ID:

Chr1_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

252

Start:

150340  

End:

150591

Strand:

-

>Chr1_LTR-Copia_1

TTGAGGCCCAATAGAAAATTTTCACAAAGTTTCCCTCAAATAGATCCATCAATTTTTCTAACTAACACACAGCAACAGTGAGTGCACCCATACGACGGATAATCTTGTGCACGCTTAAAATTTTCCCAAATTGTGATCAACTTCGTATAGAAAGTATTGACAACCCTGTTTATGATACCATACAATCTCTGCTCAATCTGATACAACTTTGAAACAGTATTATTCTCTGCTTTAATCGTTTCAACAATCTTT

ID:

Chr1_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

83

Start:

1622266  

End:

1622348

Strand:

-

>Chr1_LTR-Copia_2

CTCCTTTACATATGATTCATCGTCACTCGAGGAGGAAGAGGAAGATGAAGACGACGATGATGACGATGATGATGATGAAGATG

ID:

Chr1_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

233

Start:

1899510  

End:

1899742

Strand:

-

>Chr1_LTR-Copia_3

CTTGGACGATGCTTCACAGTGATATTCCAAAAGTTTACCCCTGTCACCAACAAAGCCAAATAAGGGCTTGTACCGATTGAAGAGTATATGATACTTCCCACTACACTTGAGTAAAGAACTGTCTTCATGTAATCATTATAACCATCTTGTTATGCTTACTATCTTCTTCAAATCGCAGCTTTCAATCTAAAATGAACTCCTAAGTGACATACGACTAATTTTGCTTCATCCAT

ID:

Chr1_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

137

Start:

1938073  

End:

1938209

Strand:

+

>Chr1_LTR-Copia_4

AGACCATTATTATTGATAGTTTTTTAGGTTAGTTTTTAGATAAAGTAGGTCTTAAATTTAATGTTATAATTCAATTAATTGTTAAGAATGGCTCTTATATAAGAGCCAAATCTAATGTTTCTTAGGTTAATTCTTAG

ID:

Chr1_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

551

Start:

2157110  

End:

2157660

Strand:

+

>Chr1_LTR-Copia_5

TGTTAGTGCACCCCTCTATCAGGACAAACCAGAAGGAGTGCTGATTGCTGGAACAAGCTGGAAGCTGTTTCAGAAGACTAAAGTGAAGATCAAGTAATTGATGCTGACGTGGATATGCCGCCAAATGAACGAATGACGTGGAGATCACAACAGGATGAGTTCAGTTTGGAGAGGAGATATTCATGCGAAGATTTGGAGTGATCCAAGATCTCGAACGCTAACCTAGAAGACCAAAGACCTCGATAGTATAAATAGAGGTGCTAAGGTTCTTGTTAGACGGGGCCGTGATTGTGAGTGAAAAGCTAGTGCAACGCTTTTCATTATTAGAGACTAAGGTTTAGTCTGATTGGAATTCTAGAGAGATCAAAGAGTGTGTTCTTGTGATCTGCTCTTGTGTGTTTAAGGAAATCTCAGGTGACAAGCTAAAGTAGTTTAGATCTTGTGTAAAACCAATTAAGGTAGTTGTAAACTTCTTAATCAGATTTCTAATAAAGTGATACTCAGTGGTTCTGAGTTTGGGGAATACGATTCTTGGTTCATCCGGAATTTCA

ID:

Chr1_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

98

Start:

2929975  

End:

2930072

Strand:

-

>Chr1_LTR-Copia_6

AGACTTCTTCGTTGGGATCACCGTGTTCCTCGGAATAATGTTTGTCATCACGCCTCCGACAGTTTCAATACCGAGACTCAAAGGCGCAACATCAAGCA

ID:

Chr1_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

121

Start:

3360540  

End:

3360660

Strand:

-

>Chr1_LTR-Copia_7

TGTTAGAGTAAAATTCTTTTAGAGGTAATGGAGAAAGTGTTTAAGTGTTTTGAGAGAGTTTTTTAGGAAATAGAACTTTTATTACTTTGCTTTAAACTTGAATACAACTTCACAACCTTGC

ID:

Chr1_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

670

Start:

3360647  

End:

3361316

Strand:

-

>Chr1_LTR-Copia_8

CTTCACAACCTTGCTTTGGATGATTTATACAAGGTAGCCCTCTCACCATTTCCTTCCTTGAAAGCAACTCCAATCCTCCAAAATTTAGATGTCCGAATCGAAGATGCCATAGCCAAGACTCCTCTTTGTAACACATCTTAAGACATTGTGCAATGTCATTTCGAATGTTGAGGACAAACATTCTATTTTTCGACATTGGCACCTTGGTAATGAGATTGCTTTCTTGGTCTCTTATTGAAAGGTTATTATCTTTTAATCTAATATCATAACCTTTCTCTAAGAGTTGTCCAAGGCTCAAGATGTTTGTCTTCATGCTCGGAATATAGTAACCGTTGGAAATAAATTGATGATCTCCATTCTTCAATCGAATAAGAATGTTTCCTTTACCTTTTACCTCCATCTTCGATTCATCTCCTAAAGCCACATTTCCTCTCACCGATTCATCAAGCTCCGCGAACATACTTTTTCTCCCGCACATGTGATTACTTGCACCACTATCGAGGTACCACTTATGATTCTCTTCTTGTTCATCTTTCTTGTAGCTAGCCATTAATAACATGTCTTCTTCTTGAATTTTTTCTTCAACGTAGTTGGCCTTCTCCTCAAATGTTTTGTTGCTAGGAGCTTTACATTCAGAAGCATAATGTCCAAACTTCCCACAATTGTAGCA

ID:

Chr1_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

440

Start:

3780765  

End:

3781204

Strand:

+

>Chr1_LTR-Copia_9

TGTTGAAAGTTAAACTTGATTTTGAATCAAGTTTAATTATTGGATCAATTATCCAATAATTAATTATGGCCAAATCCAAGTTCTAGAGTTTTCTCTAGAAATATCATCATTTCCACCTCCTTAAAAGATTCTAGAAATTTTCTAGAATCATCTTCCACCTCCTTAAACATAAAAATCTAGATACTCTAATAGAATAATCTAGATAATTTGAATAATGTAATCTAGATCTTATGTAAGAACTCTCTAGACTTAGGATTAAAATATTTTAGATATTTTGTAGTTTGGAGGCTATAAATACCTCCTCCCCCTCTCAAATGTTGCAATGTTGTGAAGTTGTATTCAAGTTTAAAGCAAAGTAATAAAAGTTCTATTTCCTAAAAAACTCTCTCAAAACACTTAAACACTTTCTCCATTACCTCTAAAAGAATTTTACTCTAACA

ID:

Chr1_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4077

Start:

3781204  

End:

3785280

Strand:

