TBGR-Browse-Bju-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
A01_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	87	496901	496987	+
A01_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	84	24413086	24413169	+
A02_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	90	3865179	3865268	+
A02_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	86	14132933	14133018	+
A02_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	86	14200572	14200657	+
A02_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	87	24995452	24995538	-
A03_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	82	4791635	4791716	-
A03_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	142	32654109	32654250	-
A03_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	133	37560785	37560917	-
A03_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	133	37572805	37572937	-
A03_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	89	38408626	38408714	-
A04_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	83	6002492	6002574	-
A04_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	140	7941228	7941367	-
A05_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	93	9533052	9533144	+
A05_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	93	9546488	9546580	-
A05_LINE-L1-Tx1_16	Retrotransposons	LINE	LINE-L1-Tx1	111	11846450	11846560	+
A05_LINE-L1-Tx1_17	Retrotransposons	LINE	LINE-L1-Tx1	146	13734980	13735125	-
A05_LINE-L1-Tx1_18	Retrotransposons	LINE	LINE-L1-Tx1	92	19303165	19303256	+
A05_LINE-L1-Tx1_19	Retrotransposons	LINE	LINE-L1-Tx1	93	23533541	23533633	-
A06_LINE-L1-Tx1_20	Retrotransposons	LINE	LINE-L1-Tx1	83	6885373	6885455	+

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

496901

End:

496987

Strand:

+

>A01_LINE-L1-Tx1_1

CCATTCATCCTGACAAGGCCCCGGGACCTGACGGGTTCTCAGCCGGATTCTATCAATCCTTTTGGGATGTAATCGGAGAGGATATTT

Brassica juncea (Tumida_V1.5)

ID:

A01_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

24413086

End:

24413169

Strand:

+

>A01_LINE-L1-Tx1_2

TCATTGTTTTTTTGTAAAAATGATTGTAGCAGAGAACATGGTAAATCTCTCTCTCTCTCTCTCTCGTCTCTCGTCTTCTCTCTC

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

90

Start:

3865179

End:

3865268

Strand:

+

>A02_LINE-L1-Tx1_3

TCTCTACTTCTCTCTCTCTCTTTCTCTCTCTGTTTGATTATGGGGAAAGTATGGGAGAAAGAGAGGAGAGAGCTATGTAAGACTTTTTTC

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

14132933

End:

14133018

Strand:

+

>A02_LINE-L1-Tx1_4

CCATGCCGTCTAGTAAGGCTCCAGGTCCTGATGGATTCCCGGCTGAGTTCTATCGAGCATCTTGGGATATTATTAAACAAGACTTT

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

14200572

End:

14200657

Strand:

+

>A02_LINE-L1-Tx1_5

CCATGCCGTCTAGTAAGGCTCCAGGTCCTGATGGATTCCCGGCTGAGTTCTATCGAGCATCTTGGGATATTATTAAACAAGACTTT

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

24995452

End:

24995538

Strand:

-

>A02_LINE-L1-Tx1_6

GAAAATCACCTTCAGCCTGTTAGCAAGGACTTTGGAGATCACCTTGTACATGAGGTTACAACAGGCAATAGGCCTATAATCTTTCAT

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

4791635

End:

4791716

Strand:

-

>A03_LINE-L1-Tx1_7

TTAACAGATGCGTTAGTCCTTCAGTACACAACACAAAGAGGAATGGGGAGAGAGGATCTCCTTGACGGAGTCCCCGTTGCGG

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

142

Start:

32654109

End:

32654250

Strand:

-

>A03_LINE-L1-Tx1_8

ATATTATCAGATATTAACCTTCCTGGCACAAAAGCCGACTGGGTCTCTGAGATGAGGGAAGGTAAACATATCTTCAATCTCTGACACAGAACCTTCGAAATAATTTTGTACCCAATATTACACAAACTAATCGGCCTCAATT

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

133

Start:

37560785

End:

37560917

Strand:

-

>A03_LINE-L1-Tx1_9

ATGTTATCAGAGATCTGTCTCCCAGCAACAAAGGCTGACTGAGTCTCTGATATCAATCCTGGTAGCACTTTCTTTAGTCTTTGGCATAAGACCTTAGAGATTATCTTGTAGCTGACGTTACATAAGCTAATGG

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

133

Start:

37572805

End:

37572937

Strand:

-

>A03_LINE-L1-Tx1_10

ATGTTATCAGAGATCTGTCTCCCAGCAACAAAGGCTGACTGAGTCTCTGATATCAATCCTGGTAGCACTTTCTTTAGTCTTTGGCATAAGACCTTAGAGATTATCTTGTAGCTGACGTTACATAAGCTAATGG

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

89

Start:

38408626

End:

38408714

Strand:

-

>A03_LINE-L1-Tx1_11

CTTTTTAATATTTACAATCAGTGCCTCAGTACACAATATAAATAAATAAGGTGATAGAGGATCTCCTTGCCGTAATCCCCGATGTGGAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

6002492

End:

6002574

Strand:

-

>A04_LINE-L1-Tx1_12

AAAAAATTAATTGACTTTAAATTTTCTAAAAGCACAATTTCCATGTGTCAGATTTTTATTAGTGTAATAACTTGTACTTTAGT

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

140

Start:

7941228

End:

7941367

Strand:

-

>A04_LINE-L1-Tx1_13

AATCATTATGTTATCAGAGATCTGTCTCCCAGCAACAAAGGCTGACTGAGTCTCTGATATCAATCCTGATAGCACTTTCTTTAGTCTCTGGCATAAGACCTTAGAGATTATCTTGTAGCTGACGTTACATAAGCTAATGG

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

9533052

End:

9533144

Strand:

+

>A05_LINE-L1-Tx1_14

TGTTTAAAATGCCATCAAACAATCTCCTGGACATGATGGATACATCACAAAATTCTTCAAAGCAGTTTGGCCAATCATCGGAGAAGATATTGT

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

9546488

End:

9546580

Strand:

-

>A05_LINE-L1-Tx1_15

ACAATATCTTCTCCGATGATTGGCCAAACTGCTTTGAAGAATTTTGTGATGTATCCATCATGTCCAGGAGATTGTTTGATGGCATTTTAAACA

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

111

Start:

11846450

End:

11846560

Strand:

+

>A05_LINE-L1-Tx1_16

TACAAGATTATTTCTAATGTATTATGTCAAAGATTAAAGGTCTGTCTTCCATCATTGATCTCGGAGACGCAATCGGCTTTTGTGCCTGGACGTTTAATATCTGATAATATA

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

146

Start:

13734980

End:

13735125

Strand:

-

>A05_LINE-L1-Tx1_17

AAGAATATTATCAGAGATCAACCTTCCAGCCACAAAAGCCGACTGAGTTTCGGAAATGAGCCAAGGAAGATAAATTTTTAGCCGCTGGCATAAAACTTTCGAAATAATTTTGTACCCTACATTACAAAGACTAATAGGCCTCAATT

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

92

Start:

19303165

End:

19303256

Strand:

+

>A05_LINE-L1-Tx1_18

CTGTATTAATTAATGGAACTCCATATGGTGAGTTTCAAGCCTTCAAGAGGAATAAGACAAGGATATACGTTATCTCCATATTTATTTCTTCT

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1-Tx1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

23533541

End:

23533633

Strand:

-

>A05_LINE-L1-Tx1_19

ACAATATCTTCTCCGATGATTGGCCAAACTGCTTTGAAGAATTTTGTGATGTATCCATCATGTCCAGGAGATTGTTTGATGGCATTTTAAACA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1-Tx1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

6885373

End:

6885455

Strand:

+

>A06_LINE-L1-Tx1_20

TACCAAAGAGGAGGGCACGAGTTTTTTAGATTTTCATAAACTCTCTCCAAATCTCTCCAAGTTTTCAAATCCTTGTTTTAAAT