ID Class Order Superfamily Length Start End Strand View
A01_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro1463075242330752568+
A02_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro992411595824116056+
A03_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro1071074916010749266-
A03_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro912128554721285637-
A03_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro3072239223622392542-
A05_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro10430649653065068+
A05_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro22069789406979159+
A05_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro901867642718676516+
A06_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro11315551991555311-
A06_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro902810857928108668-
A07_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro1083155546731555574+
A08_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro199738263738461+
A08_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro2351672085516721089-
A08_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro2252154597021546194-
A09_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro9517344891734583+
A09_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro2283488225034882477-
A09_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro1044474576044745863-
A09_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro1115508448755084597-
A10_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro10314470371447139-
A10_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro1091250465812504766-

< 1 2 3 4 > Total 4


Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

146

Start:

30752423  

End:

30752568

Strand:

+

>A01_LTR-Ngaro_1

ACAATCTCCACCACAAGGCAACAATAACAACAACAACAACAATGGTGGAAACAATGACAACAACAACAACAACAATAACAATGGTGGAGGAAGCAACAATGGTAATAACAACAACAATGGGAATAATAACAACAATAATGGCAACA

Brassica juncea (Tumida_V1.5)

ID:

A02_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

99

Start:

24115958  

End:

24116056

Strand:

+

>A02_LTR-Ngaro_2

ACTACTCCACCTACTGATAATACTACTGATAATACCACTGCTAATACTACTGCTACTTCTACTGTTACTCTTACTACTGCTACTCCTACAGCTACTGCT

Brassica juncea (Tumida_V1.5)

ID:

A03_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

107

Start:

10749160  

End:

10749266

Strand:

-

>A03_LTR-Ngaro_3

ATACATATAAGTAGGTATGTACATATATATAATATATAAGTAGGTATGTACATATATATATATACCAAAAGGACTGATATTTGAGAAGCAATAGTGAGAACATCTGC

Brassica juncea (Tumida_V1.5)

ID:

A03_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

91

Start:

21285547  

End:

21285637

Strand:

-

>A03_LTR-Ngaro_4

ATGTACACATGTGAAGATGTACACGTGTACACACATAGTCTATGTCCACATGTAAACTTGTACGCATATACACATACACATACTTACATGT

Brassica juncea (Tumida_V1.5)

ID:

A03_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

307

Start:

22392236  

End:

22392542

Strand:

-

>A03_LTR-Ngaro_5

TTGTTGCTTCCTCCGCCGTTGTTTCCATTGTTATTATTCCCATTGTTGTTGTCATTGTTGTTATTACCATTGTTGCCATTATTGTTGTTATTACCATTGTTTCCATTATTGTTGTTATTACCATTGTTGTTATTACCATTGTTGTTGTTGTTGTTGCCATCATTGTTTCCACCATTGTTGCCATCATTGTTACTATTGCCATTGCTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTGTTGTTATTGTTATTGTTTTCTTGTTGTGGCGATGGTGGAGGTTGTGAGTCTGAAGAAGGAGGTG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

3064965  

End:

3065068

Strand:

+

>A05_LTR-Ngaro_6

GCTACTTCCTCTGCTCCAGCATTTGGTTTTACTACCTCCACTTCTGCTGCTGCAACTACTGCTTTTGCTGTACCCCAGATAGCATCAACTACTGCTACTACAAC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

220

Start:

6978940  

End:

6979159

Strand:

+

>A05_LTR-Ngaro_7

AAACAATGATAACAACAACAACAATGGTAATAACAACAATGACAACAACAACAATGGCGGAAACAATGACAACAACAACAGCAATGGTAATAACAACAATGATGGCAATAATGGTAACAAAAACAATGGCAATAACAACAACAATGGTAATAACAACAAGGGGAATAACAATGACAACAACAACAACAATGGGAATAATAATAACAACAAAAACAATAAC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

18676427  

End:

18676516

Strand:

+

>A05_LTR-Ngaro_8

AAGCCATAGTTTTGATATGTACATATATATATATATATATATATATGTAGATATTATAAATATGCAATCACATACATATGCATGTATATT

Brassica juncea (Tumida_V1.5)

ID:

A06_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

113

Start:

1555199  

End:

1555311

Strand:

-

>A06_LTR-Ngaro_9

GGAGCGGGGACGGGAAACGGCTAAATCTAAAATTTATGGATACGGGTACGGCATGGGTACGTCTATATATATATATGTGTATATATAAAAATGTGTATATATAAATATTAAAA

Brassica juncea (Tumida_V1.5)

ID:

A06_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

28108579  

End:

28108668

Strand:

-

>A06_LTR-Ngaro_10

TAGCTGTAGGTAAGTTGGTTGTAGCTGTAAAATTATTATTATAGATTTTATTGCAGAGACTTTTGTTGTAGCTAAATTTGTTGTAGCTGT

Brassica juncea (Tumida_V1.5)

