TBGR-Browse-Bca-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
ChrB01_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	90	162806	162895	-
ChrB01_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	97	3665107	3665203	+
ChrB01_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	150	6299748	6299897	-
ChrB01_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	99	16153830	16153928	+
ChrB01_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	119	37801725	37801843	+
ChrB01_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	86	57388658	57388743	+
ChrB02_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	118	1295138	1295255	+
ChrB02_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	111	6460054	6460164	-
ChrB02_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	124	26649514	26649637	-
ChrB02_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	85	34830426	34830510	+
ChrB02_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	106	56546796	56546901	-
ChrB03_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	83	8008295	8008377	-
ChrB03_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	102	16962789	16962890	+
ChrB03_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	94	19921421	19921514	+
ChrB03_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	128	35195624	35195751	-
ChrB03_LINE-L1-Tx1_16	Retrotransposons	LINE	LINE-L1-Tx1	110	35195947	35196056	-
ChrB03_LINE-L1-Tx1_17	Retrotransposons	LINE	LINE-L1-Tx1	141	52646727	52646867	-
ChrB03_LINE-L1-Tx1_18	Retrotransposons	LINE	LINE-L1-Tx1	90	53482572	53482661	+
ChrB03_LINE-L1-Tx1_19	Retrotransposons	LINE	LINE-L1-Tx1	90	54414649	54414738	+
ChrB04_LINE-L1-Tx1_20	Retrotransposons	LINE	LINE-L1-Tx1	109	5608857	5608965	+

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

90

Start:

162806

End:

162895

Strand:

-

>ChrB01_LINE-L1-Tx1_1

TTTTTTTTTTTGTAACACCTACATTATTATCAGCACAATGCAATATTGCTAGTGTAGAGCGGTAGAAGATGGCGGAGGAAGAAAACAGTA

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

97

Start:

3665107

End:

3665203

Strand:

+

>ChrB01_LINE-L1-Tx1_2

GAGGGCTTAGACAGGGTGACCCCCTTTCTCCCTACCTGTTTGTCATAGCTATGAACTGTTTATCTCTGTTATTAGATAAAGCTGCTGCTGAAGGGAA

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

150

Start:

6299748

End:

6299897

Strand:

-

>ChrB01_LINE-L1-Tx1_3

TAATCTGTTTGCAAGGACTTTCGAGATCACCTTGTATAGGATGTTACAGCAACTAATGGGACGGTAGTCTTTAATCTCCTTAGCATCATCATGATTTGGTATCAGCGTGAGAATAGTAGCATTTACGCCCCTTGGTAGGAAACCATACAT

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

99

Start:

16153830

End:

16153928

Strand:

+

>ChrB01_LINE-L1-Tx1_4

AATGTCAAGTTTCTTGAAGATAAATGTCAAGTTTCCCGAAGATAAATGTCAAGTTTCTCGATAGACATGAAGACTGACGAAAATGGAAAAAGCCTGTCT

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

119

Start:

37801725

End:

37801843

Strand:

+

>ChrB01_LINE-L1-Tx1_5

CAATACTGGCATTGATCCCAAAGAAGTTGGATTCACTGGAAATGAAAGACTATAGGCCAATCGCGTGTTGTAATGTGCTTTACAAAGTTGTCTCTAAAATTGTGGCAAACAGATTAAAG

Brassica carinata (v1.0)

ID:

ChrB01_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

57388658

End:

57388743

Strand:

+

>ChrB01_LINE-L1-Tx1_6

TAACATATGTACATTTCACACCTTAGCATTCGGAAAATGCACATGCAGGCTCCAATTTACCCTTTTTTAATTATATTAATTACTGA

Brassica carinata (v1.0)

ID:

ChrB02_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

118

Start:

1295138

End:

1295255

Strand:

+

>ChrB02_LINE-L1-Tx1_7

TACAATGGCACTGTCCAGGGTTATTTTAAAGGAAAAAGAGGCTTGAGACAAGGAGATCCACTCTCCCCTTATCTCTTTGTAATTGCAATCAATGTTGTATCTCACATGCTAAATAAGG

Brassica carinata (v1.0)

ID:

ChrB02_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

111

Start:

6460054

End:

6460164

Strand:

-

>ChrB02_LINE-L1-Tx1_8

AACAGCAACAACTACATCTTCTCCAATTATAGACCAAGCTGACTTGAAGAACTCAGTAGTATATCCATCTGGCCCAGGTGATTTGTTCGATGGCATCTTAAAAACAACAGT

Brassica carinata (v1.0)

