ID Class Order Superfamily Length Start End Strand View
scaffold_1_LINE_1 RetrotransposonsLINELINE203926440926642-
scaffold_1_LINE_2 RetrotransposonsLINELINE1071382473913824845-
scaffold_1_LINE_3 RetrotransposonsLINELINE1711547950715479677-
scaffold_1_LINE_4 RetrotransposonsLINELINE3422866756128667902-
scaffold_1_LINE_5 RetrotransposonsLINELINE4943069786930698362+
scaffold_1_LINE_6 RetrotransposonsLINELINE1063291443232914537+
scaffold_2_LINE_7 RetrotransposonsLINELINE241191103191343+
scaffold_2_LINE_8 RetrotransposonsLINELINE346353744354089+
scaffold_2_LINE_9 RetrotransposonsLINELINE55311863731186925-
scaffold_2_LINE_10 RetrotransposonsLINELINE58911881331188721-
scaffold_2_LINE_11 RetrotransposonsLINELINE9685046188504713-
scaffold_2_LINE_12 RetrotransposonsLINELINE3491316250813162856-
scaffold_2_LINE_13 RetrotransposonsLINELINE2001316364813163847-
scaffold_2_LINE_14 RetrotransposonsLINELINE1141509221115092324-
scaffold_2_LINE_15 RetrotransposonsLINELINE3631672607416726436-
scaffold_2_LINE_16 RetrotransposonsLINELINE1181914570619145823+
scaffold_233_LINE_17 RetrotransposonsLINELINE20889499156+
scaffold_233_LINE_18 RetrotransposonsLINELINE923925610178+
scaffold_275_LINE_19 RetrotransposonsLINELINE17952745452+
scaffold_3_LINE_20 RetrotransposonsLINELINE119450247175025910-

< 1 2 3 4 5 > Total 5


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

203

Start:

926440  

End:

926642

Strand:

-

>scaffold_1_LINE_1

TTTTTTTTTTTTTGGTAAAAAGTGAAATTTTATACTATTTTAAATTTTTGACAGAAGTTACAGAGATTAATAGAAACAGATTAGAGCACACTACGGAAAAATAAAAACAACATTATTACTCAAAAATGTTTCGGATCGTTTATGAGTGAATATGGCTAAGTTGCGAAAAGAAACACTGATTCTGATATCCCGAAGCTCGGAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

13824739  

End:

13824845

Strand:

-

>scaffold_1_LINE_2

TTTTTTTTTTTTGGAATCAATGTTAAATATTTATACTATTTTCGCAAGTTTTTGACAAAATATTACAAGAAAATACAAAGAGCAGAAGAAAAAAAAACTTAAAAACA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

171

Start:

15479507  

End:

15479677

Strand:

-

>scaffold_1_LINE_3

GAAACACCGATTCCGAGCCGCGAAGCTCAGACATTTGCGAAATTGCCTCAGCTCCAAAGAACTGGAATCCTCATCGTCGTTGCCACGAGCAAAATCTTCACGAAGCAAGTCCTTAAAACCTCAAAGAAGAGACCGCCTACAGCTTCTCCGAGGACTAACGCAAAAACGGAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

342

Start:

28667561  

End:

28667902

Strand:

-

>scaffold_1_LINE_4

TTTTTTTTTGGTAAAAAGTTAAGTTTTATACCATTTTCAGTTTTGCGACAGCGATTACAGAGAAAACGAAAAACACAGAACAACCAAAAACTACAACTAAAAGATCTACGAATACAAGAGAAAACACAACAAGGAAAGCAACAGCGAAACAACCAACAGAGATCCGAAGAAGAAACACCGATTCCAAGCCGCGAAACTCGGACATTTGCGTGATTGCCACAACTCCAAAGAGTTCGAGTCCTCATCCTAGTTGCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

494

Start:

30697869  

End:

30698362

Strand:

+

>scaffold_1_LINE_5

TTCGTCCCTGTCACAAGTCTCCGGTGCTTTAAGGAAGAGTTTTGGTTGTGACTGGTGTTGTAAGTGTTGGTTCATTTTGTGAAGGTGAGCTGCTAGGTGCTTTGGCAAGGTTAGTCGAGTGTTGAGTAGAGGCGGCGAATAGGTATAAGTGGCGTCGCTAACTCGATGAGCTAGTGTAGAAGTCCATGGTTGCGTTAGTTCTCGGAGAAGCTGTAGGTTTCTATCTCGAAGTTTAGAGGACTGATCTCAGTTAGA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

