ID Class Order Superfamily Length Start End Strand View
A01_LTR-Copia_1 RetrotransposonsLTRLTR-Copia14419138991914042-
A01_LTR-Copia_2 RetrotransposonsLTRLTR-Copia13319149621915094-
A01_LTR-Copia_3 RetrotransposonsLTRLTR-Copia15626083652608520-
A01_LTR-Copia_4 RetrotransposonsLTRLTR-Copia17732570023257178+
A01_LTR-Copia_5 RetrotransposonsLTRLTR-Copia46234175883418049-
A01_LTR-Copia_6 RetrotransposonsLTRLTR-Copia18334186693418851-
A01_LTR-Copia_7 RetrotransposonsLTRLTR-Copia18334282623428444+
A01_LTR-Copia_8 RetrotransposonsLTRLTR-Copia47834290643429541+
A01_LTR-Copia_9 RetrotransposonsLTRLTR-Copia18639731293973314-
A01_LTR-Copia_10 RetrotransposonsLTRLTR-Copia9460682496068342+
A01_LTR-Copia_11 RetrotransposonsLTRLTR-Copia9460701226070215+
A01_LTR-Copia_12 RetrotransposonsLTRLTR-Copia9161961026196192+
A01_LTR-Copia_13 RetrotransposonsLTRLTR-Copia14183616158361755+
A01_LTR-Copia_14 RetrotransposonsLTRLTR-Copia2991139517511395473+
A01_LTR-Copia_15 RetrotransposonsLTRLTR-Copia4731143338111433853-
A01_LTR-Copia_16 RetrotransposonsLTRLTR-Copia2731154184711542119-
A01_LTR-Copia_17 RetrotransposonsLTRLTR-Copia4921159798611598477-
A01_LTR-Copia_18 RetrotransposonsLTRLTR-Copia1351161932211619456+
A01_LTR-Copia_19 RetrotransposonsLTRLTR-Copia1671184396311844129-
A01_LTR-Copia_20 RetrotransposonsLTRLTR-Copia1741203081912030992-

< 1 2 3 4 5 > Total 2416


Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

144

Start:

1913899  

End:

1914042

Strand:

-

>A01_LTR-Copia_1

TGTTTTAGTCCATAGAGAGCTTTGTGCAGCTTATAGACCATCCCTTCCTCCTTTGAGACTTCATATCCCTGAGGTTGTTCCACATATACATCCTCTTCTAGCTTTCCATGTAAGAATGCAGACTTGACATCTAACTGATAAACT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

133

Start:

1914962  

End:

1915094

Strand:

-

>A01_LTR-Copia_2

GAACATGATTTGCCCATTGCACAGCTTCAGGCCAGAATGATCTGGGTATCTCTTTCTCTCGCAGAACCGTCCTCACCATATTCATGATGGTTCGATTTTTCCTCTCAGCTACTCCATTCTGCTGTGGAGTGTA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

156

Start:

2608365  

End:

2608520

Strand:

-

>A01_LTR-Copia_3

GTTCCATCTCCTTGGAGATTGCTTCAAACCATACAGAGACTTTCTTAGCAGGCACACTTTGTTCTCTGTTCCTGGCTTTATAAATCCCTCAGGCTGTTCCATTAGGATTCTTTCTTCCAAGCTTCCATGTAAGAACGCAGTTTTAACATCCATCTG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

177

Start:

3257002  

End:

3257178

Strand:

+

>A01_LTR-Copia_4

TCAAAGCACTAAGGACAGATAATGGTCTTGAATACTGTAACAAAGTATTTGATGATTTCTGTAAGGGAAAAGGAATTCTAAGACACAAGACTTGTCCTTATACCCCGCAGCAAAATGGAGTAGCTGAGAGGCTTAACAGAACCGTTTTGGAGAAGGTAAGAAGTCTCCTAAGTGAGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

462

Start:

3417588  

End:

3418049

Strand:

-

>A01_LTR-Copia_5

GATTGCTTTAAACCATAAAGTGATCTCTTCAATAGACACACTTTGTCTCCCTTCTTGTAACCCTCTGGCTGTTCCATCAAAATTCTTTCATCTAGATTTCCATGTAAAAATGCCGTTTTTACATCTAATTGTTCGAGCTCCAGATTCTGATGAACAACCATAGACAGAAGAAGCCTTATTGTAACATGTTTCACTACCGGTGAGAAAACCTCGTGATAATCAATTCCCTCAATCTGAGAATAACCTTTAGCTACAACCCTTCCTTTGTATCTTTTATCTTCTCCACCTGGAACTCCAGGTTTGATCTTATATATCCACTTGCAGCCAATAGTTCTTTCTCCTTCTGGTCTGTCAATCAGAATCCATGTATGATTCTTTTCCAAAGACTCCATCTCCTCATCTGAAGCTGCTCGCCACTTCTTTCCATTTTTACTTCGAATAGCTTCACTGAAAGTCAGCGGT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

