ID:

scaffold_1_LTR-Caulimovirus_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3836

Start:

5554863  

End:

5558698

Strand:

-

>scaffold_1_LTR-Caulimovirus_1

ATAATCTTAAAGCTAGCACGAACGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGATTCGGGCCTCATTGCCATCTGTGTTGCTCAACCTACTATTAGGAACTGTGAACCCCGGCGAGTATTATTGACTGCCGTGTTCGATCGTCGTATTGACGGACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTGTTTAGAATAGA

ID:

scaffold_1_LTR-Caulimovirus_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6589

Start:

7223119  

End:

7229707

Strand:

-

>scaffold_1_LTR-Caulimovirus_2

GCTCTGATACCATAATCTTAAAGCTAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGCAAGGGTTCACTTTCCAGGTAAAGGGAGCGATTCGGGCCTCTTTGCCTCTGTGTTGCTCAACCCACTATTAGGAACTGTGAAACCCCGGCGAGTACTATTGACTGCCGTGTTCGACCGTCGTATTGACGGACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTG

ID:

scaffold_1_LTR-Caulimovirus_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

400

Start:

7229708  

End:

7230107

Strand:

-

>scaffold_1_LTR-Caulimovirus_3

CTGATCAGATCGCGAACACTTTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAAGGATTAACCAACGGGAGAGTTGTTTCCGGCAACTGATCTCCGGGAACATATTCAATCTCATACAAGGAATTTATCTTAGAAAGAGAATTATTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATAGAAGGATTTAGCTGAGGGTGTTTAGGAGGCTTAGAAAGAGACATGATTGAGAGT

ID:

scaffold_1_LTR-Caulimovirus_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

485

Start:

16311374  

End:

16311858

Strand:

+

>scaffold_1_LTR-Caulimovirus_4

CATGATTACACCCACCTTCACTATGGAGCGATACGCCTAGCTTTAACCCTCCATGGAAGAAAAGGTCTACATGTTGTAGCAAGAGTCGCTCTTCTCGACACCAGATACAGAGAATATCAGCACGCTTGCATCGCAACAATCCAGACCACCCTAAACGCTGGTACTGTCTTTGTCACACTATTCCCAAACTTCAACGTGGCGCTTGAAGATCCCCATGTCTACCAGAATATGCAGATCCAGCTTCAAATCACAGGT

ID:

scaffold_1_LTR-Caulimovirus_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

482

Start:

16312217  

End:

16312698

Strand:

-

>scaffold_1_LTR-Caulimovirus_5

ATGGAGTTTCTCATAGTCGTCACCCATGATTCAGGAAGTAACTTGACCAGTTCTTCTCTAGGGATTTGTCTTGGAATATGGATGCATGAAGGGCTGTACTGTGATTCCAGCTGAATGAGCAGAGCATCCTCTGTATCACTAGGAAGGCTAAGATCCATAGAATGGTTTTGGACTCGGTACGCCATCTGATGATGGAGTGTTGCCGCATAAGTATTTCTGACTTGCGGAGCACCTGTGATTTGAAGCTGGATCTGC

ID:

scaffold_1_LTR-Caulimovirus_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

414

Start:

25825372  

End:

25825785

Strand:

+

>scaffold_1_LTR-Caulimovirus_6

ATGAAACCTTGCTTGTAAATACAACTCGTCGTCTAGACTTAGTCAACACGACCCTCCGCTCGTGCTAACCTTAAGATTATGGTATCAGAGCCAAGGCTTGTGTTAAGGTAGAGCGAATCATTGTTTATGACTGATCGTTTTGAATGTTCTGGAAAACAAACTCTCAATCATGTCTCTTTCTAAGCCTCCAAAACACCCTCAGCTAAATCCTTCTATAGATTCTTAATTTGCTATATCTACTTTACCAAAAATCCA

ID:

scaffold_1_LTR-Caulimovirus_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6631

Start:

25825786  

End:

25832416

Strand:

