Arabidopsis halleri (v2.2)
ID:
FJVB01000001.1_LTR-Caulimovirus_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
306Start:
1963069End:
1963374Strand:
+>FJVB01000001.1_LTR-Caulimovirus_1
CAGTCCATCCAAGAAGCCAAGTCTAGCATCCTCATCAAGCCATGAGTCGGTTCAAGATGAAAAGAAAGAGGATATTGCGAAGAAAGAAGATATTGGGATGATCGAATTCTCAATGACTAGTTTGCTAGACAATCTTGCGAAGACATCTGACGACGAAAGACGAGAATTGCAAATTCAATCAACAGAGCAGCAGCCACAACCAATCGTTACAATAAATCACATTTCAGCTCTTTCAGATACAACCTCTTCCGTCAACGAATCAGAAACAGATGAATCTCTTCCAAATCAGTTTGCGATAGGAGATGA
Arabidopsis halleri (v2.2)
ID:
FJVB01000002.1_LTR-Caulimovirus_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
513Start:
1358323End:
1358835Strand:
+>FJVB01000002.1_LTR-Caulimovirus_2
TGCTTTCGACATCCAGTGGCTATACCATTACGTCAACATTGTTCAAGAAAAAAGAGACTGCTTCTCAACGTTCCTAAGGTGGTTTTCACCGTTGACTGTCTGGAGTGGAAAACTACGAAAATCCGCAAAAGCGACGAATCTAACATTCAAGAAGCTGAAAAGAGGTGGACTCAACCCGTACTTCAATCCACATTCAATCTACTTCTTTCATCGTCCCGTTAAGGTCAACCGCAAAATAAGCAAAATTCTCGCTCTTCCGACTCTCATTCATCACAGTGATTTTTCAAGAGGAGTTCGTCCAGATTTCAACCTTCAAGATAACGAAGCATACGAAAACTTCCAAACTCATGCGTTTCACCTCAACAATGCAAGACAGACGTTTCCTATTCCGTTCATTCCCAACTGGGTTCACTATCCGGTCGATTACCAGATGCAGCTTGATGAAGATTTACAGTATTACATGATGAAGTTTGACAGAGGAAGACCAAACAGTTCAAAAGAAGATACATCAAG
Arabidopsis halleri (v2.2)
ID:
FJVB01000002.1_LTR-Caulimovirus_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
598Start:
1358836End:
1359433Strand:
+>FJVB01000002.1_LTR-Caulimovirus_3
CATCTGCACTTTGGCGTAGTAAGAATTGGTTTAACCTTACATGCACGAAAAGGTTTACCGGTTGTAGCAAGGATAGCTTTGCTTGACTCAAGGCTCAAATCTTATCAACAAGCTTGCATCGGAACAGTACAAACAACGCTGAACGCAGGAACAGTATTTATAACACTGTTTCCAAACTTCAATGTCTCACTRCAAGATCCAAATCTCCTAAAGGCKCTTAAGGTCCAATTACAACTRATCGGAGCACCTATGCAAGACGAAAGTGTGGCAGCAACTCTACATCATCAGATTGTATACAGAATTCAAGATCATGCTCTTGATCTTGCATTACCAGCATCAGACGAGGCTTTATATCTTGAAGTCACATCGGCGTCACAAGCACCCAACTCTATTCAAATCCCAAGACATATATCTCGAGAAGAATTGCTGCGAAAATTACCAGAGTCATGGATAACAAGATATGAGAAGATACATCAAGCATCTCAAGCACCGATCCAGTCATCGGAAGTAAGCTTTCACTCTAGAAGCGATGGAACCACGGAGATAAAGTTCGAAAAACCAAGATCATCTTTTCAAAAGAAACTCTTTACTCAATTCA
Arabidopsis halleri (v2.2)
ID:
FJVB01000002.1_LTR-Caulimovirus_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
346Start:
1359428End:
1359773Strand:
->FJVB01000002.1_LTR-Caulimovirus_4