183

Start:

3418669  

End:

3418851

Strand:

-

>A01_LTR-Copia_6

TCTCACTTAGGAGACTTCTTACCTTCTCCAAAACGGTTCTGTTAAGCCTCTCAGCTACTCCATTTTGCTGCGGGGTATAAGGACAAGTCTTGTGTCTTAGAATTCCTTTTCCCTTACAGAAATCATCAAATACTTTGTTACAGTATTCAAGACCATTATCTGTCCTTAGTGCTTTGAGACTCT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

183

Start:

3428262  

End:

3428444

Strand:

+

>A01_LTR-Copia_7

AGAGTCTCAAAGCACTAAGGACAGATAATGGTCTTGAATACTGTAACAAAGTATTTGATGATTTCTGTAAGGGAAAAGGAATTCTAAGACACAAGACTTGTCCTTATACCCCGCAGCAAAATGGAGTAGCTGAGAGGCTTAACAGAACCGTTTTGGAGAAGGTAAGAAGTATCCTAAGTGAGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

478

Start:

3429064  

End:

3429541

Strand:

+

>A01_LTR-Copia_8

ACCGCTGACTTTCAGTGAAGCTATTCGAAGTAAAAATGGAAAGAAGTGGCGAGCAGCTTCAGATGAGGAGATGGAGTCTTTGGAAAAGAATCATACATGGATTCTGATTGACAGACCAGAAGGAGAAAGAACTATTGGCTGCAAGTGGATATATAAGATCAAACCTGGAGTTCCAGGTGGAGAAGATAAAAGATACAAAGGAAGGGTTGTAGCTAAAGGTTATTCTCAGATTGAGGGAATTGATTATCACGAGGTTTTCTCACCGGTAGTGAAACATGTTACAATAAGGCTTCTTCTGTCTATGGTTATTCATCAGAATCTGGAGCTCGAACAATTAGATGTAAAAACGGCATTTTTACATGGAAATCTAGATGAAAGAATTTTGATGGAACAGCCAGAGGGTTACAAGAAGGGAGACAAAGTGTGTCTATTGAAGAGATCACTTTATGGTTTAAAGCAATCTCCAAGAAAATAGAAC

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

186

Start:

3973129  

End:

3973314

Strand:

-

>A01_LTR-Copia_9

TGAACCAGGCCCTTGGGGCTTGTTTTAAGCCATAGAGGGCTTTGTGAAGCTTATAGACCATGTCTTCTTTTCCTTTTACCTCATAGCCTTGAGGCTGCTCCACAAATACTTCTTCCTCCAACTTTCCATGTAGGAAGGCAGACTTGACATCTAGTTGATAAATTCCCCATCCATTCTGAGCAGCTA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

94

Start:

6068249  

End:

6068342

Strand:

+

>A01_LTR-Copia_10

TTCAAGATGAAAGACTTGGGTAAACTCAAATACTTCCTGGGTTTGGAGGTTGCAAGAGGACCTGAAGGTATCTTTGTTTCTCAGAGGAAATATG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

94

Start:

6070122  

End:

6070215

Strand:

+

>A01_LTR-Copia_11

TTCAAGATGAAAGACTTGGGTAAACTCAAATACTTCCTGGGTTTGGAGGTTGCAAGAGGACCTGAAGGTATCTTTGTTTCTCAGAGGAAATATG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

91

Start:

6196102  

End:

6196192

Strand:

+

>A01_LTR-Copia_12

GACCTAGAAATCCACCAAATGGATGTAAAAACTGCTTTTCTAAATGGTGATTTAGAAGAGAAAATTTACATGAAACAACCTGAAGGTTTTG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

141

Start:

8361615  

End:

8361755

Strand:

+

>A01_LTR-Copia_13

GGTAAACACCCTGTTGGTTGTAAGTGGATTAATACTTACAAGTTTAATCCAGATGGAACAGTGGAACGACCGAAGTCTCGTCTTGTTGCTAAAGGTTACACTCAGTTAGAAGGTTTGGATTACTTGGATACTTTCTCGCCA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

299

Start:

11395175  

End:

11395473

Strand:

+

>A01_LTR-Copia_14

GATCTCGATGACGGGAGGAGCACGTCAGGACATGTATTCTACTACGGTTCATCACTAATCACTTGGACATCGCAGAAGCAGCAGACAGTTGCATTGTCATCATGTGAAGCAGAGTTCATGGCAGCAACAGAAGCAGCAAAGCAAGCTATATGGATCAAGGAGTTGTTGAGTGAGATACTAAGCAAAAAAGGCGAGAAGGTCAAGCTTAGGATTGACAACAAATCAGCCATTGCTCTAACGAAGAATCCAGTTTTCTATGGAAGGAGTAAGCATGTACTCAAAAAGTATCACTTCATTCG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