+

>scaffold_1_LTR-Caulimovirus_7

GCCTTCTTCCAGTCGACGAGTATTGGAGTACGTACAATCCAGCAAGTTTTCATCATGTCAAGTTCCAGCTACCGAAGAAGAACAATTCATCTCGCTAAATATTCTGGAGCATCTACCAAGGCTATGGCAGTAGCAGGGCTACACTCATCTACACTTTGGTGTAGTACGAATCGGTTTAACCTTACATGCACGAAAAGGTTTACCGGTTGTAGCACGAATAGCTTTGCTTGACTCAAGGTTCAAATCCTATCAACA

ID:

scaffold_2_LTR-Caulimovirus_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5895

Start:

12240780  

End:

12246674

Strand:

-

>scaffold_2_LTR-Caulimovirus_8

ACGAACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTGTTTAGAATAGAAAGAAACAAGGTTTATGAAGAAAGTAGGAAGTCTGGAAAACTTAGAGAGAAGTTAGAGAAACATTTAGAGAGAGAAAGCTATTATGAAATTTTATATGATATTTCAAGTTCTGATTTCTTACAAGGGGTACACACTTATTTATAGGAGGTTTTTAAGGCGCTGACATAAGCGCTTACCTCAGCGATACATCATC

ID:

scaffold_2_LTR-Caulimovirus_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

107

Start:

14562231  

End:

14562337

Strand:

+

>scaffold_2_LTR-Caulimovirus_9

GCATTTACATCTCGGTTTGGTACAACTTCAACCAGCAATTTCAAAACAAAGGTGGCAAGAACTAAACCAAGGCGTCAAAAGGATTCTGAGTTTCACATTAATCCATC

ID:

scaffold_2_LTR-Caulimovirus_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2426

Start:

15180442  

End:

15182867

Strand:

-

>scaffold_2_LTR-Caulimovirus_10

ATCATAATCTTAAAGCTAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGATTCGGGCCTCTTGCCTCTGTGTTGCTCAACCCACTATTAGGAACTGTGAAACCCCGGCGAGTACTATTGACTGCCGTGTTCGACCGTCGTATTGACGGACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTGTTTAGAATA

ID:

scaffold_2_LTR-Caulimovirus_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3754

Start:

15182969  

End:

15186722

Strand:

-

>scaffold_2_LTR-Caulimovirus_11

TGCATGGCTTGCTTTTGTTGGTGTTGTATGAACATCTTCTTTGAATGGTAGGGATACGAAGAAGCTTGAGTTTAACCATAGCGGGTGATTACACTTTTGAAGGAACTCCGTGTGTGAATCTGAACATGATGCCATCTTTAGTTCTTCTTCAATTTTGTTGAATTCTGCAGATACTGAGTCTTCGATTGAGAATAGGCGATGCATCGTGGTAAAAGCTTTGTAGAGGTTTTTCCATCTCACGCCTCTTGGTTCTAG

ID:

scaffold_2_LTR-Caulimovirus_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

341

Start:

15186724  

End:

15187064

Strand:

-

>scaffold_2_LTR-Caulimovirus_12

TGATTAGATCACGAACACCTTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTTATAAGGATTAACCAACGGGAGAGTTGTTTCCGGCAATTGATCTCCGGGAACGTATTCGATTTCATACAAGGAATTTATTTTAGAAAGGGAATTATTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATAGAAGGATTTATCTGAGGGTGTTTGGGAGGCTTAGAAAGAGACATGATTGAGAGTT

ID:

scaffold_3_LTR-Caulimovirus_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3494

Start:

486292  

End:

489785

Strand:

-

>scaffold_3_LTR-Caulimovirus_13

ATCTTCTCCTGGTTGAAATTTATGTAGAATTTGAACTTCTTTTCGATTTCTTCAACGTTTACTTCATCATCTGGGGATTGAGCGTCTTTGAAGTAATCGGCACAGTAATCTTGAGAAGTCATCTGGGGAGTTGTCTCTTGTTTATCTTCTTTTGGACTGCTTGGTCTTCCTTTGTTGAACTTCATCATGTGATACTGTAAATCTTCATCAAGTTGCATCTGATAGTCGACTGGATAATAAACCCAGTTAGGTATG