AATTCAGATTCCTTTTGACGCCTTGGTTTAGTTCTTGCCACCTTTGTTTTAAAATTGCTGATTGAAGTAGTACCAAACCGAGATGTAAAAGCTTCGTCAGAGGATAAGAATCCAGGTACAGGCTGTTTCGGTTTTGGATCTTGATAACCGAACAGAAACCCTGGGGAATACGATTCTTGATATGTGGGTAATCCAGATGACATATAGTCAAAAGGATTATACACATTTACTCGCCTCTGATTCTGGACTAGACTGTCTAGGCTCCTTTGAAGGTCTTTGAGTTGATATTTGAGATTGGTTTGCTCAGCTTCTTTACTTCTGAACTGAGATGTATCAACTTTCATTT
Arabidopsis halleri (v2.2)
ID:
FJVB01000007.1_LTR-Caulimovirus_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
117Start:
1241772End:
1241888Strand:
->FJVB01000007.1_LTR-Caulimovirus_5
GGAGTATCTTTTTATACAGCTAACATTGTTGTTTCGTCTTTATCATCTTGCAATAAACATCGAAGATTAAATTAAGATTAAATTACTTGAAAAAAAAAATCTGTATAACAACAAATA
Arabidopsis halleri (v2.2)
ID:
FJVB01000010.1_LTR-Caulimovirus_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1883Start:
1270221End:
1272103Strand:
->FJVB01000010.1_LTR-Caulimovirus_6
TTGCTTGTCTTGCGATTGACCTTAACGGGACGATGAAAGAAGTAGATTGAATGTGGATTGAAGAACGGGTTAAGTCCACCTCTTTTCAGCTTCTTGAATGTTAGATTCGTTGCTTTGGCGGATTTTCGTAGTTTTCCACTCCAGATAGTCAATGGTGAAAACCACCTTAGGAATGTTGAGAGGCAGTTTCTTTTGTCTTGAACAGTGTTGACGTAATGGTAAAGCCACTGGATGTCGAAAGCAATTCCTACAGTGTAGACAGCACATAGATACCAGAGGAAACAGAGAACTTCTTCTGGCATRTTTGGATTCTCAATCCGGTAGAGATGTGCAAACGGATAGTCAGGATGAATTCCCATTGGAGCAATGTGGTGACAGTTTACTCCATATTTCGATAGGATTGTAGATTGATACGAAAAGATCTTTGTGCTCATTTGTTCATGAAGCTTGTCTTTGCTGATAAGYTGATGAACATCTTCAGGTACGTCAGCTTCAAAGTCGTAGTAGCTCTTCTTGGATTCAGAGGAACCGGCCATCATGTGTATCTCGTAGGRCGTTTCTTGTTTGACTGGTTTTCGGCTAAGCATGTCAGCCAAAGTGTTCTTGGTGCCCTTTAAATAGACCGACTCGAAATCGTACTTAGAGAACCATTCACTCCATCTTAGTAGCTGTTGATGTGGGACCACCTTCTGCTTGAACTGTAACATCTTGGGAAATGAAGACATATCCATTTCTATACGAAACTTGTGTCCTATCAGATGGAATTCAAATTTCTCGATAGCCCTTTTGACTGCTAAAATCTCTTTGAATGTTGAGTGATAGTGTTGCTCTGAATCTTTGAAACGACCACTCTTGTAACCACATATTTGTCTTTTCCCATCCATCTCTTCAAACAGTATTGCTCCCCAATACTTATCGCTAGCGTCTGTCTGTAGAATACGCATGCCTGAGGAAGGAATCTTTAGAGGGGGCAGCTTTTGCACTTCTGCTTTTAGACTTTTGATTGCTTCARTTTGTCGTGATGTCCACAGAGGAGGGTTCTTCGACAGCATTTTCTGTAGAGGTCTCGTCATTCTGGAAAGGTGTGGGATGAAGTCTCCGACATAATTGATTACACCAAGAAATTGTTGAATTTGTCGCCTTGTAAGATTTTCATCGGGAAAATCTAGAAGCTCTGTAGCTAAATGGGCTTGTGGGATGAAACTTCCTTCTTTGATATGCATACCCAGAAAATCAATGTTGGGCTGGGCTATTATCATCTTTCTGGCCGATAGCATGATTCCGCTTTTCTTGACAATGTCTTGAAACTGTTGTAGCGCCTGAATATGGTCTTCTTCATTCTTCGAGAATATGAGTATGTCGTCAATGTATATAAGAGCTGTATGTAGCAGTGGCTCGAATATACGTAACATCGCTTGTTGAAATAGTGATGGCGCCGTCTTGAGACCAAAGGGTAAGACATTCCATTGAAGATGTCTATTTGGAAGGCAGAATGCAGTTTTGTACCTTTCTTCAGGGTGAACTCCTAGTTGCCAAAATCCTGATTTCAGATCAAACTTCGAAAATAATTTTGCACCTTCGAGATGTTGAAGTAGCGCTCTTTTATTTGGTAGTGGAAACTTGACGTCTTGCAGATATTGGTTTAATGGCTTGTAGTCAATAACCAATCTGAGTTTTCCTCTTGCTTGTTCTGCCCGATTATTGACATAGAACGCTTTGCATGCCCATGGAGAATTTGTTCTTGAGATGATACCTTGGTCCATCAATTGATTGCATTCTTCATTTGCCTTCTGCAACAATGTTGGAGGCATTCCTGCATGGCTTGCCTTTGTCGGTGTTGTGTGTACGTCTTCCTTGAACGGTAGGGATACGAAGAAGTCTGA
Arabidopsis halleri (v2.2)
ID:
FJVB01000010.1_LTR-Caulimovirus_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1806Start:
1273716End:
1275521Strand:
->FJVB01000010.1_LTR-Caulimovirus_7
TTCGCAATATCCGGTTTCTTTTCATCTTGAACCGACTCATGGCTTGATGAGGATGCTAGACTTGGCTTCTTGGATGGATTAACTTGAAATTCAGAATCCTTGTGACGCCTTGGTTTAGTTCTTGCCACTCTTGTTTTAAAATTGCTGATTGAAGTTGTRCCAAACCGAGATGTAAAAGCTTCATCAGAGGATAGAAATCCAGGTAYAGGCTGTTTTGGTTTTGGATCTTGATATCCAGACAAAAAYCCTGGGGAATACGATTCTTGAKATGTGGGTAATCCAGATGACATATAATCAAAAGGATTATACACATTCACTCGCCTCTGATTTTGGACTAGACTGTCTAGGCTCCTTTGAAGGTCTTTGAGTTGATATTTGAGATTGGTTTGTTCAGCTTCTTTACTTCTGAACTGAGTTGTATCAACCTTCATTTGTTTTGCCATAGCCATCATCTCATGGTGCAAGTTGCTAAGTCTCTGTTGAATCTCCGATATAGCTCCTTGCAGACTATTAAATCTTCTRTTGTTGTTTTCCGACATTTGATCAACCTTGTGGCTAATAGTTGACAATAATTGATTCTGGACAAAGGCATTTTCTGTTTGCCAGTTGAGAACCTTTTCTGCTTGGCTTAATTCGTCGGGTCCAGAAGAGTTGATGTTGTTAGGAATGATCTTTGGTGTGTGCACAATATTGTCCTTGACAAAGTCTTTTGGTGGAGGAAAATCCATCTTGATCATCATGATTTGCTGGTTTGATTCGTCTTCCTTTGTTGAATACTCGACGATGAAGTYGTAGTTGTCGTCACCAAGTGGACCTACTGTAGAATCTCCTTCAAGGTAGCGTCTGTATAGTGGATCCTTCTTTTTCCTTCGTCTTCTTCGCTTTTCTTCATCCGATTCATAAGAATCTTCTAAACACGCGGTGCATGAGCAGACATCGAAGTAACAATGTCCGTTCTCATCTTTGAATGGATATACAACAGTTCCATTCCGACCAAAAGCGGTTGGTTGAAGATCTTTCTTCTGTACTGGCTCATAGAACTCTTGCTCCTCAATTTGGATGGTGAATTGAGTAAAGAGTTTCTTTTGAAAAGATGATCTTGGCTTTTCGAACTTTATTTCTGTGGTTCCATCGYTTCTAGAGTGAAAGCTAACCTCAGATGACTGGATCGGCGCTTGAGATGCTTGATGTATCTTCTCATAGCTTGTTACCCATGACTCCGGCAGTTGTCGCAGTAGTTCTTCTCGAGATATCTGTCTTGGGATTTGAATAGAGTTGGGTGCTTGTGACGCCGATGTGACTTCAAGATATAAMGCYTCGTCAGATGCTGGTAATGCAAGATCAAGAGCATGATCTTGAATTCTGTATACAATCTGATGATGTAGAGTTGCTGCCACACTTTCGTCTTGCATAGGTGCTCCGATCAGTTGTAGTTGRACCTTGAGCGCCTTTAGGAGATTTGGATCTTGCAGTGAAACATTGAAGTTTGGAAACAGTGTTATAAATACTGTTCCTGCGTTCAACGTTGTTTGTACWGTTCCGATGCAAGCTTGTTGATAAGATTTGAGCCTTGAGTCAAGCAAAGCTATCCGTGCYACAACTGGTAAACYTTTTCGAGCATGTAAGGTTAAACCAATTCTTACTACGCCAAAGTGTAGATGAGTATAGCCTTGCTGCTGCCACAGCCTTGGTAAATGCTCCGGAATATTTAGCGATATGAATTGTTCTTCTTCGGTGGCTGGAACTTGGCATGATGAAAACTTGCTGGATTGTACGAACTCTAATACTCGTCGGCTGGAAGATGGC
Arabidopsis halleri (v2.2)
ID:
FJVB01000010.1_LTR-Caulimovirus_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
290Start:
1275522End:
1275811Strand:
->FJVB01000010.1_LTR-Caulimovirus_8
CTGATGAGCTCACGAACACCCTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAGGGATTAACCAACGGGAGGGTTGTTTCCGGCAGTTGATCTCCGGGAACATATTCGATCTCATACAAGGAATTTATTTTAGAAARGGAATTATTTCTTTGGATTTTTGGTAAAGTAGAGATAGCAAACTGAGAATCTATTGAAGGATTTAACTGAGGAGATTTTGAAGGCTTTGAAAGAGACATGATTGAGAGTTTGTTTTCCAGAACATTCAAAACGATCAGNTGTAA
Arabidopsis halleri (v2.2)
ID:
FJVB01000010.1_LTR-Caulimovirus_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
186Start:
1275807End:
1275992Strand:
->FJVB01000010.1_LTR-Caulimovirus_9
TGTAAGGTTAAACCAATTCTTACTACGCCAAAGTGTAGATGAGTATAGCCTTGCTGCTGCCACAGCCTTGGTAAATGCTCCGGAATATTTAGCGATATGAATTGTTCTTCTTCGGTGGCTGGAACTTGGCATGATGAAAACTTGCTGGATTGTACGAACTCCAATACTCGTCGGCTGGAAGATGGC
Arabidopsis halleri (v2.2)
ID:
FJVB01000010.1_LTR-Caulimovirus_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
374Start:
1275993End:
1276366Strand:
->FJVB01000010.1_LTR-Caulimovirus_10
CTGATGAGCTCACGAACACCCTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAGGGATTAATCAACGGGAGGGTTGTTTCCGGCAATTGATCTCCGGGAACATATTCGATCTCATATAAGGAATTTATTTTAGAAAGGGAATTATTTTTTTGGATTTTTGGTAAAGTAGAGATAGCAAACTGAGAATCTATCGAAGGATTTAACTGAGGAGATTTTGAAGGCTTTGAAAGAGACATGTTTGAGAGTTTGTTTTCCAGAACATTCAAAACAATCAGTCATAAACAATGATTCACTCTATCTTAACACAGTTTTGGCTCTGATACCATAATCTTAAGGCGAGCACGAGCGGAGGGTCGTGTTGACTA
Arabidopsis halleri (v2.2)
ID:
FJVB01000015.1_LTR-Caulimovirus_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
385Start:
264453End:
264837Strand:
+>FJVB01000015.1_LTR-Caulimovirus_11
