Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
125Start:
1521930End:
1522054Strand:
->A01_LTR-Gypsy_1
GGAATAAAATGAGACATTTTGGAAAATCGATCCACCACCACAAAAATAGAGTCATTACCCCGTTGAGTACGCGGAAGTCCTAACACAAAATCCATACTTATATCCGTCCACGGCTGAGTAGGTGT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
477Start:
1523051End:
1523527Strand:
->A01_LTR-Gypsy_2
GATCACATATCCTAAGAACAATACATGGTCTGTACCAAATTGACACTTCTGCTTGGCGGCGAATAGTCTTTCTTTGCGTAGGACGCTCAACACTTCACGGATGTGGCCTAGGTGGTCGTCCAAGGAAGAGCTAAATATAAGAATATCATCAAAATAGACCACCACAAATTTTCCAATGAAAGGACGAAGTGCTTGATTCATAACTCGCATGAATGTGCTCGGTGCGTTAGACAATCCAAAGGGCATAACGAGCCATTCAAATAAACCTTCCCGAGTTTTGAAAGCTGTCTTCCACTCATCACCAGGACGAATTCGAATCTGGTGATAACCACTCTTAAGATCAATTTTGGAGAAGATGGTTGCAGTGCCAATTTGATCTAGTAGATCATCGAGGCGTGGAATAGGAAAACGATAACGCACTGTTATTTTATTAATAGCACGACTATCGACACACATTCGCCAAGATCCATCTTTCTT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
127Start:
2325819End:
2325945Strand:
->A01_LTR-Gypsy_3
TTGTCCATCCGTCTGTGGGTGGTACCGGTGCTAAGGCTGAACCTTGGTTCCAATGCTCTTTGAAACGCCTGCCAAAAAGTTGAGGTAAACTTCGGGTCCCGGTCAGATACTATGCTTACGGTACCCC
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
621Start:
2327101End:
2327721Strand:
->A01_LTR-Gypsy_4
CCAGGAAACTTCTACTTCTGGTGCGTTCTTGGTGTGGCCATTTTGTGATTGGGTGATCTTCTCGGGTCCACCGCTTCCCTGCCTCGGAAGATACATGCCTAGGAACCCAATCTTACGTTGCCAGAACTACACTTGCTAAGCTTAGCATATAACCCCTGCTCCCTTAACTTGTCCACACATACTCAAATGGCGTTGTGGTCCTCCGGCTCTTGGAGTAAATTAAGATATCGTCGATGAAGACAATCACACACTGTCCAGATAATCTCTGAAAATATCATTCATTAGCCCCATGAAAGCTGCCGGCGCTTCGTCAGCCAAAGGGCATTACTACGAATTCGTAGTGTCCGTACCGGGTACGAAAAGCCGTCTTCCTAATATCCCCTTCGTGAATAGGATTTGGTGATAACCCAAGCAAGGTCGATCTTTGGAACCAGTGGCCCCCTCCAGCTGATCCATAAGTTCGTCTATACGGGGTAGGGGGTACTTATTTTTAACGGTCACCTTGTTTAATCCCCGTAGTCGATGCACAGTCAGGCTCCCATCCTTCTTCTTTACAAAGAGCACGGGCGCCCCCAAGGCGAGCTACTCGGACGTATGAATCCCTTTTCCACTAGTTCTTCC
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
136Start:
3065933End:
3066068Strand:
+>A01_LTR-Gypsy_5
GGATATTATGAGTTCTTAGTGATACCATTTGGGTCGACAAAGGCACCGTTGCATTCATGAAGATATGAATGACGTTTTCGTGAACATTTGGATAGGTGTGCGATTGTATTCATCAACGACATCCTGAACTATTTTG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
96Start:
3799616End:
3799711Strand:
->A01_LTR-Gypsy_6
AGGAATAAAATGCACCATCTTGGAGAAACGATCCACCACGACAAAGATTGAATCATTGCCACGTTGTGTTCGTGGAAGACCAAGGACGAAATCCAT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
611Start:
3800537End:
3801147Strand:
->A01_LTR-Gypsy_7
