ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Pao_1 RetrotransposonsLTRLTR-Pao823717011837170199-
ChrB02_LTR-Pao_2 RetrotransposonsLTRLTR-Pao9754623605462456+
ChrB04_LTR-Pao_3 RetrotransposonsLTRLTR-Pao1025226032352260424-
ChrB05_LTR-Pao_4 RetrotransposonsLTRLTR-Pao824925473749254818+
ChrB06_LTR-Pao_5 RetrotransposonsLTRLTR-Pao95124890124984+
ChrB08_LTR-Pao_6 RetrotransposonsLTRLTR-Pao852357297323573057-
ChrB08_LTR-Pao_7 RetrotransposonsLTRLTR-Pao852367260723672691-
ChrC01_LTR-Pao_8 RetrotransposonsLTRLTR-Pao8391695279169609+
ChrC01_LTR-Pao_9 RetrotransposonsLTRLTR-Pao912631551726315607+
ChrC01_LTR-Pao_10 RetrotransposonsLTRLTR-Pao922634350726343598+
ChrC01_LTR-Pao_11 RetrotransposonsLTRLTR-Pao825442905754429138-
ChrC02_LTR-Pao_12 RetrotransposonsLTRLTR-Pao1094072404440724152+
ChrC05_LTR-Pao_13 RetrotransposonsLTRLTR-Pao885928735559287442+
ChrC06_LTR-Pao_14 RetrotransposonsLTRLTR-Pao941570648915706582+
ChrC06_LTR-Pao_15 RetrotransposonsLTRLTR-Pao864405151944051604+
ChrC07_LTR-Pao_16 RetrotransposonsLTRLTR-Pao1094464086044640968+
ChrC08_LTR-Pao_17 RetrotransposonsLTRLTR-Pao843124222631242309+
ChrC09_LTR-Pao_18 RetrotransposonsLTRLTR-Pao872055657020556656+
Contig1573_LTR-Pao_19 RetrotransposonsLTRLTR-Pao853175531839+
Contig1573_LTR-Pao_20 RetrotransposonsLTRLTR-Pao873188331969+

< 1 2 3 4 5 > Total 15


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Pao_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

82

Start:

37170118  

End:

37170199

Strand:

-

>ChrB01_LTR-Pao_1

TTCCTTGATGAACTTGTGTTAGAAGCAGAGTCTTGATGAGTGCTTTCTTTGTTCCTTACCAATCATCTGAAGAACTAACATT

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Pao_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

97

Start:

5462360  

End:

5462456

Strand:

+

>ChrB02_LTR-Pao_2

CGATGTTTTTTTTGTCAGCAACAAAACAGATTCATATAAACTCTGTGAATCAAATTGATAGCTCCGTATCCATGTGGACAACAAACAACGTTGCTGT

Brassica carinata (v1.0)

ID:

ChrB04_LTR-Pao_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

102

Start:

52260323  

End:

52260424

Strand:

-

>ChrB04_LTR-Pao_3

TGTGTGAGGTCAAAACTGTGTGAGGTCAAAACTGTGTGAGGTCAAAACTGTGTGAGGTCAAAACTGTGTGAGGTCAAAACTGTGTGAGGTCAAAACTGTGTG

Brassica carinata (v1.0)

ID:

ChrB05_LTR-Pao_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

82

Start:

49254737  

End:

49254818

Strand:

+

>ChrB05_LTR-Pao_4

AATGTTAGTTCTTCAGATGATTGGTAAGGAACAAAGAAAGCACTCATCAAGACTCTGCTTCTAACACAAGTTCATCAAGGAA

Brassica carinata (v1.0)

ID:

ChrB06_LTR-Pao_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

95

Start:

124890  

End:

124984

Strand:

+

>ChrB06_LTR-Pao_5

TTTTCCCTGAAAACTCTAATCGAGAGATATTGCATCAAACAGCAAGGTCGAGATACTATTAAAGAAGATGAATTTAAGCAATCATCGTTGAAGAA

Brassica carinata (v1.0)

ID:

ChrB08_LTR-Pao_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

85

Start:

23572973  

End:

23573057

Strand:

-

>ChrB08_LTR-Pao_6

CTGTAAATTGAGTAATAACCTTGCGAATTCACCATTAAACTTCCAATTGTGCACTCCAACCCTAGTAAATGCAAATGGACAAATA

Brassica carinata (v1.0)

ID:

ChrB08_LTR-Pao_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

85

Start:

23672607  

End:

23672691

Strand:

-

>ChrB08_LTR-Pao_7

CTGTAAATTGAGTAATAACCTTGCGAATTCACCATTAAACTTCCAATTGTGCACTCCAACCCTAGTAAATGCAAATGGACAAATA

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Pao_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