473

Start:

11433381  

End:

11433853

Strand:

-

>A01_LTR-Copia_15

TGATCAAAACATTTGTTCCACTGACGTGGTGCCTGCTTCAAACCGTAGAGAGACTTCACCAACTTGCAGACCTTATCTTCATGCCCTTTTACTATATACCCCTCTGGCTGATCCATATATATATATCTTCATCTATAGTGCCGTGTAAAAACGCTGTCTTAACGTCTAACTGTTCCAGCTCCAGATCTTTATCCACCACGATTGATAGCAGCAATCGTATTGAAACATGTTTGACTACTGGAGAAAAAATCTCCTGATAATCCACACCTTCACGCTGTGAGTATCCTTTTGCGACTAACCTCGACTTGTGCCTTGGTTTCTCAATTCCCGGTATGCCTGGTTTAAGTTTATAAATCCACCTGCATCCAATAGCCTTCTTGCCTTCTGGTAAATCACTTAGGAACCAAATCTTATTTTTTTTAAGAGAGTCCATCTCTTCATCCATTCCTGCGTTCCATTTCTTCCAATCTTTG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

273

Start:

11541847  

End:

11542119

Strand:

-

>A01_LTR-Copia_16

TGCTTGAGACCGTATAGTGCTTTCTTCAATTTATATACCTTCTCTTCGCTTCCATCCACTTCAAAACCCTCTGGTTGCGTGACGTATACGGTTTCTTTTAATTCTCCATGTAGAAACGCGGTTTTGACGTCGAGATGATGGATCTCCCATCCATGAGAAGCCGCAAGATTGATCAATAGTCGTATGGTTTCAATTCTAGCCACTGGAGCAAAAACTTCTTCATAGTCTATACCCTGTTTTTGAACATATCCCTTCGCGACCAAGCGAGCTTTG

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

492

Start:

11597986  

End:

11598477

Strand:

-

>A01_LTR-Copia_17

TGATCAAAACATTTGTTCCATTGTCGTGGCGCCTGCTTCAAACCGTAGAGAGACTTCACCAATTTGCAGACCTTATCTTCCTGACCTTTTACCACATACCCCTCTGGCTGATCCATATATATATCTTCATCTATAGTGCCGTGCAGAAACGCTGTCTTAACGTCTAACTGTTCCAACTCCAGGTCTTTATCCACCACGATTGATAACAGCAATCGTATAGAAACATGTTTGACTACTGGAGAAAAAATCTCCTGATAGTCCACACCTTCACGCTGTGAGTATCCTTTTGCGACTAACCTCGACTTGTATCTTGGTTTCTCAACTCCCGGTATGCCTGGTTTTAACTTATATATCCACCTGCATCCAATAGCCTTCTTACCTTCCGGTAAAGCACTTAGAAACCAAGTCTTATTCTTCTTAAGAGAGTCCATCTCTTCATCCATTCCTGCGTTCCATTTCTTCCAATCTTTACTCCTCATTGCTTCCTCAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

135

Start:

11619322  

End:

11619456

Strand:

+

>A01_LTR-Copia_18

TGTTGCTAAAGGATACACACAGAAGGAGGGTTTAGACTACACTGAGACATTCTCACCAGTAGCTAAGCTCACTACTGTTCGGTTTCTATTGAAGGTAGCTGCATCTCGGAAATGGTTTCTTCATCAACTTGATAT

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

167

Start:

11843963  

End:

11844129

Strand:

-

>A01_LTR-Copia_19

TTGTTTCAGTCCATAAATTGATTTCTTTAGTTTGCAGACCATGTCTTCCTGACCTTCGATTATGAAGCCTTCAGGTTGCCGCATAAAGACTTCTTCTTGTAAGTCTCCATTAAGAAAGGTAGTTTTCACATCCATTTGGTGCAACTCAATATCATACTGAGCCACCA

Brassica juncea (Tumida_V1.5)

ID:

A01_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

174

Start:

12030819  

End:

12030992

Strand:

-

>A01_LTR-Copia_20

TTTTGTTCCACTGGCGTGGAGACTGCTTCAGACCATATAAGGACTTCTTCAGTAGACACACTTGATGTTCCTTTCCTTTAACCTCATACCCTTCAGGCTAATACATGCAAAGATCCTCCTCCAAACTCCCATGAAGGAAAGTCGTTTTAACATCCATTTGTTCCAATTCAAGAT