ID:

scaffold_3_LTR-Caulimovirus_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

85

Start:

489775  

End:

489859

Strand:

+

>scaffold_3_LTR-Caulimovirus_14

ACAGTTTCAAGACATCATCAAGAAAACCGGAATCATGCTATCAGCCAGAAAGATGATAATAGCCCAGCCCAACATTGATTTTCTT

ID:

scaffold_3_LTR-Caulimovirus_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

149

Start:

489862  

End:

490010

Strand:

-

>scaffold_3_LTR-Caulimovirus_15

GTGAATTGTTGTATCACCACTTCTGTTGGGGAAGTGATTGCTTCGGAGGTCATCCATGCATGAAATTCGTCAAGACGACTATTCCATTTTTCAAAAGGAATGTCATCGAATGTGAACACCATTATCTTTGATGCAAATTGTTTCTTTGG

ID:

scaffold_3_LTR-Caulimovirus_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

271

Start:

489997  

End:

490267

Strand:

-

>scaffold_3_LTR-Caulimovirus_16

AATTGTTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATAGAAGGATTTATCTGAGGGTGTTTGGGAGGCTTAGAAAGAGACATGATTGAGAGTTTGTTTTCCAGAACATTCAAAACGATCAGTCATAAACAATGATTCTCTCTACCTTCACACAAGCCTAGGCTCTGATACCATAATCTTAAAGCTAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGC

ID:

scaffold_3_LTR-Caulimovirus_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1087

Start:

490253  

End:

491339

Strand:

+

>scaffold_3_LTR-Caulimovirus_17

AGGGTTCACATTCCATCAACAAGCTTGCATCGGAACAGTACAAACAACGCTGAACGCAGGAACAGTATTCATAACACTGTTTCCCAATTTCAATGTCTCACTACAAGATCCAAATCTCCTGAAGGCGCTTAAGGTTCAATTACAACTAATCGGAGCACCTATGCAAGAAGAAAGTGTGGCAGCAACTCTACATCATCAGATCGTATACAGAATCCAAGATCATGCTCTCGATCTTGCACTACCAGCATCAGATGA

ID:

scaffold_3_LTR-Caulimovirus_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

110

Start:

491321  

End:

491430

Strand:

-

>scaffold_3_LTR-Caulimovirus_18

GCAAGGAGCCATATCAGAGGAAACAGAGGACTTCTTCTGGCATATTTGAATTTTCGATCCTGTAAAGATGAGCAAACGGATAGTCAGGATGAATTCCCATTGGAGCAATG

ID:

scaffold_3_LTR-Caulimovirus_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

118

Start:

6002344  

End:

6002461

Strand:

-

>scaffold_3_LTR-Caulimovirus_19

AGTCGAAATGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGATTCGGGCCTCTTTGCCTCTGTGTTGCTCAACCCACTATTAGGAACTGTGAACCCCGGCGAATACTATTG

ID:

scaffold_3_LTR-Caulimovirus_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

405

Start:

8402640  

End:

8403044

Strand:

+

>scaffold_3_LTR-Caulimovirus_20

CTTGCTTGTAAACACGACTGTCGTCTAGACTTAGTCAACACGACCCTCCGCTCGTGCTAGCTTTAAGATTATGGTATCAGAGCCTAGGCTTGTGTGAAGGTAGAGAGAATCATTGTTTATGACTGATCGTTTTGAATGTTCTGGAAAACAGACTCTCAATCATGTCTCTTTCTAAGCCTCCCAAACACCCTCAGATAAATCCTTCTATAGATTCTCAATTTGCTATATCTACTTTACCAAAAATCCAAAGAAATA