TCGTCTAGACTTAGTCAACACGACCCTCCGCTCGTGCTCACCTTAAGACTATGGTATTAGAGCCAAAACTGTGTTAAGATAGAGTGAATCATTGTTTATGACTGATTGTTTTGAATGTTCTGGAAAACAAACTCTCAAACATGTCTCTTTCAAAACCTTCAAAATCTCCTCAGTTAAATCCTTCGATAGATTCTCAGTTTGCTATCTCTACTTTACCAAAAATCCAAAGAAATAATTCCCTTTCTAAAATAAATTCCTTGTATGAGATCGAATATGTTCCCGGAGATCAATTGCCGGAAACAACCCTCCCGTTGGTTAATCCCTATGAATACTTTGCTAAAAAGCCTAGTGCTTTTTCAGTAAAGGGTGTTCGTGAGCTCATCAG
Arabidopsis halleri (v2.2)
ID:
FJVB01000015.1_LTR-Caulimovirus_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
473Start:
264838End:
265310Strand:
+>FJVB01000015.1_LTR-Caulimovirus_12
GCCATCATCCAGCCGACGAGTATTGGAGTTCGTACAATCCAGCAAGTTTTCATCATGCCAAGTTCCAGCCACCGAAGAAGAACAATTCATATCGCTAAATATTCCAGAGCATTTACCAAGGCTGTGGCAGCAGCAAGGCTATACTCATCTACACTTTGGCGTAGTAAGAATTGGTTTAACCTTACATGCTCGAAAAGGTTTACCAGTTGTRGCACGGATAGCTTTGCTTGACTCAAGGCTCAAATCTTATCAACAAGCTTGCATCGGAACAGTACAAACAACGTTGAACGCAGGAACAATATTTATAACACTGTTTCCAAACTTCAATGTTTCACTGCAAGATCCAAATCTCCTAAAGGCGCTCAAGGTCCAACTACAACTGATCGGAGCACCTATGCAAGACGAAAGTGTGGCAGCAACTATACATCATCAGATTGTATACAGAATTCAAGATCATGCTCTTGATCTTGCAT
Arabidopsis halleri (v2.2)
ID:
FJVB01000015.1_LTR-Caulimovirus_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1940Start:
265884End:
267823Strand:
+>FJVB01000015.1_LTR-Caulimovirus_13
TTCCTAACAACATCAACTCTTCTGGACCCGACGAATTAAGCCAAGCAGAAAAGGTTCTCAACTGGCAAACAGAAAATGCCTTTGTTCAGAATCAATTATTGTCAACTATTAGCCACAAGGTTGATCAAATGTCGGAAAATAACAACAGAAGATTTAATAGTCTGCAAGGAGCTATATCGGAGATTCAACAGAGACTTAGCAACTTGCACCATGAGATGATGGCCATGGCAAAACAAATGAAGGTTGATACAACTCAGTTCAGGAGTAAAGAAGCTGAACAAACCAATCTCAAATATCAACTCAAAGACCTTCAAAGGAGCCTAGACAGTCTAGTCCAGAATCAGAGGCGAGTGAATGTGTATAATCCTTTTGATTATATGTCATCTGGATTACCCACATATCAAGAATCGTATTCCCCAGGGTTTTTGTCTGGTTATCAAGATCCAAAACCAAAACAGCCTGTACCTGGATTTTTATCCTCTGATGAAGCTTTTACATCTCGGTTTGGTACAACTTCAATCAGCAATTTTAAAACAAGAGTGGCAAGAGCTAAACCAAGGCGTCAAAAGGATTCTGAATTTCAAGTTAATCCATCCAAGAAGCCAAGTCTAGCATCCTCATCAAGCCATGAGTCGGTTCAAGATGAAAAGAAAGAGGATATTGCAAAGAAAGAAGATATTGTGATGATCGAATTCTCAATGACTAGTTTGCTAGACAATCTTGCGAAGACATCTGACGACGAAAGACGAGAATTGCAAATTGAATCAACAGAGCAGCAGCCACAACCAATCATTACAATAAATCACATTTCAGCTCTTTCAGATACAACCTCTTCCGTCAACGAATCAGAAACAAATGAATCTCTTCCCAATCAGTTTGCGATAGGAGATGAGCCGCATATTCCAAAAGAAGAACCAATCTATGAAGTAGCTTCAAGTGACGAAGAGATGGGCTATGAAACTCAAGGTGTACCWAAGAAGCAGTTTGCATCAAAGATAATGGTGTTCACATTTGATGACATTCCTTTCGAAAAATGGAATAGTCGTCTTGACGAATTCCATGCGTGGATGACCTCCGAAGCRATTACGTCCCCAACAGAGGTGGTGATACAACAATTCACATCAAGACTTTCTGGCGCATTAAAAGAATGGTGGAATTCGCTTGGAGAATATCGACAGCAGCAAGTATATCAGACAACGATACCTCTACTTCTGGGAGAAATACATAGAGAATTCGTTGGCACCCCAAGTATATTAAAAGAACAACTACAAGAAGAGTTCTACACAGCAAAGTGTTGTTCCTTGAAGAAGAGGGATTTAGCAAAGCATTTCGAGCGACAAACTCGAAGGTATTACGCTCTCAATGGTTTAAACAATCCAAGCCTGAAGCAAGTATATCTCTCATCAATAGATGACTACTTGGGTCAACAAACAAAGATGTATCTCAGAGATCAAGGACAGACAATAGAAGAAATCTCGATTGGGCAAATCCAGCAGAACGTGTTCAGAACTCTTGACAAGCTATGTAAGCAGAARGAGTTTTGGTCAGAGTTTATAGACAAATCAAAGCACCTTTCGAAGATATGTGCTCGTCCGGATCTATTCATCAAATGTTCGAAAAAGGAAAAATGGTTCGTGTGAAGATCAAGGAAAATTCCGAAGAAAATCCAAGAAGTCATTCTTAAAGTCGAAGTATTTCAACAAGAATAAAAGCAAGCGATTCTTCAGAAAGAAGAAAAGTTTCAAGAAAACTTCGAGATGCTTTCTATGCCGAAAGACGGGGCACTTTGCAAAAGACTGTCCGAACAAGTCTAAAAAGAAGAAGCAATATCTCATTCACTCGATATCAAAGATAGCTCCAGATCTTGATATCGATAACCACGATCTCGAGTCGATACTATCTTACGATAGTGATGAGAATGATGCTATATGCAGTTATTC
Arabidopsis halleri (v2.2)
ID:
FJVB01000015.1_LTR-Caulimovirus_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
324Start:
267966End:
268289Strand:
+>FJVB01000015.1_LTR-Caulimovirus_14
GCATCAAGAAGAAGAACTTCAGTCACCGCATCTACCAGTAACCATCTTTGATCCCTCAAGAAAGGAGAAGCCAGTGCATGCAATCGCGTTCTTTGACACAGGAGCTCATACAACAATCATGAATCCAAAGATTCTCTCGAGTACCATGTGGATGCCTCATCAACAAGATTTCAGAGTCGCAAACTCTGGATCCCTAACGGTTAAGCTGAAATCAAAACCAATCACAATAGAGCTTTTTCCAGGATGTCAAGTTACTAAGGAAGTACTAGGATCATCCGTACCTGGTAAAGATATAATCCTTGGATGGGATACATATTCCAGGTA
Arabidopsis halleri (v2.2)
ID:
FJVB01000033.1_LTR-Caulimovirus_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
334Start:
1139404End:
1139737Strand:
+>FJVB01000033.1_LTR-Caulimovirus_15
TCAGAGCCAAAACTGTGTTTAGATAAGATAGAGTGAATCATTGTTTATGACTGATCGTTTTGAATGTTCTGGAAAACAAACTCTCAATCATGTCTCTTTCAAAGCCTTCAAAATCTCCTCAGTTAAATCCTTCGATAGATTCTCARTTTGCTATCTCTACTTTACCAAAAATCCAAARAAATAATTCCCTTTCTAAAATAAATTCCTTGTATGAGATCGAATATGTTCCCGGAGATCAATTACCGGAAACAACCCTCCCGTTGGTTAATCCCTATGAATACTTTGCTAAAAGGCCTAGTGCTTTTTCAGTAAAGGGTGTTCGTGAGCTCATCAG
Arabidopsis halleri (v2.2)
ID:
FJVB01000033.1_LTR-Caulimovirus_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
99Start:
1139738End:
1139836Strand:
+>FJVB01000033.1_LTR-Caulimovirus_16
GCCATCTTCCAGCCGACGAGTATTGGAGTTCGTACAATCCAGCAAGTTTTCATCATGTCAAGTTCCAGCTACCGAAGAAGAACAATTCATCTCGCTAAA
