCTCCACATCAAACACAAATCACAAAGACGAATCCAAATAACGA

Brassica juncea (Tumida_V1.5)

ID:

A07_Retroposon-L1-dep_18

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

211

Start:

14278576

End:

14278786

Strand:

-

>A07_Retroposon-L1-dep_18

AAGACCACACCAGCTCTTACACGCGGACACTCGCAAGACGGCCAAATGACCTACAGAACAAAGACGGTCCACCTCCTCGCAAGAGAAGAACTGAAAAACAAGTCAACTACTTCGTCTAAAAACCATATCCCATATCCACAGAGGACCAAGAAAAGATCTAGTAGATACCTCCACATCAAACACAAATCACAAAGACGAATCCAAATAACGA

Brassica juncea (Tumida_V1.5)

ID:

A07_Retroposon-L1-dep_19

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

173

Start:

15292090

End:

15292262

Strand:

+

>A07_Retroposon-L1-dep_19

TGAGTTTGGCAAGGTTTCGTTCTGGGTTTTGTTTTTCAGACGTGTTATTGCTGCGATGCATCTACTAGCTCTTTTCTACGACTATTGGTCTTGGTTCGGGTTCTTGGCATGGCAGTGATATTGATCTTCAGGTCTTCTCTTGCGAGGAGGTACCCGGTCTTTAGTCTGTAGAT

Brassica juncea (Tumida_V1.5)

ID:

A07_Retroposon-L1-dep_20

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

189

Start:

16483577

End:

16483765

Strand:

-

>A07_Retroposon-L1-dep_20

AAAACGTCAAAGAAGACCACTAGCTCTTCCACGCGGACACTGACAAGACAATCAAATGACCTACAAACAAAGACTGCCCACCTCCTCGCAAGAGAAGAACTGAAGAACAAGTCAACTGCTTCATCTAGAAACCATATCCCATATCCACAGAGGACCAAGGAAAGATCTAGTAGATCCTTCACAACAAAC