TBGR-Browse-Bju-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_snRNA_1	Retrotransposons	Ret_other	snRNA	102	1042370	1042471	-
A01_snRNA_2	Retrotransposons	Ret_other	snRNA	154	8333634	8333787	+
A01_snRNA_3	Retrotransposons	Ret_other	snRNA	102	10983638	10983739	+
A01_snRNA_4	Retrotransposons	Ret_other	snRNA	102	23709828	23709929	-
A01_snRNA_5	Retrotransposons	Ret_other	snRNA	167	33703655	33703821	-
A01_snRNA_6	Retrotransposons	Ret_other	snRNA	102	35135586	35135687	-
A02_snRNA_7	Retrotransposons	Ret_other	snRNA	99	1859640	1859738	+
A02_snRNA_8	Retrotransposons	Ret_other	snRNA	82	2416488	2416569	-
A02_snRNA_9	Retrotransposons	Ret_other	snRNA	110	6419476	6419585	+
A02_snRNA_10	Retrotransposons	Ret_other	snRNA	174	7053902	7054075	-
A02_snRNA_11	Retrotransposons	Ret_other	snRNA	83	7060234	7060316	-
A02_snRNA_12	Retrotransposons	Ret_other	snRNA	174	7062498	7062671	-
A02_snRNA_13	Retrotransposons	Ret_other	snRNA	104	29369024	29369127	-
A02_snRNA_14	Retrotransposons	Ret_other	snRNA	166	30488382	30488547	+
A02_snRNA_15	Retrotransposons	Ret_other	snRNA	103	31582541	31582643	+
A02_snRNA_16	Retrotransposons	Ret_other	snRNA	151	33293540	33293690	+
A02_snRNA_17	Retrotransposons	Ret_other	snRNA	151	33372463	33372613	+
A02_snRNA_18	Retrotransposons	Ret_other	snRNA	151	33374339	33374489	+
A02_snRNA_19	Retrotransposons	Ret_other	snRNA	151	33375827	33375977	+
A03_snRNA_20	Retrotransposons	Ret_other	snRNA	167	6472831	6472997	+

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_1

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

102

Start:

1042370

End:

1042471

Strand:

-

>A01_snRNA_1

AAAAATTTAGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_2

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

154

Start:

8333634

End:

8333787

Strand:

+

>A01_snRNA_2

TACTTACCTGGACGGGGTCAACTCATGATCAAGAAGATGAGTGGCCTAAGCTAGTGACCTCCATTGCACATAACGGAGGGGTGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGTTGGGGCCTGCGTTCGCGC

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_3

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

102

Start:

10983638

End:

10983739

Strand:

+

>A01_snRNA_3

TCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_4

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

102

Start:

23709828

End:

23709929

Strand:

-

>A01_snRNA_4

AAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_5

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

167

Start:

33703655

End:

33703821

Strand:

-

>A01_snRNA_5

GTAGTGCAACGCATGGGCGACTCGTGAAAGCCCAGATAGCAAGCTACCTTAATGGGCTTTCTCCCTTAAAAAATAGAGTTAATATCGTGTGGCCCGATGGGCCACATATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAA

Brassica juncea (Tumida_V1.5)

ID:

A01_snRNA_6

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

102

Start:

35135586

End:

35135687

Strand:

-

>A01_snRNA_6

AAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_7

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

99

Start:

1859640

End:

1859738

Strand:

+

>A02_snRNA_7

TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGTCCATCGGACCACACGATATTAACTCTATTTTT

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_8

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

82

Start:

2416488

End:

2416569

Strand:

-

>A02_snRNA_8

AAAATTTAGACAATTTCTCGATTTGTGCATGTTATTCTTGTGCAGGGGCCATGCTAATTTTCTCTATATCATTCCAATTTTA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_9

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

110

Start:

6419476

End:

6419585

Strand:

+

>A02_snRNA_9

TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGCCCATCGGGTCACACGATATTAACTTTATTTTTTGAGTGAGAAG

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_10

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

174

Start:

7053902

End:

7054075

Strand:

-

>A02_snRNA_10

CCTTGCAGTAGTGCAACGCATGGACGACTCGTGAAAGCCCAGATAGCAAACTATCTTAATGGATTTTCTCCCTTAAAAAATAGATTTAATATCGTGTGGCCCGATGGACCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_11

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

83

Start:

7060234

End:

7060316

Strand:

-

>A02_snRNA_11

GATTGATTACTTACAAGATATTAAAATGATAAAAATAAATACTACACAGTCTACACGTGATCTTAGCCAAGAGGCCGAAAGGC

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_12

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

174

Start:

7062498

End:

7062671

Strand:

-

>A02_snRNA_12

CCTTGCAATAGTGCAACGCATGGGCGACTCGTGAAAGCCCAGATAGCAAGCTATCTTAATGGGCCTTCTCCCTTAAAAAATAGAGTTAATATCGTGTGGCCCGATGGACCACATATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_13

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

104

Start:

29369024

End:

29369127

Strand:

-

>A02_snRNA_13

AGAAATTTGAACTATTTCTCGATTTGTGCGTGTCATCTTTGCGCAGGGACCATGCTAATCTTCTATGTATCGTTCCAATTTTATTGGATGTCCCCAAAGGAACA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_14

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

166

Start:

30488382

End:

30488547

Strand:

+

>A02_snRNA_14

TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGACCATCGGTCCACACGATATTAACTCTATTTTTTGAGGGAGAAAGCCCATTAAGATAGCTTGCTATCTGGGCTTTCACGAGTCGCCCATGCGTTGCACTA

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_15

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

103

Start:

31582541

End:

31582643

Strand:

+

>A02_snRNA_15

TTTTCGGCTTTTTAGGTAAGATCAAATGTAGTATATGTTCTTATTAATATAATATTTTATATGTGGATTATCTGTTCATATGATATTAATTTTATTTTTAAAG

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_16

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

151

Start:

33293540

End:

33293690

Strand:

+

>A02_snRNA_16

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGC

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_17

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

151

Start:

33372463

End:

33372613

Strand:

+

>A02_snRNA_17

ACTTACCTGGACGGGGTCGACTCATGATCAGGAAGACGAGTGGCCTAGGCTAGTGATCTCCATTGCACTAAGGAGGTGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGC

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_18

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

151

Start:

33374339

End:

33374489

Strand:

+

>A02_snRNA_18

ACTTACCTGGTCGGGGTCTACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTAAGGAGGGGTGCTTAGCTTAAGGTCTCCCCAAGCGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGC

Brassica juncea (Tumida_V1.5)

ID:

A02_snRNA_19

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

151

Start:

33375827

End:

33375977

Strand:

+

>A02_snRNA_19

ACTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGC

Brassica juncea (Tumida_V1.5)

ID:

A03_snRNA_20

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

167

Start:

6472831

End:

6472997

Strand:

+

>A03_snRNA_20

TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGCCCATCGGGTCACACGATATTAACTCTATTTTTTAAGGGAAGAGGTCCATTAAGATAGCTTGCTATCTGGGTCTCTACGAGTCGCCCATGCGTTGCACTAC