Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
146Start:
30752423End:
30752568Strand:
+>A01_LTR-Ngaro_1
ACAATCTCCACCACAAGGCAACAATAACAACAACAACAACAATGGTGGAAACAATGACAACAACAACAACAACAATAACAATGGTGGAGGAAGCAACAATGGTAATAACAACAACAATGGGAATAATAACAACAATAATGGCAACA
Brassica juncea (Tumida_V1.5)
ID:
A02_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
99Start:
24115958End:
24116056Strand:
+>A02_LTR-Ngaro_2
ACTACTCCACCTACTGATAATACTACTGATAATACCACTGCTAATACTACTGCTACTTCTACTGTTACTCTTACTACTGCTACTCCTACAGCTACTGCT
Brassica juncea (Tumida_V1.5)
ID:
A03_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
107Start:
10749160End:
10749266Strand:
->A03_LTR-Ngaro_3
ATACATATAAGTAGGTATGTACATATATATAATATATAAGTAGGTATGTACATATATATATATACCAAAAGGACTGATATTTGAGAAGCAATAGTGAGAACATCTGC
Brassica juncea (Tumida_V1.5)
ID:
A03_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
91Start:
21285547End:
21285637Strand:
->A03_LTR-Ngaro_4
ATGTACACATGTGAAGATGTACACGTGTACACACATAGTCTATGTCCACATGTAAACTTGTACGCATATACACATACACATACTTACATGT
Brassica juncea (Tumida_V1.5)
ID:
A03_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
307Start:
22392236End:
22392542Strand:
->A03_LTR-Ngaro_5
TTGTTGCTTCCTCCGCCGTTGTTTCCATTGTTATTATTCCCATTGTTGTTGTCATTGTTGTTATTACCATTGTTGCCATTATTGTTGTTATTACCATTGTTTCCATTATTGTTGTTATTACCATTGTTGTTATTACCATTGTTGTTGTTGTTGTTGCCATCATTGTTTCCACCATTGTTGCCATCATTGTTACTATTGCCATTGCTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTGTTGTTATTGTTATTGTTTTCTTGTTGTGGCGATGGTGGAGGTTGTGAGTCTGAAGAAGGAGGTG
Brassica juncea (Tumida_V1.5)
ID:
A05_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
104Start:
3064965End:
3065068Strand:
+>A05_LTR-Ngaro_6
GCTACTTCCTCTGCTCCAGCATTTGGTTTTACTACCTCCACTTCTGCTGCTGCAACTACTGCTTTTGCTGTACCCCAGATAGCATCAACTACTGCTACTACAAC
Brassica juncea (Tumida_V1.5)
ID:
A05_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
220Start:
6978940End:
6979159Strand:
+>A05_LTR-Ngaro_7
AAACAATGATAACAACAACAACAATGGTAATAACAACAATGACAACAACAACAATGGCGGAAACAATGACAACAACAACAGCAATGGTAATAACAACAATGATGGCAATAATGGTAACAAAAACAATGGCAATAACAACAACAATGGTAATAACAACAAGGGGAATAACAATGACAACAACAACAACAATGGGAATAATAATAACAACAAAAACAATAAC
Brassica juncea (Tumida_V1.5)
ID:
A05_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
90Start:
18676427End:
18676516Strand:
+>A05_LTR-Ngaro_8
AAGCCATAGTTTTGATATGTACATATATATATATATATATATATATGTAGATATTATAAATATGCAATCACATACATATGCATGTATATT
Brassica juncea (Tumida_V1.5)
ID:
A06_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
113Start:
1555199End:
1555311Strand:
->A06_LTR-Ngaro_9
GGAGCGGGGACGGGAAACGGCTAAATCTAAAATTTATGGATACGGGTACGGCATGGGTACGTCTATATATATATATGTGTATATATAAAAATGTGTATATATAAATATTAAAA
Brassica juncea (Tumida_V1.5)
ID:
A06_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
90Start:
28108579End:
28108668Strand:
->A06_LTR-Ngaro_10
TAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAATTATTATTATAGATTTTATTGCAGAGACTTTTGTTGTAGCTAAATTTGTTGTAGCTGT
Brassica juncea (Tumida_V1.5)
ID:
A07_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
