ID:

scaffold_1_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

283

Start:

199211  

End:

199493

Strand:

+

>scaffold_1_LTR-Copia_1

TGTTGGTTAAGCTTGAAGATTACTTGAACCGGAAGCAACTAAACCGAGTTATGGTTTAGAGAAGATAAAGTCAAATATATTAGGAGTTATCTAATATATGTGTAATCCTAGAGAGATTAGGATTTGAGAGACTTGTATAAATAGAGAGGTTGAGTCATGACCTAATTTGTGAGAGAGTTTAAGTTTTGAGAGATTTTCTTAAACTAATAAAGGCTATTGAGTTTGTGAGTTAAACACTTTCTTTTGTTAATCGTA

ID:

scaffold_1_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4174

Start:

199494  

End:

203667

Strand:

+

>scaffold_1_LTR-Copia_2

ATATTTGGTATCAGAGCTCTTTGCGATCATGGGAGAGATCACGGAAAGAGCACAAGCGGAGGTGGCCAAGATAAGTGAAGGAGGAGGCTCGTCGACGATAAAGTGCCCCATGCTTAACATGACCAACTACACCGTTTGGGCAATGAGAATGAAACTTCTACTCAGGGTACACAAGGTCTGGGAAGTGATTGAAACACCATCAAACGATGAAGAGAAAAACGTGATGGCCATGGCTTTAATGTTTCAATCTATTCC

ID:

scaffold_1_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

283

Start:

203668  

End:

203950

Strand:

+

>scaffold_1_LTR-Copia_3

TGTTGGTTAAGCTTGAAGATTACTTGAACCGGAAGCAACTAAACCGAGTTATGGTTTAGAGAAGATAAAGTCAAATATATTAGGAGTTATCTAATATATGTGTAATCCTAGAGAGATTAGGATTTGAGAGACTTGTATAAATAGAGAGGTTGAGTCATGACCTAATTTGTGAGAGAGTTTAAGTTTTGAGAGATTTTCTTAAAGTAATAAAGGCTATTGAGTTTGTGAGTTAAACACTTTCTTTTGTTAATCGTA

ID:

scaffold_1_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

570

Start:

773979  

End:

774548

Strand:

+

>scaffold_1_LTR-Copia_4

TGAAAGTGCAGATATTGCTGGAACAAGAAACGGTCTGTTGGAACAAGTTTGGGATTGCTCGGTTGGTGCTGACGTGGTTCGTGGAGTTGAAGATAAATATCAGAAAGATATTTAGAGAGATCAAATCAGAAAAAACGTGCAGCTGAAGATATTCTTGGAGAAGAATATTATTGAAGATTTGTTTCTTTTATTTAGAAGAGGATATTTTCCTTTTGTATCGGGATAAAATCTAGGGTGACATATCTCATAGGTATA

ID:

scaffold_1_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

319

Start:

775430  

End:

775748

Strand:

+

>scaffold_1_LTR-Copia_5

TGTTATAAAAGTCGTGAAAAGGAGGAATCGTAAAGTCGCAAAAGATGCGCACATGGGTTAAACGTTTCGTTATTTATTAATTTATGTGGAGCCCACCGTCACTATGCACGCATAGTAATTTACTTTTTTACGCCTATATAAACGAACGAATTCGTTCGATGTAAAATCACAATTCATACTTCAACAATAAGAAGTTATAAGAAATCTCTCTCCTCCTCTCATCTCTTTATTTTCAGTATCCCGATCCTTCTGCGG

ID:

scaffold_1_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

128

Start:

949130  

End:

949257

Strand:

-

>scaffold_1_LTR-Copia_6

AATTTTTAAAATATTCGAATGGATCTTAAACTTTTTTTTTTTTACGTCTAGATTTATTATTTATTGCAAATTATGAGAACTGTTACATAGACGATTCTACAACGGACAATTCCTTCCGACCCTTATTA

ID:

scaffold_1_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

1034908  

End:

1034997

Strand:

+

>scaffold_1_LTR-Copia_7

TAGTGGATTTTCCGGGGTAAAAGTCCCCGGCGAGATGTAGGGTTTCCACATTGGAGACCTGAACTCGTTAAATTCTCTGTGTCATTTATT

ID:

scaffold_1_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

87

Start:

1057524  

End:

1057610

Strand:

+

>scaffold_1_LTR-Copia_8

TTCTGTTGTTGTACCAAAACCAGATCCCCCAATGTAAGGCTTTAGCAACTTATTTGGTCAAATCAAAGAGCTTTCACACAAGTTTCT

ID:

scaffold_1_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

410

Start:

1095599  

End:

1096008

Strand:

-

>scaffold_1_LTR-Copia_9

CTCCCCCTTGGATGACATAACCGTGTAGATGCCAAAGGATCTCAGTAATACGCTTGGGGATGCTGCCTCATTAAAACCTTAGCAGGAAAACCCATTGGGACAAAACCATGGTTAAGGAAAAAGAGTACAGCACGTATTACTCCCCCTGTTTTGGTCATCCCTGCAAGTCCTTAAGTCTCCGCATTCCAATTTGATGCGTGAGCTTCCTCAATGTCGATGTTGGTAATGCCTTGGTAAAGAGATCGGCTGAGTTGT

ID:

scaffold_1_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

3602

Start:

1096116  

End:

1099717

Strand:

-

>scaffold_1_LTR-Copia_10

CCTGCATCAGCAAAACAAACTAAACCAAAGCAAACTAGACCTTCTTTGGTTAGATCAGTATAGAATAAAACCCAACTAACAAACATAGGAAGAATAGAATTTAAAATTTAACCAAACCTTCCTTCAAACCTTTCTAGTGCCTTTGGGTTGATCATGAACTAAATTTAGGCAAAGGAGGTTCACGGCAAAACATATGTCTGGTCTAGTGTGGCTAGCCAAGTACATTGACGCTCCTATGGCACTAAGGTATGGCAC

ID:

scaffold_1_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

507

Start:

1099769  

End:

1100275

Strand:

-

>scaffold_1_LTR-Copia_11

ATCCACGAACTTATAGTCCTGGATTATGAGACTCTCAATAAGATGGTGTCTAATATTGTCTTGTATCTATCTTTCTCTCTTGGCATTCTTGCCTTATTAGATACATTCACCAAGTCCTTTTGACTTTAGGATAATCTTAGTATCCATTGCCCATTTTAAAATAATTATCTCCTAAGAAATTTAGGGCAGTAAAGTACAAGTTGTAATTCAACATCTACAAGAAAAAGTTTTGAGTCAAAATCATGTAATCGTTAG

ID:

scaffold_1_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

827

Start:

1100434  

End:

1101260

Strand:

-

>scaffold_1_LTR-Copia_12

AGGGTTTCCTATTTTATTTAGGATTTTAAGGTTTCCTAGATTTTAGGGTTTCCTATTTTATTTAGGATTTTAGGTTTTAGGGTTTTGAGATTTCTTTTAGGATTATCTTTTCTAAGTTTTCTAGGGTTCATGCAATTTTAGTTTTAGGGTGTTAAGCATGTAATCAATCAAAGGAGCAAACAATCTAACAACCTAAACAATCTCAATCAAGCCGATTTAAACTTATGGAATTTTTTGGATTAGATTCGTTTTAGG

ID:

scaffold_1_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

410

Start:

1198133  

End:

1198542

Strand:

-

>scaffold_1_LTR-Copia_13

CTCCCCCTTGGATGACATAACCGTGTAGATGCCAAAGGATCTCAGTAATACGCTTGGGGATGCTGCCTCATTAAAACCTTACCAGGAAAACCCATTGGGACAAAACCATGGTTAAGGAAAAAGAGTACAGCACGTATTACTCCCCCTGTTTTGGTCATCCCTGCAAGTCCTTAAGTCTCCGCATTCCAATTTGATGCGTGAGCTTCCTCAATGTCGATGTTGGTAATGCCTTGGTAAAGAGATCGGCTGAGTTGT

ID:

scaffold_1_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

3489

Start:

1198650  

End:

1202138

Strand:

-

>scaffold_1_LTR-Copia_14

CCTGCATCAGCAAAACAAACTAAACCAAAGCAAACTAGACCTTCTTTGGTTAGATCAGTATAGAATAAAACCCAAATAAACAAACATAGGAAGAATAGAATTTAAAATTTAACCAAACCTTCCTTCAAACCTTTCTAGTGCCTTTGGGTTGATCATGAACTAAATTTAGGCAAAGGAGGTTCACGGCAAAACATATGTCTGGTCTAGTGTGGCTAGCCAAGTACATTAACGCTCCTATGGCACTAAGGTATGGCA

ID:

scaffold_1_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

290

Start:

1202120  

End:

1202409

Strand:

-

>scaffold_1_LTR-Copia_15

TCAATACCACATCTATGGCATACTCATTTGGTCGAGTGTTGTGGTTTGGAAATACCACATCGTCCTCGCCCTCGACCACGGCCGGAATTGGGTCTACATCCACGGTTATAGTGGTTCCCACGGCCGGATGAGTTATAGTGGCCACAATCACGTCCTTTCCATCCACCACGGTCACGGCCGTGTGGTCTATCACTTTAGACGTGGTTAGATTCTTTGGATTCTTTCTTATCCTCTGCGGCCTTATTGGCATTAGGT

ID:

scaffold_1_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

419

Start:

1202548  

End:

1202966

Strand:

-

>scaffold_1_LTR-Copia_16

TTGCCTTATTAGATACATTCACCAAGTCCTTTTGACTTTAGGATAATCTTAGTATCCATTGCCCATTTTAAAATAATTATCTCCTAAGAAATTTAGGGCAGTAAAGTACAAGTTGTAATTCAACATCTACAAGGAAAAGTTTTGAGTCAAAATCATGTAATCGTTAGTGTCATGCGGTATTTGAGACCGAACCATGAATCGATTTACTTAGGGATTTGACTTTCCTCTTTTGCTTAGGATTAGATTTCCTCTTTT

ID:

scaffold_1_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

414

Start:

1203529  

End:

1203942

Strand:

-

>scaffold_1_LTR-Copia_17

AAACAATCGAGCAAACAAGCAATCGGATCAAACAAGCAATCAAATCATACAAGCAAAGCAATCACTTAATCAATCATCATTCGTTTTAGGGTTTCTCTTTGCTTAACTTTCAAGTTCAATTGTTGGTTCTTTAGCTTTAGGGTTTTGATGTTACCTTTCACCTTATGGGGTTGTATGGACTAGAACCGGGAGCTAAAGACCTCGGTAACTCACGCTGCTGCAACGAACCGCAAACAGTACCACGATGAACAGTAC

ID:

scaffold_1_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

119

Start:

1236696  

End:

1236814

Strand:

-

>scaffold_1_LTR-Copia_18

TCTCTCGTTTGTAATAAATGCATAAAGGTAATAAATGACACAAAGAATTTAACGAGTTCAGGCCTCCAATGTGGAAACCCTACATCTCGCCGGGGATTTTTACCCCGGAAATTCCACTA

ID:

scaffold_1_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

161

Start:

1247985  

End:

1248145

Strand:

+

>scaffold_1_LTR-Copia_19

AGACACAAGGGAGAGATTAGATGTTACCTAAGATGAAAGGTGATGTTGGCGGTCGGATTCATCGAAATTTTTTGAGACTATCCGATAGGAAAGAAGACGAAGGAGTTGTCTATTGATTCATTGAATTGGGAGCTGCCGTGAAATAGGCAGAGGCTGAAACT

ID:

scaffold_1_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

163

Start:

1567335  

End:

1567497

Strand:

+

>scaffold_1_LTR-Copia_20

GGCCCATGTCCATGTTCTTGAAGATTCTCCTTATGACGGCCTATATTGTACTTAGTGGGCTTTTGGGCTTTAGGGTTTACTAGCCCAATGGGGATTTGTCTCCCCTTGTCATGTATATATATGTATCGAAACCTCATTCATTAATCAATAGAACAACACAGTT