ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro11153046235304733-
ChrB01_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro901127912311279212+
ChrB01_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro1481169889011699037-
ChrB01_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro1961169919211699387-
ChrB01_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro834455757144557653+
ChrB01_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro1585492715654927313+
ChrB01_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro1045972514959725252+
ChrB01_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro946477769764777790-
ChrB02_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro1392794643927946577+
ChrB02_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro1043164959331649696+
ChrB03_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro26032023233202582-
ChrB03_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro12359366945936816-
ChrB03_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro21668615486861763+
ChrB03_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro2352236333622363570+
ChrB03_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro1124003170440031815-
ChrB04_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro22712034941203720+
ChrB04_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro11923743692374487-
ChrB04_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro1974125147841251674-
ChrB04_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro1805400869154008870+
ChrB05_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro8270336567033737-

< 1 2 3 4 > Total 4


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

5304623  

End:

5304733

Strand:

-

>ChrB01_LTR-Ngaro_1

GGGGCGGGGACGGGAAACGGCTAAACTTAAAATTTATGGATACGGGTACGGCATGGATACGTCTATAAATAAATAAATAAATATATATATATATATATATAAATATTAAAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

11279123  

End:

11279212

Strand:

+

>ChrB01_LTR-Ngaro_2

ACAGCTACAACAAATTTAGCTACAGCAAAAGTCTCTACAATAAAATCTACAGTAACAACTTTACAGCTACAATCAACTTACCTACAGCTA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

148

Start:

11698890  

End:

11699037

Strand:

-

>ChrB01_LTR-Ngaro_3

CGCACGCACGCACGTGACAGACGCACGCACGCACGCATGCACGCACGCACGCACGCACGCACGCACGCACGCACGCATGCACGCACGCACGCACGCATGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

196

Start:

11699192  

End:

11699387

Strand:

-

>ChrB01_LTR-Ngaro_4

CGACGCACGCACGCACGCACGCACGCACGCACGCATCGCACGCACGCACGACAGACGCACGCACGCACGACAGACGCACGCACGCACGTGACAGACGCACGCACGCACGACAGACGCACGCACGCACGCATGCACGCACGCACGACAGACGCACGCACGCATGCACGCACGCACGACAGACGCACGACAGACGCAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

44557571  

End:

44557653

Strand:

+

>ChrB01_LTR-Ngaro_5

TGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

158

Start:

54927156  

End:

54927313

Strand:

+

>ChrB01_LTR-Ngaro_6

ATATATATATATATATACATATATATATATATATACATATATATATATATAGATATATATATATATATATACATATATATATATACATCCTCACCCCTCTCACTCTTATCCTCAGTATCGCTCCCATCCTCACCCTTCTAACTCTCACCTTCACCCTC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

59725149  

End:

59725252

Strand:

+

>ChrB01_LTR-Ngaro_7

ACAGCTACAACAAATTTAGCTACAGCAAAAGTTTCTACAATAAAATCTACGGTAACAATTTTACAGCTACAACCAACTTAGCTACAACTAAACTTTTACAGCTA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

64777697  

End:

64777790

Strand:

-

>ChrB01_LTR-Ngaro_8

GAGAGAGAGAGTGTGTGTTTAGACAGACAGAGAGAGAGAGAGAGAGTGTGTGTTTAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGT

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

139

Start:

27946439  

End:

27946577

Strand:

+

>ChrB02_LTR-Ngaro_9

ACAGCAGCTCCAGCAGCTGCAGCTTCATTCACAGAAACAACAACAGCATCAACAACAGCAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGATACAACAGCTTTTGCATCACCGTCTTCGACAGCAGGAACAACAA

Brassica carinata (v1.0)

ID:

ChrB02_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

31649593  

End:

31649696

Strand:

+

>ChrB02_LTR-Ngaro_10

ACAGCTACAACAAATTTAGCTACAGCAAAAGTCTCTGCAATAAAATCTACAGTAACAACTTTACAGCTACAACCAATTTACCTACAGCTAAACTTTTACAGCTA

Brassica carinata (v1.0)

ID:

ChrB03_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

260

Start:

3202323  

End:

3202582

Strand:

-

>ChrB03_LTR-Ngaro_11

GGCGAAGTCTGCTGCTGCTGATGATGTTGAAGCTGTGATAACTGATGCTGCTGTTGCTGTTGCTGCTGATGATGTTGGAGTTGTGACAATTGATGTTGCTGCTGCTGTTGCTGGAGTTGTGGCAGCTGTTGCTGTTGGTGGTGTTGCTGCTGCTGGATCTGTTGTTGCTGCTGCTGCTGATGAATCTGTTGTTGCTGCTGCTGCTGCTGGATTTGTTGTTGCTGCTGCTGCTGTTGTTGTTGGTGCTGCTGCTGTTGCTG