108Start:
31555467End:
31555574Strand:
+>A07_LTR-Ngaro_11
CAACAGCAACTCCAGCAGCAGCAACAACCCCAACAACAACAGTTCCAGCAGCAACCACAGTTACAGCAGCTAGCTCAGTCCCAGCAGCAACAGCAGATAGCTCAGTCT
Brassica juncea (Tumida_V1.5)
ID:
A08_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
199Start:
738263End:
738461Strand:
+>A08_LTR-Ngaro_12
CATCTATTCCTCCAGCAACAACAGCCACAACAGTTTCATCATCCACAGCAACAACAAACCCAACAGCAGTTCCAGCCACAACAACAGCAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGTTCATTCAACAGCAGCAGTTCCATCACCAGCAACACCGTCTGCTACATTCTCCTCAGCAGCAGCAGCCGC
Brassica juncea (Tumida_V1.5)
ID:
A08_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
235Start:
16720855End:
16721089Strand:
->A08_LTR-Ngaro_13
TGTGGCAGCTGCTGAGGTGCTGACTGCTGTTGGTGTTGAGGCGCTGGCTGTGGCTGTTGCTGTTGTTGAGAAGGTGGTTGGTTTTGATGTTGCTGCTGTTGTTGCTGGTTATGTTGTTGCTGCTGCTGTTGTTGTGCACGTTGCAATAAGAGTTGTTGCATTTGTATTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTGAGATCTGTGGGTGTTGAGATTGCTGCAATTGCTGTT
Brassica juncea (Tumida_V1.5)
ID:
A08_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
225Start:
21545970End:
21546194Strand:
->A08_LTR-Ngaro_14
TGCTGCTGCTGCTGATGTTGTTGAAGCTGTGACAGCTGATGCTGCTGTTGATGTTGCTGCTGATGATGTTGGAGTTGTGACAATTGATGTTGCTGCTGCTGGAGTTGTGGCAGCTGTTGGTGTTGTTGTTGCTGCTGGATCTGCTGTTGTTGCTGCTGCTGATGGATCTGTTGTTGCTGCTGTTGTTGTTGTTGCTGCTGGTGCTGTTGCTGTTGCTGTTGCTGA
Brassica juncea (Tumida_V1.5)
ID:
A09_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
95Start:
1734489End:
1734583Strand:
+>A09_LTR-Ngaro_15
TATGGTCTAGTGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTAGGACCTTATTTTATTGTTTTTCTTTAGTTAGGAC
Brassica juncea (Tumida_V1.5)
ID:
A09_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
228Start:
34882250End:
34882477Strand:
->A09_LTR-Ngaro_16
CTGCTGCTGCTGCTGGTGATGATGATGAAGCTGTGACAGCTGTTGCTGCTGATGATGTTGGAGCTGTGACATTTGATGCTGCTGCTGCTGCTGGAGTTGTGGCAGCTGTTGCTGTTGATGATGGTGTTGCTGCTGGATCTGTTGTTGTTGTTGCTGCTGGATTTGCTGCTGCTGCTGTTGCTGCTGGATCTGTTGTTGTTGTTGGAGTTGCTGCTGTTGCTGATTTTG
Brassica juncea (Tumida_V1.5)
ID:
A09_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
104Start:
44745760End:
44745863Strand:
->A09_LTR-Ngaro_17
TAGCTGTAAAAGTTTAACTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT
Brassica juncea (Tumida_V1.5)
ID:
A09_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
111Start:
55084487End:
55084597Strand:
->A09_LTR-Ngaro_18
GTTCTTGATGAAAACCATTAATATGTTGTTGTTGTAGTTGTTGTTATTGTTGTTGTTGCTGCTGCTGTTTCTGTTGTTGTTGCTGTTGGAATGATTATTGTAATATCTATT
Brassica juncea (Tumida_V1.5)
ID:
A10_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
103Start:
1447037End:
1447139Strand:
->A10_LTR-Ngaro_19
ACCAGCACAAGACCGACAATAAGCACGAAACCTTATCAAAATTATTGAGGTATATAAATAAACTTCACTCCAAGAGCTTTATCAGCAGAGACTATAAGAGCTT
Brassica juncea (Tumida_V1.5)
ID:
A10_LTR-Ngaro_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
109Start:
12504658End:
12504766Strand:
->A10_LTR-Ngaro_20
TCTAAGAGCACCTCTAATGGAGAGTTCTACCCATTGGAGTTTTAAATATAAATATGTGTATGTATATATTATATATATATATGTAGTGGTGGGGTACACTAAGAGCCTG