GCTGAAATTATGCACGAACCGACGATAAAAAGACGCCAAGCCATGAAAGCTTCACACCTCTGTGATTATTGTTGGAGTCGGCCAAGATGCGACTGCGGCTACTTTCTGTGGGTCTACACGTAGGCCTGCGACTGAGCAACATATCCGAGAAACAAGATCTGCGATGCACCAAAGTCGCATTTATGTTTTGCAACATAAAGTTTCTCAAGTCGCAGAGCGTGTAACATGTCTCGAATGTGCTCCAGATGGTCTGGTAGCGATGTACTGAAGATTAGGATGTCATCAAAATAGATAACTACAAACCGTCCAATAAACGGACGAAGAGCTTGATTCATGACGCGCATAAACGTGCTAGGAGAATTAGATAATCCAAAAGGCATCACTAACCACTCAAACAAACCTTCGCGCGTCTTGAAAGATGTTTTCCACTCATCACCCGGTCGTATACGAATTTGATGATAGCCACTTTTAAGGTCTAACTTCGTAAATATAGATGCTTTTCCGATTTGATCCAGGAGGTCATCGAGTCATGGAACCGGAAATCAGTATCGCGTTGTGATCTTGTTTATTGCACGACTATCCACACACATACGCCAAGCTTTATCTTTCTT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
921Start:
4568873End:
4569793Strand:
->A01_LTR-Gypsy_8
AAAACTGCACCTAGGCCATAACCTGAAGCATCAGATTCCACAATGAACATCTGATTGAAGTCTGGAAGCGCCAAGACTGGTGTAGTAGTCATTGCTATCTTCAATTCCTCAAAAGCAGTTTGAGCTACTTGCGACCAGATAAATAGCTCTTGCTTCAGCAATTCTGTTAAAGGCCTTGCAAGCATCCCATAGCTCTGCACGAAGCGCCTATAGTATCCAGTCAAGCCGAGAAACCCCCTCACATCCTTCACAGTTCTCGGTACTGGCCAGTTGACAACTGATTCTATCTTCTTTGGATCAGTGGAAACGCCCTTTGCGGAAATAATATGGCCCAAGTACTCCACTTGATGTTGACCAAACGCACACTTCTTTCTGTTAGCAAAAAGTTTATGTTCCTCAAAGACTCGAAAAACCGCTGCCACATGCTCCAAATGTTCCTCCATAGATGAACTAAAGATCAGTATATCATCAAAAAATACCAGCACAAATTTTCTCAAAATTTTCTGGAACACTTCGTTCATGAGAGATTGGAAGGTTGCTGGTGCATTCATCAAGCCAAAAGGCATTACCAAGAATTCATAGTGGCCTTCATGAGTTCTGAATGCTGTCTTCTCTACATCCTCTTCCTTCATACGTATTTGATGATAACCAGATCTTAAGTCTAATTTGGTGAAGTATTTAGCCCCATTGAGTTCGTCAAGTAACTGATCAATCATGGGAATAGGATATTTATCCGGTATTGTAGCTCTGTTCAACATCCTATAATCCACACAGAATCGCCACGTCTTATCTTTCTTCTTCACCAACAGTACTGGACTTGAGTAAGGACTGTGGCTTGGCCTGATAATTCCCGTCGCTAACATCTCCACTACGCTCTTTTCCATAACCTCTTTGTGTACCTGCGGATAACGGTAGGGTCTT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
96Start:
6039334End:
6039429Strand:
->A01_LTR-Gypsy_9
TTCAACCCATTTGGTGAAGTAGTCAGTGAGGACCAGGATGAACTTCTTTTGTCGAGATGCCGGCATTGGACCAATGATGTCCATTCCCCATCTCAT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
87Start:
6041231End:
6041317Strand:
->A01_LTR-Gypsy_10
CGCTGGTAGGTCGCACCGGCGTTCTTTAGCCCGAAGGGCATCACCTTGTAGCAATAAGTCCCTCTGTCGGTGATGAATGCCGTCTTC
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
680Start:
7537887End:
7538566Strand:
+>A01_LTR-Gypsy_11
ATCATCCAAGAGAGCAACAGCCCGTTCTCTAGTCCCGTCTTGTTGGTACGCAAGAAGGACGGTAGTTGGAGATTCTGTGTCGACTACAGGGCACTGAATAAAGCAACGGTAGCGGACAAGTACCCGATTCCCATGATAGATCAGTTGCTCGACGAGTTGCAAGGAGCAAAGGTTTTCTCTAAACTGGACTTAAGAGCGGGGTATCATCAAATACGTGTGCGCAGTGAGGATGTGCCAAAGACGGCTTTCAGAACATATGATGGGCATTATGAGTTCCTTGTCATGCCTTTTGGGTTGACAAACGCACCGGCGACCTTCCAAGCGCTGATGAATGAAGTCTTCAGGCCTTACCTAAGGAAGTTCGTACTGGTGTTCTTCGACGACATACTCGTTTACAGTCAGAACGAAGAAGAGCATCACCACCATCTGCGGGAGGTCTTAGCAGTACTGGAGCGTCACCAATTGTATGCTAACCGCAAGAAGTGCAGTTTTGGGAGCAAAAAGATAGAATACTTGGGGTACATTATAACGGAGGAAGGAGTTTCTGCGGATGGGGAAAAAATAGAAGCTATGGTGGCGTGGCCAGAACCGAGAAACATCAAAGAGTTGCGGGGTTTTTTGGGGTTAACGGGCTACTACAGAAAGTTCGTTAAGGAGTATGGACTGATAGCAAGAGCCCT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