Arabidopsis halleri (v2.2)
ID:
FJVB01000033.1_LTR-Caulimovirus_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
292Start:
1145787End:
1146078Strand:
+>FJVB01000033.1_LTR-Caulimovirus_17
TCTCTAAGTTTTCCAGACTTCCTAACTTCTTCATAAACCTTGTTTCTTTCTACTCTAAACACAGTCGCGATTCTGGTTTCTCTTCTTAAGGTTAGCATAAGTGGTCCGTCAATACGACGGTCAAACACGGCAGTCAATAGTACTCGCCGGGGTTCACAGTTCCTAATAGTAGGTTGAGCAACACAGTAGGCAATGAGGCCCGAACCGCTCCCTTTACCTGGAATATGAACCCTTGCTTGTCGACACGACTGTCGTCTAGACTTAGTCAACACGACCCTCCGCTCGTGCTAAC
Arabidopsis halleri (v2.2)
ID:
FJVB01000039.1_LTR-Caulimovirus_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
2666Start:
397775End:
400440Strand:
->FJVB01000039.1_LTR-Caulimovirus_18
TGCAAAGCTTGTCAAGAGTTCTGAACACGTTCTGCTGGATCTGCCCAATTGAGATTTCTTCTATTGTCTGTCCTTGATCTCTGAGATACAKCTTTGTTTGTTGACCCAAGTAGTCATCTATTGATGAGAGATATACTTGCTTCAGGCTTGGATTGTTTARACCATTGAGAGCATAATACCTTCGAGTTTGTCGCTCAAAATGCTTTGCTAAATCTCTCTTCTTCAATGAACAACATTTTGCTGTGTAGAACTCTTCTTGTAGTTGTTCTTTTAAAAGACTTGGGGTGCCAACAAATTCTCTATGTATTTCTCCCAGAAGTAGAGGTATCGTTGTCTGATATACCTGCTGCTGTCGATATTCTCCAAGCGAATTCCACCATTCTTTTAATGCGCCTGAAAGTCTTGATGTAAATTGTTGTATCACCACATCTGTTGGGGACGTAATCGCTTCGGAGGTCATCCACGCATGGAATTCATCAAGACGACTATTCCATTTTTCAAAAGGAATATCATCAAATGTAAACACCATTATTTTTGATGCAAACTGCTTCTTTTTTACACCTTGAGTTTCATAGCCCATCTCTTCGTCACTTGAAACTACTTCATAGATTGGTTCTTCTTTTGGAATTTGCGGCTCATCTCCTATCGCAAACTGATTTGGAAGAGATTCATCTGTTTCTGATTCGTTGACGGAAGAGGTTGCATCTGAAAGAGCTGAAATGTGATTTATTGTAACGATTGGTTGTAGCTGCTGCTCTGTTGATTGAATTTGCAATTCTCGTCTTTCGTCGTCAGATGTCTTCGCAAGATTGTCTAGCAAACTAGTCATTGAGAATTCGATCATCCCAATATCTTCCTTCTTCGCAATATCCTCTTTCTTTTCATCTTGAACCGACTCATGGCTTGATGAGGATGCTAGACTTGGCTTCTTGGATGGATTAACTTGAAATTCAGAATCCTTTTGACGCCTTGGTTTAGTTCTTGCCACTCTTGTTTTAAAATTRCTGATTGAWGTTGTACCAAACCKAGATGTAAAAGCTTCATCAGAGGATAAAAATCCAGGTACAGGCTGTTTCGGTTTCGGATCTTGATAACCAGACAAAAACCCTGGGGAATACGATTCTTGATATGTGGGTAATCCAGATGACATATAATCAAAAGGATTATACACATTCACTCGCCTCTGATTCTGGACTAGACTGTCTAGGCTCCTTTGAAGGTCTTTGAGTTGATATTTGAGATTGGTTTGTTCAGCTTCTTTACTTCTGAACTGAGTTGTATCAACCTTCATTTGTTTTGCCATAGCCATCATCTCATAGTGCAAGTTGCTAAGTCTCTGTTGAATCTTCGATATAGCTCCTTGCAGACTATTAAATCTTCTGTTGTTGTTTTCCGACATTTGATCAACCTTGTGGCTAATAGTTGACAATAATTGATTCTGAACAAAGGCATTTTCTGTTTGCCAGTTGAGAACCTTTTCTGCTTGGCTTAATTCGTCGGGTCCAGAAGAGTTGATGTTGTTAGGAACGATCTTTGGTGTGTGCACAACATTGTCCTTGACAAAGTCTTTTGGTGGAGGAAAATCCATCTTGATCATCATGATTTGCTGGTTGGATTCGTCCTCCTTTGTTGAATACTCGACGATGAAGTCGTAGTTGTCGTCACCAAGTGGACCTACTGTAGGATCTCCTTCAAGGTAGCGTCTGTAGAGTGGATCCTTCTTTTACCTTCGTCTTCTTCGCTTTTCTTCATCCGATTCATAAGAATCTTCTAAACACGCGGTGCATGAGCAGACATCGAAGTAACAATGTCCGTTCTCATCTTTGAATGGATATACAACAGTTCCATTCYGACCAAAAGCGATTGGTTGAAGATCTTTCTTCTTTACTGGCTCATAGAACTCTTGCTCCTCAATTTGGATAGTGAATTGAGTAAAGAGTTTCTTTTGAAAAGATGATCTTGGCTTTTCGAACTTWATCTCTGTGGTTCCATCGYTTCTAGAGTGAAAGCTWACYTYAGATGACTGGATCGGCGCTTGRGATGCTTGATGTATCTTCTCATAGCTTGTTACCCATGACTCCGGCAGTTTTCGCAGTAGTTCTTCTCGAGATATCTGTCTTGGGATTTGAATAGAGTTGGGTGCTTGTGACGCCGATGTGACTTCAAGATATAAAGCCTCGTCAGATGCTGGTAATGCAAGATCAAGAGCATGATCTTGAATTCTGTATACAATCTGATGATGTAGAGTTGCTGCCACACTTTCGTCCTGCATAGGTGCTCCGATTAGTTGTAATTGGACYTTAAGCGCCTTTAGGAGATTTGGATCTTGCAGTGAGRCATTGAAGTTTGGAAACAGTGTTATAAATACTGWTCCTGCGTTCAACGTTGTTTGTACTGTTCCGATGCAAGCTTGTTGATAAGATTTGAGCCTTGAGTCAAGCAAAGCTATCCGTGCCACAACCGGTAAACCTTTTCGAGCATGTAAGGTTAAACCAATTCTTACTACGCCAAAGTGCAGATGAGTATAGCCCTGTTGTTGCCATAGCCTTGGTAGATGCTCCGGAATATTTAGCGAGATGAATTGTTCTTCTTCGGTGGCTGGAACTTGGCATGATGAAAACTTGCTGGATTGTACGAATTCCAATACTCGTCGGCTGGAAGATGGC
Arabidopsis halleri (v2.2)
ID:
FJVB01000039.1_LTR-Caulimovirus_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
376Start:
400441End:
400816Strand:
->FJVB01000039.1_LTR-Caulimovirus_19
CTGATGAGTTCACGAACACCTTTTACTGAAAAAGCACTAGGCTTTTTAGTAAAGTATTCATAAGGATTAACCAACGGGAGGGTTGTTTCCGGTAATTGATCTCCGGGAACATATTCGATCTCATACAAGGAATTTATTTTAGAAAGGGAATTATTTCTTTGGATTTTTGGTAAAGTAGAGATAGCAAACTNGAAGGATTTAACTGAGGAGATTTTGAAGGCTTTGAAAGAGACATGATTGAGAGTTTGTTTTCCAGAACATTCAAAACGATCAGTCATAAACAATGATTCACTCTATCTTAACACAGTTTTGGCTCTGATACCATAATCTTAAGGCGAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGAC
Arabidopsis halleri (v2.2)
ID:
FJVB01000040.1_LTR-Caulimovirus_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
205Start:
475583End:
475787Strand:
+>FJVB01000040.1_LTR-Caulimovirus_20
CATGGTTGGAGTATTCAACAAAGGAGGACGAATCAAACCAGCAAATCATGATGATCAAGATGGATTTTCCTCCACCAAAAGACTTTGTCAAGGACAATATTGTGCACACACCAAAGATCATTCCTAACAACATCAACTCTTCTGGACCCGACGAATTAAGCCAAGCAGAAAAGGTTCTCAACTGGCAAACAGAAAATGCCTTTGT