TBGR-Browse-Bju-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_LINE_1	Retrotransposons	LINE	LINE	121	736177	736297	+
A01_LINE_2	Retrotransposons	LINE	LINE	115	3649390	3649504	+
A01_LINE_3	Retrotransposons	LINE	LINE	106	6118372	6118477	+
A01_LINE_4	Retrotransposons	LINE	LINE	84	6293008	6293091	+
A01_LINE_5	Retrotransposons	LINE	LINE	115	6396999	6397113	+
A01_LINE_6	Retrotransposons	LINE	LINE	83	9923349	9923431	-
A01_LINE_7	Retrotransposons	LINE	LINE	88	12028705	12028792	+
A01_LINE_8	Retrotransposons	LINE	LINE	83	12323617	12323699	+
A01_LINE_9	Retrotransposons	LINE	LINE	110	21222831	21222940	-
A01_LINE_10	Retrotransposons	LINE	LINE	82	23846682	23846763	-
A01_LINE_11	Retrotransposons	LINE	LINE	115	25072746	25072860	-
A01_LINE_12	Retrotransposons	LINE	LINE	92	29041313	29041404	-
A01_LINE_13	Retrotransposons	LINE	LINE	108	31114832	31114939	-
A01_LINE_14	Retrotransposons	LINE	LINE	108	36627913	36628020	+
A02_LINE_15	Retrotransposons	LINE	LINE	83	6383808	6383890	-
A02_LINE_16	Retrotransposons	LINE	LINE	115	6497934	6498048	-
A02_LINE_17	Retrotransposons	LINE	LINE	82	9011972	9012053	+
A02_LINE_18	Retrotransposons	LINE	LINE	121	11437703	11437823	-
A02_LINE_19	Retrotransposons	LINE	LINE	168	11961324	11961491	+
A02_LINE_20	Retrotransposons	LINE	LINE	87	12221026	12221112	-

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

121

Start:

736177

End:

736297

Strand:

+

>A01_LINE_1

TGCTGTCTTTAGTTTGTTTGTGTTGTTGTTTTTTTTTTCCGCTACTAGTCATCTATTGTATCGTCTGTCAAAAATTGAAAATTGGTAATAATATTTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

3649390

End:

3649504

Strand:

+

>A01_LINE_2

TTGTATTTTGGTGTTGTTTAGTTGTTTTTACTTGTTCCTGGTACTAGTTTTTCTTTGTATCTTTTGTCAAAAATTCTAAAATGGTATTAAATGTAATATTCATACCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

6118372

End:

6118477

Strand:

+

>A01_LINE_3

TGTAGTCTTTAGTTTTCATTACTGTAATTCTGTTTCTTGTTAGTCTTTGTATTCTGTCACAAATCCGAAAATGGGTATAATATTTTAACATTTTACCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

84

Start:

6293008

End:

6293091

Strand:

+

>A01_LINE_4

TCCGTTTCTAGTCTTCTTCGTATTTCTGTAAAAAAAAAGAAAATTTGGTATAATAATCTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

6396999

End:

6397113

Strand:

+

>A01_LINE_5

GTTGTTGTTTAGTTAGTGTAGTTGTTTTTATTTTCTGCTTCTTGTTTACTCTGTAATTCTGTCAAAAATTAAAATTGGTAATGATATTTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

9923349

End:

9923431

Strand:

-

>A01_LINE_6

TTTTTTTTTTTTTGGTAAAATGTTAAAATATTATACCAATTTTCAAATTTGAGACAGAAGTTATAAAGATTACTAGTAGCGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

88

Start:

12028705

End:

12028792

Strand:

+

>A01_LINE_7

TTTGATCTGCTTCTTGTTGCCATTGTACTTCTGTCAAAAACTTAAAATTGGTAATAATATCTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

12323617

End:

12323699

Strand:

+

>A01_LINE_8

TCTGTTACTAGTTTGTTTTGTACTTCTGTAAAAAAATTGAAAACTTAGGTATAATAATTTAATATTTTACCAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

110

Start:

21222831

End:

21222940

Strand:

-

>A01_LINE_9

TTTTTTTTTTGGTAAAAATGTAAAGATGTTATTACCAAATTTTTACGTTTTTGACAGAAATTACAAAGATGACAAGAAACAGAGAAAACAAATATAAAAATCTAAACACA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

23846682

End:

23846763

Strand:

-

>A01_LINE_10

TTTTTTTTTTGGTAAAAATGTTAATATATTAGTACCAAGGTTTTTCGTTTTTGACAGAATTACAGCAGCGACAAAAAACGGA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

25072746

End:

25072860

Strand:

-

>A01_LINE_11

TTTTTATTTTTTGGTCAAAAGTTAAAATTCATTACCAATTTTAAGATTTTTGATAGAAAAACAGAGAAAACAAGAACGAGAATAATTTTTAAAAAAAACTAAACAGAAACTCAAA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

92

Start:

29041313

End:

29041404

Strand:

-

>A01_LINE_12

TCTTTTTTTCTTGGTAAAATATTAAAATTTATACCATTTTTGAAGATTTTACAATGATGCAGTAGCAACTTATTACAGCAAATAGAGAAACG

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

31114832

End:

31114939

Strand:

-

>A01_LINE_13

TTTTTTTTTTTTGGTAAAAATGTAAAGATATTATTACCAGTTTTAAAGTTTTTGACAGAATAACAAAGACGACAAGTAGCAGATAGCATAAAAAAAAAACTAAACACA

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

36627913

End:

36628020

Strand:

+

>A01_LINE_14

TTGTGTTTAGTTTATTTATGTTTCATCCGCTACTAGTTTTCTGTGTGCTGTCTGTAAAAAATTAAAAACTTGGTATAATAATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

6383808

End:

6383890

Strand:

-

>A02_LINE_15

TTTTTTTTTTTTCGGTAAAAATGTAAAGATATTATTACCAAATTTTTTTCGTTTTTGACAGAAGTTACAGAGATTAACAAGAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

6497934

End:

6498048

Strand:

-

>A02_LINE_16

TTTTTTTTGGTAAAATGTTAAATTTTATACCAAGTTTTAAGTTTTTGACAGCGATTACAATGATTAACAAGTAGCGGAATGCCAAAATTAAACTACACAACACAACAAAAACGAC

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

9011972

End:

9012053

Strand:

+

>A02_LINE_17

TCCGCTACTAGTTTTTCTCTGTAATCGCTGTCACAATTTAAAAATTGGTATAATATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

121

Start:

11437703

End:

11437823

Strand:

-

>A02_LINE_18

TTTTTTTTTTTTTGGTAAAATGTTAAGTATTATACCAATTTTCAATTTGTGACAGAATTTACAAAGAAACTAGTAGCAGAATGCATAATCGAAACTAAACAGACGGACTAAAAGCAACATT

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

168

Start:

11961324

End:

11961491

Strand:

+

>A02_LINE_19

CGTTTTTGCATAGTCCTCGGAGAAGCTGTAGGCTTATCTTCCCACTTACGAAGTTTGAGGGCTGGCTTCGGAAGGAGGAGCTTGTGGCAACAACGATGAGGACTCTAGTTCTTCGGATCTGCGACAATTTTTCAAATGTCCTGGTTCATTGCTAGGAATTGGTGTTTC

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

12221026

End:

12221112

Strand:

-

>A02_LINE_20

TTTTTTTGTTGGTAAAAAAAATTAAGATTTCATTACCAATTTTAAATTTTTTACAGATATTGACAGAGAATACTAGTAGCAGATCAA