+

>Chr1_LTR-Copia_10

AAAGTGGTATCAGAGCTTGAAGATCCTAAAGATGGCGAGTAATAATGTTCCCTTCCAAGTCCCGGTGCTCACAAAGAGCAACTATGATAATTGGAGTCTACGAATGAAGGCTATCCTAGGAGCACATGACGTGTGGGAGATAGTCGAGAAAGGTTTCATTGAACCGGAGAATGAAGGTAGTCTTTCTCAAACTCAAAAAGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAAGCTCTCTGTCTAATCTATCAAGGATTAGATGAAGATACGTTCGAGAAGGTCGTTGAAGCTACGTCGGCGAAAGAAGCATGGGAGAAGCTTCGAACCTCTTACAAAGGTGCCGATCAAGTCAAGAAAGTACGTCTTCAAACTCTAAGAGGAGAATTTGAAGCACTACAAATGAAGGAAGGTGAACTCGTCTCCGATTACTTCTCAAGAGTGTTGACGGTTACTAATAACCTTAAAAGAAACGGAGAGAAGCTAGATGATGTGAGAATCATGGAGAAAGTTCTTAGATCATTGGATCTAAAATTTGAGCATATTGTCACCGTCATTGAAGAAACAAAAGATTTAGAAGCTATGACAATAGAGCAACTTCTTGGGTCATTACAAGCTTATGAAGAAAAGAAGAAGAAGAAAGAAGATATCGTCGAACAAGTCCTCAATATGCAAATTACAAAAGAAGAAAACGGCCAAAGTTACCAAAGAAGAGGTGGTGGTCAAGTACGAGGACGAGGTCGTGGTGGATATGGAAATGGACGTGGTTGGAGGCCACATGAAGACAACACAAACCAAAGAGGTGAAAACTCATCAAGAGGTCGTGGGAAAGGACACCCAAAATCAAGATACGATAAATCAAGTGTCAAATGCTACAATTGTGGGAAGTTTGGACATTATGCTTCTGAATGTAAAGCTCCTAGCAACAAAAAATTTGAGGAGAAGGCCAACTACGTTGAAGAAAAAATTCAAGAAGAAGACATGTTATTAATGGCTAGCTACAAGAAAGATGAACAAAAAGAGAATCATAAGTGGTACCTCGATAGTGGTGCAAGTAATCACATGTGCGGGAGAAAAAGTATGTTCGCGGAGCTTGATGAATCGGTGAGAGGAAATGTGGCTTTAGGAGATGAATCGAAGATGGAGGTAAAAGGTAAAGGAAACATTCTCATTCGATTGAAGAATGGAGATCATCAATTTATTTCCAACGTTTACTATATTCCGAGCATGAAGACAAACATCTTGAGCCTTGGACAACTCTTAGAGAAAGGTTATGATATTAGATTAAAAGATAATAACCTTTCAATAAGAGACCAAGAAAGCAATCTCATTACCAAGGTGCCAATGTCGAAAAATAGAATGTTTGTCCTCAACATTCGAAATGACATTGCACAATGTCTTAAGATGTGTTACAAAGAGGAGTCTTGGCTATGGCATCTTCGATTCGGACATCTAAATTTTGGAGGATTGGAGTTGCTTTCAAGGAAGGAAATGGTGAGAGGGCTACCTTGTATAAATCATCCAAATCAAGTGTGTGAAGGATGTCTACTTGGAAAGCAATTCAAAATGAGCTTTCCAAAGGAGTCAAGTTCAAGAGCACAAAAACCGTTGGAGCTAATACACACCGATGTGTGTGGTCCGATCAAGCCGAAATCACTTGGTAAAAGTAATTACTTCCTTCTCTTTATTGATGATTTTTCAAGAAAAACATGGGTATATTTTTTGAAAGAAAAATCCGAGGTGTTCGAAATTTTCAAAAAGTTTAAAGCCCATGTTGAGAAGGAGAGTGGTCTTGTGATCAAAACCATGAGATCCGACCGTGGAGGAGAATTTACATCCAAGGAGTTTCTTAAGTATTGTGAAGACAACGGCATTCGAAGACAATTAACGGTGCCAAGATCCCCTCAACAAAATGGTGTAGTGGAAAGAAAGAATAGAACAATTCTTGAGATGGCAAGGAGCATGCTCAAAAGTAAGAGACTACCAAAAGAGTTGTGGGCGGAAGCGGTCGCGTGTGCGGTTTATCTATTAAATCGATCTCCAACAAAAAGTGTCTCCGGAAAAACACCACAAGAAGCTTGGAGCGGAAGAAAGCCCGGTGTTTCTCATTTAAGAGTCTTTGGAAGTATTGCTCATGCTCATGTACCGGATGAGAAGCGGAGCAAACTAGATGACAAAAGTGAGAAGTATATCTTCATTGGTTATGATAACAACTCCAAAGGCTACAAGCTCTATAATCCCGATACGAAGAAGACAATTATTAGTCGAAATATAGTGTTCGATGAAGAAGGAGAATGGGATTGGAACTCAAATGAAGAAGATTATAACTTCTTTCCACATTTTGAAGAAGATGAGCCGGAGCCAACAAGAGAGGAGCCACCAAGTGAAGAGCCTACTACACCACCAACTTCACCAACAAGTTCTCAAATAGAAGAAAGTTCGAGTGAAAGGACTCCGCGTTTTAGAAGTATACAAGAGCTCTATGAGGTAACCGAAAATCAAGAAAACCTTACCTTATTTTGTTTATTTGCGGAGTGCGAACCCATGGATTTCCAAAAAGCCATTGAAAAGAAGACTTGGAGAAATGCCATGGATGAAGAGATCAAATCAATACAAAAGAATGACACATGGGAGTTAACTTCACTTCCAAATGGACACAAGGCAATTGGCGTGAAGTGGGTGTATAAAGCAAAGAAAAACTCTAAAGGAGAAGTGGAAAGATACAAAGCAAGATTGGTTGCAAAAGGTTATAGTCAAAGAGTCGGAATTGACTATGACGAGGTATTTGCTCCCGTTGCTCGTCTAGAAACGGTTAGACTAATCATCTCACTAGCGGCTCAAAACAAGTGGAAGATACATCAAATGGATGTCAAGTCGGCCTTCTTAAATGGAGATCTTGAAGAAGAAGTTTACATTGAGCAACCACAAGGCTACATAGTCAAAGGTGAAGAAGACAAAGTCTTGAGGCTAAAAAAGGTGCTTTATGGATTAAAACAAGCCCCAAGAGCTTGGAATACTCGAATTGACAAGTATTTCAAGGAGAAAGATTTCATCAAGTGTCCATATGAGCATGCACTCTATATCAAAATTCAAAAAGAAGATATATTGATCGCATGCTTATATGTAGATGACTTGATATTCACGGGTAACAATCCAAGCATATTCGAAGAATTCAAGAAAGAGATGACGAAGGAGTTCGAGATGACGGACATTGGATTGATGTCTTACTATCTCGGAATTGAAGTAAAACAAGAAGACAATGGAATATTCATAACTCAAGAAGGCTATGCTAAGGAGGTACTTAAGAAGTTCAAGATGGATGACTCAAATCCCGTTTGTACACCAATGGAATGCGGAATCAAACTATCAAAGAAAGAAGAAGGGGAAGGAGTGGATCCAACAACCTTTAAGAGCTTGGTTGGAAGCTTGAGATACTTAACATGCACAAGGCCCGATATTTTATATGCGGTCGGAGTTGTTAGTCGTTACATGGAGCATCCAACAACAACTCATTTCAAAGCGGCAAAAAGGATTCTTCGCTATATCAAAGGTACTGTAAACTTTGGCTTACATTATTCAACTACTAGTGATTACAAGCTTGTTGGATATAGCGATAGCGATTGGGGTGGAGACGTAGATGACCGAAAGAGTACAAGTGGTTTTGTGTTTTACATTGGAGACACGGCTTTCACATGGATGTCGAAGAAACAACCAATTGTCACTCTATCCACTTGTGAAGCGGAGTATGTAGCGGCTACGTCATGTGTATGCCATGCTATTTGGTTAAGAAACCTCTTGAAGGAGTTAAGCTTACCACAAGAGGAACCAACGAAGATCTTTGTGGACAACAAGTCGGCAATAGCTTTGGCGAAGAACCCGGTCTTCCATGATCGAAGTAAACACATTGACACACGCTATCACTACATTAGAGAGTGTGTTAGCAAGAAGGACGTGCAATTGGAGTATGTGAAGACACATGATCAAGTAGCCGATTTTTTTACCAAGCCTCTCAAGCGTGAAAACTTTATCAAGATGAGGAGTTTGCTTGGAGTAGCAAAATCAAGTTTAAGAGGGGG

