ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro17721791642179340-
scaffold_1_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro18173155397315719-
scaffold_1_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro2791154189611542174+
scaffold_1_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro1242403092824031051-
scaffold_1_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro2022575228325752484-
scaffold_1_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro2042908434829084551-
scaffold_170_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro10475307633+
scaffold_2_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro9093191289319217-
scaffold_2_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro10494825899482692+
scaffold_2_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro1831537485815375040+
scaffold_2_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro1221674268416742805+
scaffold_2_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro1021695787016957971-
scaffold_3_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro19780866668086862-
scaffold_3_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro1091524223315242341+
scaffold_3_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro901953267719532766-
scaffold_4_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro961426638414266479+
scaffold_4_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro1511485278014852930+
scaffold_433_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro8318561938-
scaffold_5_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro11593858339385947-
scaffold_5_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro831260879212608874-

< 1 2 > Total 2


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

177

Start:

2179164  

End:

2179340

Strand:

-

>scaffold_1_LTR-Ngaro_1

CCGCTTTGTTGTTCCTGTTGTTGAAGCCGCTGCTGCTGCTGAAACTGATACAGTTGCTGCTGCTGAAACTGAAATTGCTGCTGCTGCTGTTGTTGCTGGTGGTGTTGTTGTTGCTGCTGCTGTTGTTGTTGCTGCTGCTGTTTCTGTGACTGGATCTGGAGCTGCTGGAACTGTTGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

181

Start:

7315539  

End:

7315719

Strand:

-

>scaffold_1_LTR-Ngaro_2

GCTGTTGTTGATTAATCTGCATTTGCTGTTGTTGTTGCTGCTGCATCTGCTGTTGTGGTTGCTGCTGTATTTGTTGCTGCATCTGTTGTAGTTGTTGTTGGGAATGGGAATGGTTCATCTGCGACTGGCCTAATTGTGATTGTTGCTGCTGCTGTTGTATTATCTGTGATAACTGCTGCTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

279

Start:

11541896  

End:

11542174

Strand:

+

>scaffold_1_LTR-Ngaro_3

CAACAGCAGCAGCAACAACAGCTCCAACAGCAGCACCAGCAACAACAGCAGATCCAGCAGCAGCAGCAACAACAACAACACCTCCAACAGCAACAGATGCCACAACTCCAGCAGCAACAACAACAGCAACACCAGCAGCAACAGATGCCACAACTCCAGCAGCAGCAGCAGCATCAGTTGTCACAGCTCCAACATCATCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCATCAATTGACACAGCTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

124

Start:

24030928  

End:

24031051

Strand:

-

>scaffold_1_LTR-Ngaro_4

GTTGTTGAGCAGTAGGAATAGTAGCAGTAGTAGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGCAGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

202

Start:

25752283  

End:

25752484

Strand:

-

>scaffold_1_LTR-Ngaro_5

CTGTTGTTGTTGCATCATAGCCATAGCAGCTGCAGGGTATTGCTGCATCGCAGCCATCCATTGTTGTTGTTGTTGCCACTGTTGTTGTTGTTGTTGCTGTTGCTGAGGTGGTGGTGTTGATTGCTGCAACGGTGGTGGTGGTGTTGTTCCGGCTGATGTTGGTGGTAACACTGAATCTGTTGAACCGTTGTTGTTTGGTGTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

204

Start:

29084348  

End:

29084551

Strand:

-

>scaffold_1_LTR-Ngaro_6

GGAGGAGATTGTAACAACCGTTGTTGTTGTTGGAATTGCTGTTGTTGAATGAAGTGTTGCTGTTGTTGGAATTGCTGAAATTGTTGCATCTCTTGTTGTTGTGGCTGGAATTGTTGTTGTTGCTGCTGCGTCTGTTGTTGTTGAAGATGAAACTGTTGTTGCTGGAGGAATAGTTGCTGGTCATGATTGGTCGGTGTACCGAAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_170_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

7530  

End:

7633

Strand:

+

>scaffold_170_LTR-Ngaro_7

ACTGCTGCCACGACTGCTGCCACTGCTGCTGCCACTGCTGCTGCCACGACTGCTGCCACTGCTGCTGCCACGACTGCTGCTACTACTGCTACTATTCCTACTGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

9319128  

End:

9319217

Strand:

-

>scaffold_2_LTR-Ngaro_8

GCAGTAGGAATAGCAGCAGTAGTAGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGTAGTGGTATCAGTGGCAACAGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

104

Start:

9482589  

End:

9482692

Strand:

+

>scaffold_2_LTR-Ngaro_9

ACTGCTGCCACGACTGCTGCCACTGCTGCTGCCACTGCTGCTGCCACGACTGCTGCCACTGCTGCTGCCACGACTGCTGCTACTACTGCTACTATTCCTACTGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

183

Start:

15374858  

End:

15375040

Strand:

+

>scaffold_2_LTR-Ngaro_10

CAACAGCAGCAGCAGCAACAACAACTCCAGCAGCAACCCCAACAACAACAGTTGCAGCATCAGCAACAGTTACAGCAGCCTATGTCTCAGCCATCTCAGCAGCTAGCTCAGTCTCCGCAGCAGCAGCAGCAGCAGCAGCTACAACATGAACAGCCTCAACAAACACAGCAGCAGGCAACAGCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

122

Start:

16742684  

End:

16742805

Strand:

+

>scaffold_2_LTR-Ngaro_11

ATCTGCTGCCACTGATACTACTACTGCTGCCACGACTGCTGCCACTGCTGCTGCCACGACTGCTGCCACTGCTGCTGCCACGACTGCTGCTACTACTGCTACTATTCCTACTGCTCAACAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

102

Start:

16957870  

End:

16957971

Strand:

-

>scaffold_2_LTR-Ngaro_12

ATGTTTTAGAAAAAAATAAAACAGAACAAAAAGCTCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

197

Start:

8086666  

End:

8086862

Strand:

-

>scaffold_3_LTR-Ngaro_13

GTTGTTGCTTCCTCCGCCATTGTTTTGGTTGTTGTTGTCATTGTTGTTATTACCATTGTTGTTCTGGCCATTTGTTGTTGTTGTCTTTGTTATTCCCATTGTTGTTGTTGTCATTGTTGTTGTTATTACCATTGTTGCTATTACCATTGTTGTTGTCATTGTTGTTATTACCATTGTTGCCATCATTGTTGTTGTTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

15242233  

End:

15242341

Strand:

+

>scaffold_3_LTR-Ngaro_14

GCTGCCACGACTGCTGCCACTGCTGCTGCCACTGCTGCTGCCACGACTGCTGCCACTGCTGCTGCCACGACTGCTGCTACTACTGCTACTATTCCTACTGCTCAACAAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

90

Start:

19532677  

End:

19532766

Strand:

-

>scaffold_3_LTR-Ngaro_15

GCAGTAGGAATAGCAGCAGTAGTAGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGTAGTGGTATCAGTGGCAGCAGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

96

Start:

14266384  

End:

14266479

Strand:

+

>scaffold_4_LTR-Ngaro_16

ACAACAACAACAGCAACAACAGCAGCAGCAACAGCCGTTTCATGAACGGTTACAAGCTCACCATCTTCATCAGCAGCAGCAGCTGCAGAAACATCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_4_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

151

Start:

14852780  

End:

14852930

Strand:

+

>scaffold_4_LTR-Ngaro_17

AGCTGCAAAACAGTTCCAGCAACTTCAGATTCATTCACAGAAGCAGCAACAACAACAGCAACAACAACACCAGCAACAGCAGCAGTATCAGTTTCAACAGCAACAGATGCAACAGCTTATGCAGCAGCGGATTCAACAGCAGGAACAACAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_433_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

1856  

End:

1938

Strand:

-

>scaffold_433_LTR-Ngaro_18

GTGACTGCTGTTGTAGCATTGACTGCTGTTGTAGCATTGACTGCTGTTGTGACTGCTGTTGTAGCATTGACTGTTGTTGTAGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

115

Start:

9385833  

End:

9385947

Strand:

-

>scaffold_5_LTR-Ngaro_19

GTTGTTGAGCAGTAGGAATAGTAGCAGTAGTAGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGCAGTCGTGGCAGCAGCAGTGGCAGCAGTCGTGGCAGCAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_5_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

12608792  

End:

12608874

Strand:

-

>scaffold_5_LTR-Ngaro_20

GTGACTGCTGTTGTAGCATTGACTGCTGTTATAGCATTAACTTCTGTTGTGACTGCTGTTGTAGCATTGACTGTTGTTGTAGC