ID:

scaffold_1_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

104228  

End:

104584

Strand:

-

>scaffold_1_LTR-Cassandra_1

TGTAACGCCCTGACCGTCCCTACCAGTGGGCCCCACGTCTTCTCTCGGGCCCATGGGCCCACCCCTGTCTGACGGCCGGTCCGCTACGTCCGGAAGACTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTACTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAATTACTCCAGTTCAAGCACCCTTAACTGTGGAGTTCTCTCAGGACCG

ID:

scaffold_1_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

9844434  

End:

9844792

Strand:

-

>scaffold_1_LTR-Cassandra_2

TGTAATGCCCTCACCGCCACCTCACTTAATGGGCCCCACGTCCTCTCTCGGCCCGTGGGCCCACTATCTTCTGACGGCCGGTTCGCTATGTCCGAGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGATAATAACTTCTCAGAAGGTCACCCATCCTAAAATTGTTCCAGCTCAAGCACGCTTAACTGTGGAGTTCTCTCAGGAC

ID:

scaffold_1_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

9844927  

End:

9845256

Strand:

-

>scaffold_1_LTR-Cassandra_3

TGGGACCCACGTCTTCTCTCAGCATGTGGGCCCACTGTCTTCCGACGGCCCGTTTGCTACGTTCGGGAGGCTTTAAAGACTTGTTTACCAACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTATCTTCACTCACATAGTTCCGACAATCACTTCCCGGAAGGTCACCCACCCTAAAATTGCTCAAGATCAAGCATGCTTAATTGTGGAGTTCTCTCAGGATAGTTGACCGAAAAGATAAGTGCACTTTTG

ID:

scaffold_1_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

10507115  

End:

10507473

Strand:

+

>scaffold_1_LTR-Cassandra_4

TGTAACACCCCGATTTCAGGAATATGGTAGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCTCCTATGTCACAAAAGTGCACTTATTTTTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGCGTGCTTGAGCTGGAACAATTTTAGGATGGGTGACCTTCTGAGAAGTTATTATCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTT

ID:

scaffold_1_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

11942416  

End:

11942772

Strand:

-

>scaffold_1_LTR-Cassandra_5

TGTAACATCCCGACCGTCTCTATCAGTGGGCCCCACGTCATCTCTCGGGCCCATAGGCCCACCTTTATCTGACGGCTGGTCCGCTACGTCTTGGAGGCATTAAAGACTTGTTTACCGATCCTACAAATCACCATATAATCTTTTTCTGTGTTTTGTCTTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTTATGCCCAAACATGCTAAACTGTAGAGTTCTCCCAGGACAG

ID:

scaffold_1_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

192

Start:

12936075  

End:

12936266

Strand:

-

>scaffold_1_LTR-Cassandra_6

TAATTTTTTTTTATTTTGTCCCCACTTACAAAGTATAATTGGAATTTACTTCCCAATAATCTATTCATTTTAAAACTGCTCCAAATCAAACACATCCAATTATGGAATCGTCTCAAAATGTTTGATTGGAAAAATAAATTAGTGACATAATTAAATCAATTGTTTTAAACTTTTCTTATTCACCACCATATT

ID:

scaffold_1_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

15288438  

End:

15288796

Strand:

-

>scaffold_1_LTR-Cassandra_7

TGTAACACCTCTACTGTCCCTACCAGTGGGCCCCACATCCTCTCTCGGGCCCATGGGTCCTACGCCTGTCCGACGGCCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCATATAGTTTCGATAATCACTTCCCGGAAGGTCACCCATCCTGAAATTGTTCCAGCTCAAGCATGCTTAATTGTGGAGTTCTCTCAGGACA

ID:

scaffold_1_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

15288797  

End:

15288908

Strand:

-

>scaffold_1_LTR-Cassandra_8

ATTCACCCCCACTAACAGATCGCAACGTCCTCGTTGCGCACCAAGACCGTCACTCCCGACGGTGTGAGCCCTCTTGACTCCACACACGTCTAGGTTCGGCTCTGATACCACT

ID:

scaffold_1_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

15288909  

End:

15289256

Strand:

-

>scaffold_1_LTR-Cassandra_9

TGTAACGCCCCGACCGTCCTTACCAGTGGGCCCCATATCCTCTCTCAGGCCCATGGGTCCCACACCTGTTTGACGGACGGTCCGTTACGTCCGGGAGGTTTTAAAGACTTGTTTACCGACCTTATAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCACATAGTTCCGACAATCACTCACCCGTCCTGAAATTGCTCCAGCTCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACAATTGACCGAAA

ID:

scaffold_1_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

15358087  

End:

15358419

Strand:

+

>scaffold_1_LTR-Cassandra_10

TGATGGTGCATGCAATTTTATGATAAATGATTTTGGCTACATATGTCACCAAAATGTAGTTGTCTTTTTCGTAAATTAAATCATCCTAACAGAACTCTTGAGTTAAGCGTAGTTGAGCTGGAGCGATTGAAAGATGGATGACCTACTGGAAAGTGATTTTCGAGTATGTGTGAGTGAGAACAAAACATGTGAAAAAATCTAGTGGTGGTTTGTTAGATTGGTAAACAAGTCTTTCGAACCTTACGGAGTAACGCA

ID:

scaffold_1_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

16039196  

End:

16039549

Strand:

+

>scaffold_1_LTR-Cassandra_11

TGTAACACCTCGGTTTCAAAAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCAACCTATGTCACCAAAGTGTACTTTTCAGTCAACTATCCTGAGAGAACTCCACAGTTAAGAGTGCTTGAGCTGGAGCAATTTATGGATGGGTGACCTTCCGGAAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAAGGAAGTATCATGTGGTGATATGTAGGGTTGGTAAACAAGTCTTTAAAG

ID:

scaffold_1_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

115

Start:

16039550  

End:

16039664

Strand:

+

>scaffold_1_LTR-Cassandra_12

AGTGGTATCAGAGCCAAACCCAGACGAGTGTGGAGTCAAGATGATGGCTCACACCGTCGGGGGTGACGGTCTTTCTGCGCAACGAGAACGTTACGATCTGTTAGTGGGGGTGAAT

ID:

scaffold_1_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

16039665  

End:

16040024

Strand:

+

>scaffold_1_LTR-Cassandra_13

TGTAACACCCTAGTTTCAGGAATATGGTAGTGCATGCGGAGAAGTTTTAAAGAAATGATTTGGCGACCTATGTCACCAAAGTGCACTTATCTTTTCAGTTAACTATCCTGAGAGAACTCCACAATTAAGGATGCTTGAGCTTGAGCGATTTTAGGATGGGTGACTTTCCAGGAAGGGATTGTCGGAATCGTGTGAGTGAGGACAAAACACAGAAAAAGATCATGTGGTGATTTTTAGGGTTGGTTAAACAAGTCT

ID:

scaffold_1_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

177

Start:

16040087  

End:

16040263

Strand:

+

>scaffold_1_LTR-Cassandra_14

TGTAACACCCTAGTTTCAGGAATATGGTGGTGCATGCGGAGAGAAATAATTGATTCGGCCACCTATATCACCAAAGTGCACTTATCTTTTCGGTCAACTGTCCTGAGAGAACTCCAGGGTTAAGCGTGCTTGAGCTGGAGCAATTTCAGGATGGATGACCCTTCGGAACGTTATTGT

ID:

scaffold_1_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

114

Start:

16142423  

End:

16142536

Strand:

+

>scaffold_1_LTR-Cassandra_15

TGTAATATCTTGGTTTCAGGAATATGATGGTGCATGAAAAGAGGATTAAAAGAATTGATTTGACCACCTATGTCACCAAAATGCACTTATCTTTTTGGTCAACTGTCCTGAGAG

ID:

scaffold_1_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

245

Start:

16144949  

End:

16145193

Strand:

+

>scaffold_1_LTR-Cassandra_16

GAGAACTCCATAGTTAAGGGTGCTTGAGCTGGAGCAATTTCAGGATAGGTGACCTTCCGGGAAGTGATTATCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGATGATTTGTAAGGTCGATAAACAAATCTTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCGGAATATGGTGGGTCCACGGGCCGAGAGAGAACGTGGGGTCCACTTAAGGTGGCGGTCGGGGCGTTACA

ID:

scaffold_1_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

16531773  

End:

16532128

Strand:

-

>scaffold_1_LTR-Cassandra_17

TAACGCCCCGATCGTCACTTATCTTAGTGGATCCCATGTCCTCTCTCGGCCCATGGGCCCTCCCGTTCTGACGGCCGGTCCGCTACGTCCGGGAGGGTTTAAAGACTTGTTTACCGATCCTACAAATCACCACATTATCATTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCAGTTTCCGAAAGGTCACCCATCCTGAAATTGCTCTAGTTCAAGCACCAATAACATTGGAGTTCTCTAAGGACAGT

ID:

scaffold_1_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

16532129  

End:

16532239

Strand:

-

>scaffold_1_LTR-Cassandra_18

ATTCACCCCCACTAACAGACCGCAATGTCCTCGTTGCACACCAAGACCGTCACTCCGACGGTGTGAGCCCTCTTGACTCCACACTCATCAGAGTTCGGCTCTGATACCATT

ID:

scaffold_1_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

16532240  

End:

16532598

Strand:

-

>scaffold_1_LTR-Cassandra_19

TATAACGCCCCGACCGTCACTTCTCTTAGTAGGCCCCACGTCTCCTCTCTGCTCGTGGGCCCACCCGTGTATGACTGTCGGTCTGCTACGTCCGAGAGGCTTGAAAGACTTGTTTATCGACCCTACAAATCACCACATGATCTTTACCTTTGTTTTTTCCTCACTCACACAGTTCCGACAATCACTTCCCGAAAAATCACCCATCCTGAAATTGTTCCAGTTCAAGCACCCTTAACTTTGGAGTTCTCTCAGGAA

ID:

scaffold_1_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

16761457  

End:

16761811

Strand:

+

>scaffold_1_LTR-Cassandra_20

TATAACACCCTGATTTCAGGAATATGGTGTTGCATGCAGAGAGGTTTAAAAGAATTGATTTGATCACATATGTCACAAAAGTGCATTTATCTTTTCGGTCAACTGTCCCGAGAGAATTCCACAGTTAAGTGTGCTTGAGTTGGAGCAATTTCAGGATGGGTGACCTTCCGGCAAGTGATTGTCGGAACTGTGTGATTGAGGACAAAACACAAGGAAAGATCATATGGTGATTTGTAGGTTGGTAAACAAGTCTTT