100Start:
8520714End:
8520813Strand:
+>A01_LTR-Gypsy_12
ATGCCCCTCTTCTTATACTTCCAGATTTTAATAAAACCTTTGAGATTGAATGTGATGCTTCTGGTATTGGAGTGGGTGTGTTTTGATGCAGGAAAAGAGA
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
341Start:
8736636End:
8736976Strand:
->A01_LTR-Gypsy_13
CAGGAATATCCGTCGAAGTACACCACAACAAACTTGCCGATGAATGGTCTGAGGGCCTGATTCATGATGCGCATAAAAGTACTTGGCGCATTGGAGAGGCCGAAGGGCATGACTAACCATTCGAATAGACCTTCTCGAGTTTTGAAGGCTGTCTTCCACTCATCACCTGGTCGAATTCTGATTTGGTGGTAACCGCTTTTCAAGTCAATTTTTGAAAAGACAGTCGCAGAGCCAATCTGGTCGAGCAAGTCGTCGAGTCTGGGGATGGGGAAGCGATATCGAACTGTTATTTTGTTCACAGCTCGACTGTCCACGCACATGCGCCACGTGCCATCTTTCTT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
719Start:
8738408End:
8739126Strand:
->A01_LTR-Gypsy_14
GGCGCCGTTGTTAACTTTTCCTTGATGAGGTTGAACGCCTCTGTCGCTGCCTGTGTCCACTCGAACTTCCCTTCGCGCATGCAGCTTGTAATGGGCGCCATGATGGAGCTAAAGTGGCTCACGAACCTCCTATAAAAGGATGCAAAGCCGTGGAAGCTACGCACTGCAGACACTGTTGTTGGGATTGGCCACGAGCGCACTGCTTCAACTTTGGAGGTATCCATTGCTAGACCTCGAGCTGAGACTACGTATCCTAAGAACAGGACTTCGGAGACACCGAATTCACATTTGTGGCTTGCTGCGAACAGCTTTTCTTGTCGCAGAATCGCCAAGACCTGCCGCAAGTGCACTGCATGTTCAGCCAAGGAAGGACTGAAGATAAGTATGTCGTCGAAGTACACCACAACAAACTTGCCGATGAATGGTCTGAGGGCCTGATTCATGATGCGCATAAAAGTACTTGGCGCATTGGAGAGGCCGAAGGGCATGACTAACCATTCGAATAGACCTTCTCGAGTTTTGAAGGCTGTCTTCCACTCATCACCTGGTCGAATTCTGATTTGGTGGTAACCGCTTTTCAAGTCAATTTTTGAAAAGACAGTCGCAGAGCCAATCTGGTCAAGCAAGTCGTCGAGTCTGGGGATGGGGAAGCGATATCGAACTGTTATTTTGTTCACAGCTCGACTGTCCACGCACATGCGCCACGTGCCATCTTTCTT
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
85Start:
10472102End:
10472186Strand:
->A01_LTR-Gypsy_15
CTCTGTTTGCCCATCACTCTGTGGGTGGTAAGCAGTAGACATGTTCAAAGCCACTCCCTGTAGACTGAACAACTCTTTCCAAAAG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
85Start:
10489404End:
10489488Strand:
->A01_LTR-Gypsy_16
CTCTGTTTGCCCATCACTCTGTGGGTGGTAAGCAGTAGACATGTTCAAAGCCACTCCCTGTAGACTGAACAACTCTTTCCAAAAG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
943Start:
10490426End:
10491368Strand:
->A01_LTR-Gypsy_17