ID:

Chr1_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

440

Start:

3785281  

End:

3785720

Strand:

+

>Chr1_LTR-Copia_11

TGTTGAAAGTTAAACTTGATTTTGAATCAAGTTTAATTATTGGATCAATTATCCAATAATTAATTATGGCCAAATCCAAGTTCTAGAGTTTTCTCTAGAAATATCATCATTTCCACCTCCTTAAAAGATTCTAGAAATTTTCTAGAATCATCTTCCACCTCCTTAAACATAAAAATCTAGATACTCTAATAGAATAATCTAGATAATTTGAATAATGTAATCTAGATCTTATGTAAGAACTCTCTAGACTTAGGATTAAAATATTTTAGATATTTTGTAGTTTGGAGGCTATAAATACCTCCTCCCCCTCTCAAATGTTGCAATGTTGTGAAGTTGTATTCAAGTTTAAAGCAAAGTAATAAAAGTTCTATTTCCTAAAAAACTCTCTCAAAACACTTAAACACTTTCTCCATTACCTCTAAAAGAATTTTACTCTAACA

ID:

Chr1_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

91

Start:

3790753  

End:

3790843

Strand:

+

>Chr1_LTR-Copia_12

CAGGTCATCAATTACAGCTGCACAACAGATTTGATTCGCTTTGTTCCCCTGTCGTGATGTGTGTTTAACCTAGGTCTCTCTCTTTAGGGTT

ID:

Chr1_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

302

Start:

3894686  

End:

3894987

Strand:

+

>Chr1_LTR-Copia_13

TTCCATGATTTTCTACAAAGATGGTAAGAAAGTGATATCAGGGAAATATCACGAAGGGATTTACTATCTTGAAGGCACGGTTGTTAAGGCTGAAAAGAGTGTACCACATGCTGAAAATGGTGGAAAAAGTGTTGTCAAGGCTGTAGTTGGAGTGAGGAAGAAGAAGTCAAGGAAGGTGACTTTCAACGTGAATTTAATTTAAGGACCTACTCCATATGGCTTTGGAACAAAGGAATCATCAGTTCAAGGTGGAGATGAATCCTCAACAGAAGAATCAGATTGTTTAGAGGAGGTTAAATCTG

ID:

Chr1_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

92

Start:

3895125  

End:

3895216

Strand:

+

>Chr1_LTR-Copia_14

TTGAAATGAAAGAGTTGGAAAAAGCTTCAAGGATTCAGGGAATGGAGGTTAACAGAGATAAAGCTAAGGGAGTTCTAGCTCTGTTACAAGAA

ID:

Chr1_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

274

Start:

3895399  

End:

3895672

Strand:

+

>Chr1_LTR-Copia_15

AGATACTAAAAACAATTGAACCAACAGATGTTATGACTCAAGCAATAGATGGAGAGGACTTTCATGCTTGCTACGATCTCCTCAACATCGTAAGGAGGACGACACAGCTCCAGGTAACTCCACTATCGATATTGTACGCTGGAAGGAAGAACAGCAGAGAAACAAGTCAACTTTGGGAAAAATTGTTATGTCGATAGGAAGACTTCATAAGGGTTAATGGAGTTACCTGTAGGCGCCTGGAAATACGGTGAGGAGACTTATATTCCAGGTGGAG

ID:

Chr1_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

146

Start:

3895689  

End:

3895834

Strand:

+

>Chr1_LTR-Copia_16

CATGTGGAGTTTCTGTGATGAAGATTCAAGAAATCCGAGTTAGGATTTCAGCGGCTCAAAGGGGAAAAAGAATCAGCAGCAAGAGAGGAGATGATTCATGGTTAAGAGAGTACCTGAAGTCATCAAGGAGAAAAAGAACACCAGTT

ID:

Chr1_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

174

Start:

3896239  

End:

3896412

Strand:

+

>Chr1_LTR-Copia_17

AGATGGAGCTCGTCGGAAGAAACCTACCGTGGTAACAAAATTGAAATTTGTCAACTTTCAAAAATTTTGAATTCTCAGAAGATCTTAATCTCTAAGTGTGAAGAAGAGACAAGAGAGAGATTAGATTTACCTGAGATTTGCAGAGGAATCAATGGTCGGATTCGCGGGAAAAGA

ID:

Chr1_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

227

Start:

3896445  

End:

3896671

Strand:

+

>Chr1_LTR-Copia_18

TTTGAAGTGTCTCAAAATTTCAGAAGAGATACTCTCTAATCATCACAACAACGAGAAAATGAGAGATTGGAGAGTACCATGAGTTGTGCGGTGATGGTGGCGGTCCGATTCGGCGGAGTTAAACGCAGCCGGAGTTAATTGATGGTGAAGATGATTGTGATGTTGTGATGTGTCACGGACGAGAGGCCTGGATGAGAGACGAAGAGAAGTCTCTTGTTTCACCAGAA

ID:

Chr1_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

110

Start:

3896855  

End:

3896964

Strand:

+

>Chr1_LTR-Copia_19

TCGTCGAAGGAGGTTGGAATCCGGCAGTGGTGTTGATTTCACGAGATGACGTTGGTTGTCGGAGATGTCGATGTCGTCGTGGAAGTGTGTTGTTGCCAAAAGGTGGAGAT

ID:

Chr1_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

129

Start:

3896965  

End:

3897093

Strand:

+

>Chr1_LTR-Copia_20

TGTTATTGAGTTTGACCAAAACACAACATTGGGCTTTTATTGGGCCAAACGGAGTTGACATAAAGAGAAGAAGAGCAAAAGTAACCCATCACATATATATATATATATATATATCTACGTGGGATATGA