ID:

A07_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

108

Start:

31555467  

End:

31555574

Strand:

+

>A07_LTR-Ngaro_11

CAACAGCAACTCCAGCAGCAGCAACAACCCCAACAACAACAGTTCCAGCAGCAACCACAGTTACAGCAGCTAGCTCAGTCCCAGCAGCAACAGCAGATAGCTCAGTCT

Brassica juncea (Tumida_V1.5)

ID:

A08_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

199

Start:

738263  

End:

738461

Strand:

+

>A08_LTR-Ngaro_12

CATCTATTCCTCCAGCAACAACAGCCACAACAGTTTCATCATCCACAGCAACAACAAACCCAACAGCAGTTCCAGCCACAACAACAGCAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGTTCATTCAACAGCAGCAGTTCCATCACCAGCAACACCGTCTGCTACATTCTCCTCAGCAGCAGCAGCCGC

Brassica juncea (Tumida_V1.5)

ID:

A08_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

235

Start:

16720855  

End:

16721089

Strand:

-

>A08_LTR-Ngaro_13

TGTGGCAGCTGCTGAGGTGCTGACTGCTGTTGGTGTTGAGGCGCTGGCTGTGGCTGTTGCTGTTGTTGAGAAGGTGGTTGGTTTTGATGTTGCTGCTGTTGTTGCTGGTTATGTTGTTGCTGCTGCTGTTGTTGTGCACGTTGCAATAAGAGTTGTTGCATTTGTATTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTGAGATCTGTGGGTGTTGAGATTGCTGCAATTGCTGTT

Brassica juncea (Tumida_V1.5)

ID:

A08_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

225

Start:

21545970  

End:

21546194

Strand:

-

>A08_LTR-Ngaro_14

TGCTGCTGCTGCTGATGTTGTTGAAGCTGTGACAGCTGATGCTGCTGTTGATGTTGCTGCTGATGATGTTGGAGTTGTGACAATTGATGTTGCTGCTGCTGGAGTTGTGGCAGCTGTTGGTGTTGTTGTTGCTGCTGGATCTGCTGTTGTTGCTGCTGCTGATGGATCTGTTGTTGCTGCTGTTGTTGTTGTTGCTGCTGGTGCTGTTGCTGTTGCTGTTGCTGA

Brassica juncea (Tumida_V1.5)

ID:

A09_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

95

Start:

1734489  

End:

1734583

Strand:

+

>A09_LTR-Ngaro_15

TATGGTCTAGTGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTAGGACCTTATTTTATTGTTTTTCTTTAGTTAGGAC

Brassica juncea (Tumida_V1.5)

ID:

A09_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

228

Start:

34882250  

End:

34882477

Strand:

-

>A09_LTR-Ngaro_16

CTGCTGCTGCTGCTGGTGATGATGATGAAGCTGTGACAGCTGTTGCTGCTGATGATGTTGGAGCTGTGACATTTGATGCTGCTGCTGCTGCTGGAGTTGTGGCAGCTGTTGCTGTTGATGATGGTGTTGCTGCTGGATCTGTTGTTGTTGTTGCTGCTGGATTTGCTGCTGCTGCTGTTGCTGCTGGATCTGTTGTTGTTGTTGGAGTTGCTGCTGTTGCTGATTTTG

Brassica juncea (Tumida_V1.5)

ID:

A09_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

44745760  

End:

44745863

Strand:

-

>A09_LTR-Ngaro_17

TAGCTGTAAAAGTTTAACTGTAGGTAAGTTGGTTGTAGCTGTAAAGTTGTTACTGTAGATTTTATTGCAGAGACTTTTGCTGTAGCTAAATTTGTTGTAGCTGT

Brassica juncea (Tumida_V1.5)

ID:

A09_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

55084487  

End:

55084597

Strand:

-

>A09_LTR-Ngaro_18

GTTCTTGATGAAAACCATTAATATGTTGTTGTTGTAGTTGTTGTTATTGTTGTTGTTGCTGCTGCTGTTTCTGTTGTTGTTGCTGTTGGAATGATTATTGTAATATCTATT

Brassica juncea (Tumida_V1.5)

ID:

A10_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

103

Start:

1447037  

End:

1447139

Strand:

-

>A10_LTR-Ngaro_19

ACCAGCACAAGACCGACAATAAGCACGAAACCTTATCAAAATTATTGAGGTATATAAATAAACTTCACTCCAAGAGCTTTATCAGCAGAGACTATAAGAGCTT

Brassica juncea (Tumida_V1.5)

ID:

A10_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

12504658  

End:

12504766

Strand:

-

>A10_LTR-Ngaro_20

TCTAAGAGCACCTCTAATGGAGAGTTCTACCCATTGGAGTTTTAAATATAAATATGTGTATGTATATATTATATATATATATGTAGTGGTGGGGTACACTAAGAGCCTG