32914432  

End:

32914537

Strand:

+

>scaffold_1_LINE_6

TTTGCTTTGCTGTATGTATTTCTTAGATTTTGTTTTTTTTCTGCTGTAACCTTCTGTCAAAATCTATAAATGGTATAAAACTTAACATTCATACCAAAAAACAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

241

Start:

191103  

End:

191343

Strand:

+

>scaffold_2_LINE_7

GCTCGTGGCAAATAGGATGGGACTCCAACTCCTAGGAGTTATGAAAATCACGCAAATTTCTGAATTTGGTTTTTCGGAATCGGTATTTTTTTCTCGTTTCCGCTTTGGGCTTACGTTTTCCTCCGTTATTGTTTTGTTATTGTTTGTTATTCTGTAGATTTTGGTTTTCTCCTATACTTGTATTTTTGTAATTTCTGTCAAAACTTCGAAAATGGTATAAATTATTCACATTGATACCAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

346

Start:

353744  

End:

354089

Strand:

+

>scaffold_2_LINE_8

TTCCGTTTTTGCGTTAGTCTTCGGAGAAGCTGTAGGCGCCCTTCTTTCTCGAGGTTTTGGGACAGACTTCGGGTAGGGTTTGCTCGTGGCAACTAGGATGAGGACTCGAACTCTTTGGAGTTGTGGCAATCACGCAAATGTCCGAGTTTCGCGGCTTGGAATCGGTGTTTCTTCTTCGGATCTTTGTTGGTTGTTTCGCTGTTGCTTTCCTTGTTGTGTTTTCTCTTGTATTCGTAGATCTTTTAGTTGTAGTTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

553

Start:

1186373  

End:

1186925

Strand:

-

>scaffold_2_LINE_9

TTCTTTTTTTTTGGTAAAAAATTAAATTTTATACCATTTTTGATTTTTGACAAAATTACAGGGATTACAAGAATCGGACTAAAGCAATCTACAGAAAATAAATACAACATTACTACTCAAATTGCTTCGGATCGCTTCTAAACGTTCAAGGCAAAGTTACGAGATGAAACACTCATTCCGAGCCAGTGAAACTCGAAAATTTGCGTGGTTGACACAGAATCGAAAAACTGAAATTCTCATCGTAGTTGTCACGAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

589

Start:

1188133  

End:

1188721

Strand:

-

>scaffold_2_LINE_10

ATACCCATGGCTGAGGAAGCTGCCTCCCTCTACAGCCTACCAATGGAAGAGAGATGTTAACCACCAACAACAACCACAACACCCGCAACAAACAAATCAGAGAACCAAAAAAGATCTCGTGACTTGCCTCCACAAGAGAAACCCGCCGGAATCCTAACACACCAACACCGGAGCGGAAAAAACTAAGGTGGAGAGACCCGAGAAGAGAAGATTTGTCACACCGAAAGCTCCATGTAGTGCCCAAATTACAAGAGG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

96

Start:

8504618  

End:

8504713

Strand:

-

>scaffold_2_LINE_11

TCATCATTGTTGCCACGTGCAAATCTTTCCTAAAGCAAGTCCTCAAAACCTCTAGAAAGACTGCCTACAGCTTCTCCGAAAACTAACGCAAAAACG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

349

Start:

13162508  

End:

13162856

Strand:

-

>scaffold_2_LINE_12

TTTTTTTGGTAACAATGTGAAAGATTTATACCATTTTCGAATTTGTAACAGAAGTTACAAAGAAAACAATTAGCGGATCAAAGCAATCTACAGAAAGTAAAGAGACAACATCACAGCTCAACAACAATTGAACACTAGCGAAAACTAAGAGCAAAGCCGCGGAAAGAAACACCGATTCCGAATTGCGAAATTCGGAAATTTACGTGATTTCCACAAGTCAAAGACTTGGAGTTCCATCTTAGTTGCCACGAGCAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

200

Start:

13163648  

End:

13163847

Strand:

-

>scaffold_2_LINE_13

GCGGAACGCTCCTTGCCACCGTGCGAAGAAATCCACCGCGCACCACCAACAAGAGACGAAGGGCCGAATCGGAAAACTGAAACTAAAACAACGGAGCACGGGAGGAGAAGAAACAACAGAGACATCAAAGAAGGAGAAGGAGGAGCCCTCCCCGTATGCCGGCAAGGAATGCTGCGAACGGGGAGGCGGATCTAGGTTTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

114

Start:

15092211  

End:

15092324

Strand:

-

>scaffold_2_LINE_14

CAAAGAAAACACCAACAAGACTAAGAACAAAGCAAAGGAACAACAACAAGAGCCCTCTCGCGGTGCCGGTGAGAAGCACCGACCACCGGAGAGGCAGATCTAAGAATCGATTTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

363

Start:

16726074  

End:

16726436

Strand:

-

>scaffold_2_LINE_15

TTTTTTTTTTTTTGGTAAAAGGTTAAGTTTTATACCATTTTAAGATTTTTGACAGAAGTTACAGAGATAAACTAGTAGCAGAAAAGACCGAAAACCAAACAAGAGAAACGAACAACTACAAATAAAAAAGCAACAAGGAAAGAACACAAGCGACAACCCATCTAGTAGAGAACCGAGAAGAAACACCAATTCCGAACTGAGAAACTCGGACATTCGTGTGATTGCCTCAGCTCCTAAGAACTCGAGTCCTCATCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_2_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

118

Start:

19145706  

End:

19145823

Strand:

+

>scaffold_2_LINE_16

TTGTATTTGATTGTTTATTCTGTAGATTTTGTTTTTTCGGCTACTTGTATTTTTTGTAATTTCTTTTGAAAATTCGAAAATGGTTTAAAATCTTCACATTTTACCAAAAACAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_233_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

208

Start:

8949  

End:

9156

Strand:

+

>scaffold_233_LINE_17

AAACCTAAAATCAAAATTTTGATCTGCCCACTCCGGCGACGGTGCTCCTCACCGGTTGCCGGAGAGGGCCACTCTCTCTTCTCCTTTTCTCTTGTTGTCTTTTCCGTGCTGCCTTTGTCGCTCCGGTGGAGATCTGTCCATGGCTGGATTTTTGTTCTTGATGGTGGTGAAGCGGCGAGAGGTCTCGCTTCTCGCACGGTGCAAAGAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_233_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

923

Start:

9256  

End:

10178

Strand:

+

>scaffold_233_LINE_18

CATGCAGCGTGATTATAGTCGGTTCTGGTGTTGGCTCAGGTGAGGCTTTTGTTCAGCGGTTTAGCCCCTCGCGGCGGGACCATTCTTCCGATCTGAGATACCGATGGTGCATCGCCGTGTTCTTCAGTCATCGCCGTTGTTCCTTTTGTGGTTTGGGCTCACCGGTTTGTCTTGGCGAGACGGTTTTTCTCTTCTCGGTCTCTCTATCTTCTTTTTCTCCAGCACCGACGGTGTCGTCTCTGGATAAGGCGGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_275_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

179

Start:

5274  

End:

5452

Strand:

+

>scaffold_275_LINE_19

GCCTTCCCGTTTTTGTGTGTGTCCCTCGGAGAAGCTGTAGGTGATCTTTTGTGAGGTTTGAGGGCTTGCCTAAGGAAGAGGTTGCTCGTGGCAACGATGATGAGAACTCGAGTTTTTAGGAGCTGAAGCAATCACACGAATGTCCGAGCTTCTCAGTTCGGAATTGGTGTTTTTTCTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_3_LINE_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

1194

Start:

5024717  

End:

5025910

Strand:

-

>scaffold_3_LINE_20

TTTTTTTTTTTTTGGTAAAAGGTGAAATTATATACCATTTTGAGATTTTTGATAGAAGTTACAGAGAAAACAAGAACGGATAAAAGCACGCTACAGAAAATAAAAAACAACATTACTAATCAAAAAGTTTGGGATCGCTGTTGAGAAATTATGGCCAAGTCGCGAGAAGAAACACCGATTCCGAGTCCGCGAAACTCGGAAATTTGCGTGATTGCCACAATACCGAAGTATTGGAATCCTCATCGTTGTTGCCAC