83

Start:

9169527  

End:

9169609

Strand:

+

>ChrC01_LTR-Pao_8

AGAGCCATAATGATTATGCGACACCATTTATGTGGGACCTAAGAGACGAGTTTGGATATGTTAATGATCCTCATAATCTCTTG

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Pao_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

91

Start:

26315517  

End:

26315607

Strand:

+

>ChrC01_LTR-Pao_9

TTTCCACTGTTAGATTGAGCCCATCTTTTGACACAAGATGGAGGGTTGAGTTAGCTTTCAATGCCACGGTTTGAGGTCAATCCATCCTGTA

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Pao_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

92

Start:

26343507  

End:

26343598

Strand:

+

>ChrC01_LTR-Pao_10

TTTCCATCTGTTATATTGAGCCCATATTTTGACACAAGATAGAGCGTTGAGTTATCTTTCAATGCCACGGTTTGAGGTCAATCCATCCTGTA

Brassica carinata (v1.0)

ID:

ChrC01_LTR-Pao_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

82

Start:

54429057  

End:

54429138

Strand:

-

>ChrC01_LTR-Pao_11

TGTGTGAACTTGGAATGTCTGAGTTTGAAGATGTCTACGTTTGAAATTCTGAGCTTGAAGATGAATGAACTTGAAATGTCTG

Brassica carinata (v1.0)

ID:

ChrC02_LTR-Pao_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

109

Start:

40724044  

End:

40724152

Strand:

+

>ChrC02_LTR-Pao_12

GCAGGAACCCGGAACCTGGAGGCAGGAACCTGGAAGTCGAAAGCTGGAGTAATCTGTTCATGGAATATTTTTCCCCAACAGGAGAGATACGGGGAAATACTTGATTCCT

Brassica carinata (v1.0)

ID:

ChrC05_LTR-Pao_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

88

Start:

59287355  

End:

59287442

Strand:

+

>ChrC05_LTR-Pao_13

CCGCGAAAACGAAGTTTTCCGCCAAAACCGAAGTTTTCCGCCAAAATCGAAGTTTTCCGCCAAAATCGAAGTTTTCCGCCAAAATCGA

Brassica carinata (v1.0)

ID:

ChrC06_LTR-Pao_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

94

Start:

15706489  

End:

15706582

Strand:

+

>ChrC06_LTR-Pao_14

TATAATTATGTGTGCATATGCTTTAATATTTACTGTTGCTATAGGCACTCAATGATTCCAAGAAGCATCAGGAAAAAGGTGTCAGAGAAAAGGA

Brassica carinata (v1.0)

ID:

ChrC06_LTR-Pao_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

86

Start:

44051519  

End:

44051604

Strand:

+

>ChrC06_LTR-Pao_15

CCTACTTTGAATTTTTTACAGGACTTATTCTAAGTGACGATGAGAAGAAACTATATGCTCTCATTGAGATTGAGAAGCTTCTTAAA

Brassica carinata (v1.0)

ID:

ChrC07_LTR-Pao_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

109

Start:

44640860  

End:

44640968

Strand:

+

>ChrC07_LTR-Pao_16

TTGAAAATTCAGAGTTGAGTTTGGTGACAGCTCAAGAAGCACAAGCTGAACATACTTTACAAACTTTGGTACCTACTAAAGATTCAGAGACTGAACATTTGTCACAAGG

Brassica carinata (v1.0)

ID:

ChrC08_LTR-Pao_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

84

Start:

31242226  

End:

31242309

Strand:

+

>ChrC08_LTR-Pao_17

TTGATTCGTACTCTTCTTTTTCAGGTTTCAGGAGGAGGTTATGTCTCTACCATTGGCAGGAATCGAGGCGATTTTATCAAGTGA

Brassica carinata (v1.0)

ID:

ChrC09_LTR-Pao_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

87

Start:

20556570  

End:

20556656

Strand:

+

>ChrC09_LTR-Pao_18

GTTAGATTGAGCCCATATTTTGACACAAGATAGAACTTTGAGTTAGCTTTCTAACGCCACCGGTTTGAGGTCAATCTGCGTCCTATA

Brassica carinata (v1.0)

ID:

Contig1573_LTR-Pao_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

85

Start:

31755  

End:

31839

Strand:

+

>Contig1573_LTR-Pao_19

TTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAAT

Brassica carinata (v1.0)

ID:

Contig1573_LTR-Pao_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

87

Start:

31883  

End:

31969

Strand:

+

>Contig1573_LTR-Pao_20

CCAAAACCGAAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAACCGAGTTTTCCGCCAAAATCGCAAAA