Brassica carinata (v1.0)

ID:

ChrB03_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

123

Start:

5936694  

End:

5936816

Strand:

-

>ChrB03_LTR-Ngaro_12

TTCGATGATGGTGTTCTTTTCTTCGATAGCTCAACGGGGGAGGAAGAAGAAGAAGAAGAGGAGGAGAAAAGTTTGATCTCTGTTGGTGGTGAAGCTGGTCCTTTGGTGCGTTGCTGTGATGGT

Brassica carinata (v1.0)

ID:

ChrB03_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

216

Start:

6861548  

End:

6861763

Strand:

+

>ChrB03_LTR-Ngaro_13

AACAGCAATTGCAGCAATCTCAACACCCACAGATCTCACAGCAGCAGCAACAACAACAGCAGCAAATACAAATGCAACAACTCTTATTGCAACGTGCACAACAGCAGCAGCAACATAATCAGCAGCAACAGCATCAACAGCAACAACAACAACATCAAAACCAACCACCTTCTCAACAACAGCAGCAGCAGCAGCCAGCGCCTCAACACCAACAGC

Brassica carinata (v1.0)

ID:

ChrB03_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

235

Start:

22363336  

End:

22363570

Strand:

+

>ChrB03_LTR-Ngaro_14

CAACAGCAACAGCAACAACCCCAACAACAGCATTTGCAGCAGCAACAACAGTTACAACAGCCAATGTTTAAGCCACTTCAGCAGCTAGGTCAATCCCAGCAGCATCAGCAGCTAACTCAGTCTCAGCAGCAACAACAGTAGCTAACTCAGTCTCAGCAGCAACAGCAGCAGCTACAACAACATGAGCTGCTTCAACAGCCACAACAACAGCAACAGCAGCAACAATTAACAACCT

Brassica carinata (v1.0)

ID:

ChrB03_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

112

Start:

40031704  

End:

40031815

Strand:

-

>ChrB03_LTR-Ngaro_15

TTGTTGAGATTCTTGTTGTTGTTGTTGTTGCTGTTGCTATTGTTGAAGGGTTTCTGATATTGTGAATTCTGATTGTAGTTGCTCCTCTGACTGTTGCCATAGAAGTTCCTGT

Brassica carinata (v1.0)

ID:

ChrB04_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

227

Start:

1203494  

End:

1203720

Strand:

+

>ChrB04_LTR-Ngaro_16

CTTCGGTACACCCACCAATCAAGACCATCTATTCCTCCAGCAGCAACAACAACAACAGCCACAGTTTCATCATCAACAACAACAACAGACGCAGCAGCAACAGTTCCAGCCACAGCAACAACAACAACAACAACAAGAGATGCAGTTCCAGCAATTCCAACAACAACAACAGTTCATTCAACAACAGCAGTTCCATCACCAGCAGCACCGTCTCTTACATTCTCCTC

Brassica carinata (v1.0)

ID:

ChrB04_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

119

Start:

2374369  

End:

2374487

Strand:

-

>ChrB04_LTR-Ngaro_17

CTTTATCAAGAGATTGTAGAGAGAGAGAGAGAGAGAGAGATATATATATATACATATATATATATACATATATATATATATAGATATATATATATAGATATATATATATATATAGATAT

Brassica carinata (v1.0)

ID:

ChrB04_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

197

Start:

41251478  

End:

41251674

Strand:

-

>ChrB04_LTR-Ngaro_18

GTTGTTGCTTCCGTTGTTATTATTCCCATTGTTGTTGTCATTGTTGCCATCATTGTTGTTATTACCATTGTTGTTGTTGTTGTCATTGTTTCCACCGTTGTTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTGTTGTTATTGTCTCCTTGTTGAGGAGATGGTGGAGGTTGTGAGTCTGAAGAAGGAGGTG

Brassica carinata (v1.0)

ID:

ChrB04_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

180

Start:

54008691  

End:

54008870

Strand:

+

>ChrB04_LTR-Ngaro_19

CACCGCCTTCTTCAGACTCACAATCTCCACCATCGCCACCACAAGGCAGCAACAACAACAACAACAATAACAATGGTGGAAACAATGACAACAACAATGGTGGAGGAAGCAACAGTGGTAACAACAACAATAATGGCAACAGCAACAATGGCAATAATAACAACAATAATAATGGCAACA

Brassica carinata (v1.0)

ID:

ChrB05_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

82

Start:

7033656  

End:

7033737

Strand:

-

>ChrB05_LTR-Ngaro_20

TTACGGAGGAGGACGGTGGTTGACGGCATATATACATATATGGATGTATTTATGTATGTATTTATGTATATATATATATATA