CCTCTTGCATCAACACAGCCCCTATTCCCTGACCACAAGCATCAGTTTCAACGACAAAAGGTTTGTCAAATCGTGGCAAAGCCAACACTGGCGCTTCACATAAAGCCTTCTTCAAAGTACCAAAAGCTGTCTCTGCCTCTTCAGACCATTCAAAACAATTTTTCTTCGTTAAAACCGTGAGAGGTCTAGCAATCGTACCAAAGCTCATCACAAATCTTCTATAGTACCCTGCTAAACCCAAAAATCCTCTCAACGCCTTCAGTGTCGATGGGTTCGGCCACTCCACAATGGCTTTAATCTTCTGAGGATCAGTTGAAACCCCCGCTTCTTGTATAAAATGTCCCAAATACTCCACCCTATCAGTAGCAAACGCGCACTTACTATGCTTTGCAAACAACTGATTTCTTCTCATAAGCTCCAATACACTCTGTAAATGAACGACATGTTCCTCCAAAGAAGAGCTGTAAACCAATATATCATCAAAAAATATGAGGACACACTTCCGCAACAGCTCACCAAACACTGTGTTCATTAAGCTCTGGAATGTCGCAGGTGCGTTTGTTAACCCAAACGGCATAACCAGATACTCAAAATGACCGCTGTGAGTTTTGAAGGCTGTCTTGTGGATATCAGATGGATCCATCCTCACCTGATGATATCCTGCCCGCAAATCGATCTTAGAAAACACCTTTGCACCCCCAAGTTCATCCATAAGATCCTCAATTAACGGAATAGGAAAACGATCTTTAACCGTCATACCATTAAGGCCTCTATAATCCACACACAAACGCCAACTCCCATCCTTCTTTTTTACCAACACCACCGGCGAAGCATACGAACTGGAACTGGACTGTATAGTTCCTGCTCCCAATAATTCCTTCACCATCTTATCAATCTCATTCTTTTGATGTACTGCATAACGATAGGGTCGCTGGTTAACCGG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
85Start:
11180255End:
11180339Strand:
->A01_LTR-Gypsy_18
CTCTGTTTGCCCATCACTCTGTGGGTGGTAAGCAGTAGACATGTTCAAAGCCACTCCCTGTAGACTGAACAACTCTTTCCAAAAG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
943Start:
11181277End:
11182219Strand:
->A01_LTR-Gypsy_19
CCTCTTGCATCAACACAGCCCCTATTCCCTGACCACAAGCATCAGTTTCAACGACAAAAGGTTTGTCAAATCGTGGCAAAGCCAACACTGGCGCTTCACATAAAGCCTTCTTCAAAGTACCAAAAGCTGTCTCTGCCTCTTCAGACCATTCAAAACAATTTTTCTTCGTTAAAACCGTGAGAGGTCTAGCAATCGTACCAAAGCTCATCACAAATCTTCTATAGTACCCTGCTAAACCCAAAAATCCTCTCAACGCCTTCAGTGTCGATGGGTTCGGCCACTCCACAATGGCTTTAATCTTCTGAGGATCAGTTGAAACCCCCGCTTCTTGTATAAAATGTCCCAAATACTCCACCCTATCAGTAGCAAACGCGCACTTACTATGCTTTGCAAACAACTGATTTCTTCTCATAAGCTCCAATACACTCTGTAAATGAACGACATGTTCCTCCAAAGAAGAGCTGTAAACCAATATATCATCAAAAAATATGAGGACACACTTCCGCAACAGCTCACCAAACACTGTGTTCATTAAGCTCTGGAATGTCGCAGGTGCGTTTGTTAACCCAAACGGCATAACCAGATACTCAAAATGACCGCTGTGAGTTTTGAAGGCTGTCTTGTGGATATCAGATGGATCCATCCTCACCTGATGATATCCTGCCCGCAAATCGATCTTAGAAAACACCTTTGCACCCCCAAGTTCATCCATAAGATCCTCAATTAACGGAATAGGAAAACGATCTTTAACCGTCATACCATTAAGGCCTCTATAATCCACACACAAACGCCAACTCCCATCCTTCTTTTTTACCAACACCACCGGCGAAGCATACGAACTGGAACTGGACTGTATAGTTCCTGCTCCCAATAATTCCTTCACCATCTTATCAATCTCATTCTTTTGATGTACTGCATAACGATAGGGTCGCTGGTTAACCGG
Brassica juncea (Tumida_V1.5)
ID:
A01_LTR-Gypsy_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
345Start:
11942993End:
11943337Strand:
->A01_LTR-Gypsy_20
AAAGATCAAAATATCATCAAAATAAACGACCACAAATTTGCCAATAAAAGAATGCAAAGATTGGTTCATGACGCGCATAAAGGTGCTCAGAGAATTTGACAAACCGAAAGGCATGACAAGCCATTCAAAAAGTCCTTCCCGAGTTTTAAATGTCGTCTTCCACTCATCTCATGGCCTGATTCGTATCTGATGATATCTTCTTCGAAGGTCAAGCTTAGAGAAAATCATTGCAGTGCTTATCTGGTCCAATAGATAATCAAGATGAGGGATGTGAAATCTGTAGCGCACTGTTATCTTATTAATAGCACGACTATCAACACAAATTTTCCACGAGCCATCTTTCTT