ID Class Order Superfamily Length Start End Strand View
Chr1_SINE_1 RetrotransposonsSINESINE111847589847699+
Chr1_SINE_2 RetrotransposonsSINESINE4241391121113911634+
Chr1_SINE_3 RetrotransposonsSINESINE3472492300724923353-
Chr2_SINE_4 RetrotransposonsSINESINE19121797892179979+
Chr2_SINE_5 RetrotransposonsSINESINE69643051154305810-
Chr2_SINE_6 RetrotransposonsSINESINE16994046379404805-
Chr2_SINE_7 RetrotransposonsSINESINE11698076749807789+
Chr2_SINE_8 RetrotransposonsSINESINE1451729092317291067-
Chr3_SINE_9 RetrotransposonsSINESINE9571940817194175+
Chr3_SINE_10 RetrotransposonsSINESINE22282398988240119+
Chr3_SINE_11 RetrotransposonsSINESINE1341204382012043953-
Chr4_SINE_12 RetrotransposonsSINESINE61125061982506808+
Chr5_SINE_13 RetrotransposonsSINESINE2951000297910003273+
Chr5_SINE_14 RetrotransposonsSINESINE5521796330217963853-
Chr5_SINE_15 RetrotransposonsSINESINE1972118927821189474-

< 1 > Total 1


Arabidopsis thaliana (TAIR 10)

ID:

Chr1_SINE_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

111

Start:

847589  

End:

847699

Strand:

+

>Chr1_SINE_1

TTCTCTTTTTCCGGTGACCGGATTTTTCCTGTTTTGTAACTGTGGACGATTGTAATTCCGGGCCTAAGCCCAATTGGGACTGGACCTTTTTTTTTAAAAAAAAAAAAAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr1_SINE_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

424

Start:

13911211  

End:

13911634

Strand:

+

>Chr1_SINE_2

TTTCTCGCGACTCAGCCATGCATCTGGTTGTTGCGGCTACTGCAGAAGTCGAGGGAAGAAAGATGGGTTATGTTGTTCAATTGGTTGTTAGTTGTAGATCATGTGGATCTTAGATAGTGGTCGTGGAGGACGGGTTTAGAGGAATTGATTGAACCATCAACTTCAGGATTCGCCACAATTTATCTCCATTAGTCCGGATTGAAGGGTTCTTGCTCGCTGGGGTTAGAAATGCTCATGTCTAGAAGAGAGGGGATAGATCTGGTTTGTCAGGTTGTGCTGATGTATTTGAGGGTTAAGCATTTTGGGAGATTTATAGCGGTCAGGTGGCTCGCTGAAAAGGGTAGATGGTGGAAACCGATTTCTTCCCTCGATATTTTCAACTTATCTTTATTAATTTAAAGCCATGGATCTTGAATCCGCCAGA

Arabidopsis thaliana (TAIR 10)

ID:

Chr1_SINE_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

347

Start:

24923007  

End:

24923353

Strand:

-

>Chr1_SINE_3

TTTTCTTTTTAATTTAAATATTATTAAATTCTAAAAACCAAATTTACTTATTAGTAAAAAATTAACCGGATTAGAAAAAAAAAGACCCATATTCAAAAATACAAAACAAAACAAGATCTACAGTACACCAGAAAACACGATCTTCGTCTTCTAGATCCAATGCTAATATGATTCCTCTGCACACAAGACCTCGATATTAAGATTTTTCCCGGAGATATTAAATTCCATTGCAACCTAGCACCGAAAAACGAACTGAACCCAAAACTTTCTTTTTGGAAAAAAAAAATTCACAACCAAGACCCATGACCTCTTCTACTTGACCTAAAAAGAAGAGAGATATCAAACCT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_SINE_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

191

Start:

2179789  

End:

2179979

Strand:

+

>Chr2_SINE_4

GCCGTAAAGCTGTGACTCTTGAATCTGCCGGATATAAGGCTTCGGTCACTCTGCTTCCGACTAGTAGCAAGGTTCGAGTCTTTATGTTTGTTGGTGACTTTTTCTATTTAACCTATTTTGTAACTGGATTTTATCTGTGTATTGGGCGTTAGCACAAGTCCGAATAAGTTGTTTTTAACAAAAAAAAAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_SINE_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

696

Start:

4305115  

End:

4305810

Strand:

-

>Chr2_SINE_5

AAGACCGATTCGAGGTAGCAACCAGAGATCGGGATTCTCCGATGAAAGAGACCGGTTTTCTTCGTCAAATCCACCCCTCTGAAGCACCAACACACCACAAATCTCCCGGAAAGTTAGTCGCTCAAATTAGGCACATCGACGTAATCGGATCCTGAAAAACTAACCCAACCCACTGGGCAGTAACCCCTCTCTCCCAACCGAGAACAGCCAAAAAATTCTTAAGCTATCACGATTCAATCTGACTCGATGGATGCAAAATTGTAGTGGATCTAGAAGCTGGTGACTCAAATCCAAAACCTCTAAACGCGAAATCCACAACAGCCCTCTAAGATCCAAAGCATCTGCAGCTAACCACCGTGCGAACAACGAACCCTCCTTTATCCCCCCAACTTCCGCCGTGGGCGGAGCTCAAGACTAAGGGATGAGCCGGAGCAACTGAAGCAACCCACAACGTCAATAACCGTGTGACAAACGCTGTAGAACTCCCTTCCAACAGACCCGAGCCACATCCACATCGAGGGGAAAACACCACACCACCGTTGACAGAGAATAGATTCAGCCCACTCCTGGACTTTCATTGAGTAGATTTGACCAACGATTGAAGAACAAAGAAAAAACAGCGGACTAGATCTAAGAAACGAAACTCTTCCGCAAAAGAGAGAGTTTCACGGAAATCGATGCAACGATTGTGCTTTT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_SINE_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

169

Start:

9404637  

End:

9404805

Strand:

-

>Chr2_SINE_6

TCTTTTTTTTTTTTTTTAGATATTCATTTCCAAACGGTCTATTGACAGATGGGCTAAGAATTTCACGGGTTACAAAAAAGTGGTCCAAATCGGAACATAATAGAAACAAGATCAGTAAAACGACGGTTCACCGGCCGGAGACGCAGCCTTCACCTTCTATATCCGATGC

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_SINE_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

116

Start:

9807674  

End:

9807789

Strand:

+

>Chr2_SINE_7

TCTTGCGGCTCGACGGTTGGTGTAAAAGGCTTCTATCTGCGGCGGAAGTTGACTTGGGGTCACTATATACTTGCAAAGAGATTAGCGGCGGATCCGATGGATCCTAGATGGCTAGT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_SINE_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

145

Start:

17290923  

End:

17291067

Strand:

-

>Chr2_SINE_8

TTTTTTTTTTTTTTTTTTTTTTTTAGTATTATAAATTAAAATCCCAATGGGCTGGGCCTTGGGCCATACAAACTTGGAAACAGATACAAAAAGGAGATCGGAAAATGTCACCGGAAATTAGAACGGAAGCTCGGAACTTGTTGAT

Arabidopsis thaliana (TAIR 10)

ID:

Chr3_SINE_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

95

Start:

7194081  

End:

7194175

Strand:

+

>Chr3_SINE_9

TTTCGTTTTGGGTCTCTTTTATTTTGTACCTTGTAATTCTCTTGGCCCTTTAGCCAACTAAGCACATTTTGGGATTGAATATATATTTAAAAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr3_SINE_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

222

Start:

8239898  

End:

8240119

Strand:

+

>Chr3_SINE_10

CGATCCACCGTGGTTGCCGTGAAGTTGGGGATTTCGGGTTCACCGGATCTAAGACTCCGGCCACCGTGCAATCGTCCATCAGAAGGGTCCGATCCTTCAATTCCGTCGATAGTTTTCTTTTTTCTATTGGGCTTTTGTAACTGGATCAGATACTTGTAATCTTCAACCCAAGCCCATTTGGAATGTTATCAATGATTTAAAAAAAAAAAAAAAAAAAAAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr3_SINE_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

134

Start:

12043820  

End:

12043953

Strand:

-

>Chr3_SINE_11

AGGACTGTTCCTTTGCAGACAAGATATTGACAACAAACCTTTGATTGGAGCTAGCAAATCCTGCTGCAAACCAATCCGAGAAACAAGTCAAACCCAAAACATTCTTTTCGGGAAAGAGAGCACCGCCACAACCG

Arabidopsis thaliana (TAIR 10)

ID:

Chr4_SINE_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

611

Start:

2506198  

End:

2506808

Strand:

+

>Chr4_SINE_12

CGGCGGCTTGCGGCGACTTGCGGCGGCTTGCGGCGGAAGTTGCTATGCGGCTCGGTGGGTTTCGTCGCGCGACTTGGTGGTTAACGGCGGATCTGTTCGGATCTGCTATGGCTAATCGTGACTCAAGGCTAATTAGGGTTGTCGGAGCCACCGTCCCTGTTAGTCTCGCGATTTGGTTTCCACTAGTCCGGATCGATCTTGACTGGTCTCGGGAAGGGTGCGTTGTTCATCGGACGACGGAAGGGGGTTACATCTTGCATTCATCGATTTGCTAGGTAGGGGAATCGGTGGAGGGCCGCGGTTAGTCGGAGTTTTGACTTATTCCGGGAGGTTTGTTGCAGGTATGGCTCGTCATTGGAAGCGGATCGGCGACGGGAACTGAGTACTCCTGTCAAAGGTTGTTTCCGGCGATGTAGCTGCAACGCAGTGGACCTTGTACTCACCGGATCTAGTAGGTGGGAGATTTTGCTTTCCGGTCGGTCACTCATTTCAGATCTCGGCCATCACCGGTGTTTCCGATTCACTTTTCCGTTTTGTATCCATGAATCTTTGTATGTTCGTGGGCCGAAACCCATTTGGGAAATTAATGAAAAAAAAAAAAAAAAAAAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr5_SINE_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

295

Start:

10002979  

End:

10003273

Strand:

+

>Chr5_SINE_13

CTTTTTTTCTCTCTCTCGGGCAACTTTCTAAATCTAGTTTTTTTTTCTTCTTTTTTTTTATTTCTTTTTAATCTTCACTTGAGGTTTACGACTTCAACGGTGAATCAAGGGGGAGCAAGCTTCCTTCTCCAACAACGGTGATGTGTGTTATTCGTCATGTGACGCATCTATGGCTCTTTCATGGCGGTTTGAGAAGCTATGATATCGTTCGCTCTGATTCGAGGACGGAGGTTTCATAGACGAGTGTCTCACGGCTCATCCGCCCTATTGGCCGCTGCGACTAGCGGTGGAAGTT

Arabidopsis thaliana (TAIR 10)

ID:

Chr5_SINE_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

552

Start:

17963302  

End:

17963853

Strand:

-

>Chr5_SINE_14

TTTTTTTTTTTTTTTTCTTAAGATTATAATATAATTCTTCTCAAATGGGCTTGGGCCAAAGCCTACAACAAAAAACAGTCCAGTTACAAAAGTGGTTAATCGACAACATTGCCGGAAAAAAAGAAAAGCTCTCTGCTCGTTGATAGATGCCAGCAGAGGACCGGAGCCTTAAATCCGGCGGGCTCAAGAGCTACCGTTTCGTGGTCACCAACGAAGATCGGGAATCTCCAACGAAAGAGACCGGTTTTCATCATCAAAACCATCCCTCCGATGCACCAACCCACAACAGATCTCCCGGAAAGCTAGTTGCTCCGACTAGGCACATCGACGAAATCGGATCCTGAAAAAGCAACCCAATCCACTGGGCGGTAACCCTTCTCTTCCAAACCGAAAGTAGCCAAAAAACCTGAGTTTCGACGATTCAATCCGGCTCGATGGATGCTAAATTGAGGCAGATCTAAAGGATGGTGGCTCAAATCCATTGCCTTTAAACCCGAACTCCTCAACCGCCCTCTAAGACCCTATGGATCTGCAGCTAACCACCGTGCAAAC

Arabidopsis thaliana (TAIR 10)

ID:

Chr5_SINE_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

197

Start:

21189278  

End:

21189474

Strand:

-

>Chr5_SINE_15

TCTTTTTTTTTCTTAAACTATATTAAAAATTCAATTCAATTGGACTTGGGCGAAGACTACAGCAAAGAACTAAAAGTCTAGTTACAAAATTGGTGAATCGGCATTTAACCGGAAAAGAAAAGAAGCTCGCCGCTTGTTAATAGATGCCAACAGACCGACCGGAGCCTTAAATCCGGCGGGTTCGAGACCCACCGCTT