ID:

ChrB02_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

124

Start:

26649514

End:

26649637

Strand:

-

>ChrB02_LINE-L1-Tx1_9

CAGCTCGGAAGCAAGTAAAACGTTCCATGAGAAGGCGATCCTTGACAAAAGCTGATTGGTTTGGGGATATAAACTTCGGAAGCACCTTTTTCAGCCTGTTTGCTAATATTTTGGAGAGAACCTT

Brassica carinata (v1.0)

ID:

ChrB02_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

85

Start:

34830426

End:

34830510

Strand:

+

>ChrB02_LINE-L1-Tx1_10

ACTAAAGAAGAGATAAAGGATGTTCTCTTCTCCATGCCAACAAATAAATCTCCTGGGCCAGATGGTTTCAATGCATAGTTTTATA

Brassica carinata (v1.0)

ID:

ChrB02_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

106

Start:

56546796

End:

56546901

Strand:

-

>ChrB02_LINE-L1-Tx1_11

AGCAATTACCATCATTCGTTTTGCAGAAAAAACATAGTATCATCTGCAAAAAGAAGATGGTTGATGAAAATACTTTGTCTAGCCACTTGGAGACCCTTGAGATTAC

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

8008295

End:

8008377

Strand:

-

>ChrB03_LINE-L1-Tx1_12

AGTATACTCTTTAACCTATTAGCCAAAATCTTCGAAATCAGCTTATATAATACATTACAACAGGATATAGGTCTGTAATCTTT

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

102

Start:

16962789

End:

16962890

Strand:

+

>ChrB03_LINE-L1-Tx1_13

TGCCAAAGAAAACTGATTCACTGGAGATGAAAGATTTTCGGCCTATAGCTTGTTGCAATGTGCTCTACAAGGTGGTTTCAAAAATCTTAGCAAACAGGCTAA

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

94

Start:

19921421

End:

19921514

Strand:

+

>ChrB03_LINE-L1-Tx1_14

AGCTATTTTAAAGCTGAATCCGAATAAAGCTCCGGGTCCAAACGGTCTTAACTCAGGATAATTCAAATCTGCTTGGTCAATTGTTGGAGAAGAT

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

128

Start:

35195624

End:

35195751

Strand:

-

>ChrB03_LINE-L1-Tx1_15

CCTTTTTAATATTCGCTACCAATGCTTCCGTACACATAATAAACAAGTAAGGAGATAAGGGATCCCCTTGACGTAGGCCTCTCTGTGAAATTATGTGACCCTTTGGTTGACCATTCAATAAAACTTTG

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

35195947

End:

35196056

Strand:

-

>ChrB03_LINE-L1-Tx1_16

ATATTATTAGAGATTAATCTTCTTGGCATAAAGGCCGATTGTGTTTCCGAAATAAGTGAGGGAAAACAGACCTTTAATCTTTGGCATAATACCTTAGAAATAATCTTGTA

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

141

Start:

52646727

End:

52646867

Strand:

-

>ChrB03_LINE-L1-Tx1_17

AATACCTCATGAGCAATGATAATATTATCTGTTATCATGCGTCCTGGAATAAAAGCCGCTTGATTTTCACTGATCATACCATTGAGATGTGTCTTCAGTCGGTTCACCAGGACTTTAGAGATTATTTTATAAGCCACATTA

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

90

Start:

53482572

End:

53482661

Strand:

+

>ChrB03_LINE-L1-Tx1_18

TGAAGGACTACAGACCAATATCTTGTTGCAACGTCATTTATAAGGTGATATCTAAACTATTAGCCAACAGACTTAAGAAGATCCTGCCGA

Brassica carinata (v1.0)

ID:

ChrB03_LINE-L1-Tx1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

90

Start:

54414649

End:

54414738

Strand:

+

>ChrB03_LINE-L1-Tx1_19

CCTTAATCCTAATAAGGCTCCAGGACCTGATGGCCTTACCTCGGGATTTTATAAAGCTACTTGGCATATTCTAGGTACAGAATTCTTGGC

Brassica carinata (v1.0)

ID:

ChrB04_LINE-L1-Tx1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

109

Start:

5608857

End:

5608965

Strand:

+

>ChrB04_LINE-L1-Tx1_20

TAATTTTGACCCATTAGCTTGTGTAACGTCAGTTACAAGATAATCTCAAAGGTCTTATGCAAGAGATTAAAGAAAGTTCTACCTGATAGAATTTCAGAAACTCAGTCAG