ID Class Order Superfamily Length Start End Strand View
FJVB01000002.1_LTR-Cassandra_1 RetrotransposonsLTRLTR-Cassandra23219063451906576+
FJVB01000005.1_LTR-Cassandra_2 RetrotransposonsLTRLTR-Cassandra36213169961317357-
FJVB01000005.1_LTR-Cassandra_3 RetrotransposonsLTRLTR-Cassandra35913192261319584+
FJVB01000007.1_LTR-Cassandra_4 RetrotransposonsLTRLTR-Cassandra142781379781520+
FJVB01000011.1_LTR-Cassandra_5 RetrotransposonsLTRLTR-Cassandra24010662331066472+
FJVB01000013.1_LTR-Cassandra_6 RetrotransposonsLTRLTR-Cassandra356776465776820-
FJVB01000013.1_LTR-Cassandra_7 RetrotransposonsLTRLTR-Cassandra112776823776934-
FJVB01000013.1_LTR-Cassandra_8 RetrotransposonsLTRLTR-Cassandra356776935777290-
FJVB01000013.1_LTR-Cassandra_9 RetrotransposonsLTRLTR-Cassandra36215695441569905+
FJVB01000013.1_LTR-Cassandra_10 RetrotransposonsLTRLTR-Cassandra36016186161618975+
FJVB01000013.1_LTR-Cassandra_11 RetrotransposonsLTRLTR-Cassandra35516321471632501-
FJVB01000015.1_LTR-Cassandra_12 RetrotransposonsLTRLTR-Cassandra19312483071248499-
FJVB01000018.1_LTR-Cassandra_13 RetrotransposonsLTRLTR-Cassandra305363592363896+
FJVB01000018.1_LTR-Cassandra_14 RetrotransposonsLTRLTR-Cassandra111363897364007+
FJVB01000018.1_LTR-Cassandra_15 RetrotransposonsLTRLTR-Cassandra332364008364339+
FJVB01000018.1_LTR-Cassandra_16 RetrotransposonsLTRLTR-Cassandra294374920375213-
FJVB01000018.1_LTR-Cassandra_17 RetrotransposonsLTRLTR-Cassandra359395340395698-
FJVB01000018.1_LTR-Cassandra_18 RetrotransposonsLTRLTR-Cassandra110395699395808-
FJVB01000018.1_LTR-Cassandra_19 RetrotransposonsLTRLTR-Cassandra161395811395971-
FJVB01000018.1_LTR-Cassandra_20 RetrotransposonsLTRLTR-Cassandra225397373397597-

< 1 2 3 4 5 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000002.1_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

232

Start:

1906345  

End:

1906576

Strand:

+

>FJVB01000002.1_LTR-Cassandra_1

AACACTCCGAATTCTGGATATATGGCAGTGCATGGTGAGCATTTAAAAAATTTGTTTTGGCTTTTTATATTGTCAATGTGCACTTATTTTTTCGATTAAACATCATATCAAAACTTCAGAGTAGTTAATCGTGTTTGCACTTGAGCAATTTTAAAATGGATGATTTATCCTTTATCGTATGAGTGAAGACATATTTAAAAAATTATGTGGTGATTTATAGAATCAATAAAAA

Arabidopsis halleri (v2.2)

ID:

FJVB01000005.1_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

1316996  

End:

1317357

Strand:

-

>FJVB01000005.1_LTR-Cassandra_2

TATAATGCTCCGACCGCCACACCTCTCTTAATGGGCCCCACATCCTCTCTCAGGCCCATGGGCCCACCCGTGTCCGACGGTCGGTCCACTACGTCTGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGATTTGTCCTCGCTCACACAGTTCCGACAATCACTTCGCGGAAGGTCACCCATCCTGAAATTGCTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTCTCAAGACAGTTGACCGAAAAGATAAGTGCATTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCATCATATTCTTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000005.1_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

1319226  

End:

1319584

Strand:

+

>FJVB01000005.1_LTR-Cassandra_3

TGTAATACCCCGGTTTCAGGAATATGGTGGTGCATGCGGCGATGTTTAAAAGAATTGATTTGGCCACCTATGTCTCCAAAGTGCACTTATCTTTTCGGTGAAACGTCCTGAAAGAGCGCCACAGTTAAGCGTGCTAGGGCTGGAGCAATTTCAGGATAGGTGACCTTCCGAGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACGGAGAAAGATCATGTGGTGATTAGTAGGGTAGATAAATAAGTTTTTAAAGCCTCTCGGACGTAGCGGACCGGCCGTCAGACAGGGGTGGGACCCACGTACCCGAGAGAGGACGTAGATGCTCACTAGTAGGGGCGGTCGGGGCGTCACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000007.1_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

142

Start:

781379  

End:

781520

Strand:

+

>FJVB01000007.1_LTR-Cassandra_4

GAGCAGTGTAAAGATGATTGATATGCTAGAAAGTAGTTTTCAATACTATATGGATGGAGACAAAATATGAAAAATAGTTAGTGGTGATTTGCAGGATTTTAATAGATAGTCTTTCCATTTTTCGAAATAACGTACCAACCAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000011.1_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

240

Start:

1066233  

End:

1066472

Strand:

+

>FJVB01000011.1_LTR-Cassandra_5

TGTAACACCCCGGTTTCAGGAATATGGTGGTGTATGCGGAGAGATTTAAGAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAACGTCCTGAGAGAACTCCACAGCTAAGCGTGCTTGAGCTGGATTAGTTTCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGT

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

776465  

End:

776820

Strand:

-

>FJVB01000013.1_LTR-Cassandra_6

GTAACGCCCCGACCGCCATTTCTCTTAATGGGCCCTATGTCCTCTCTCGGTCTGTAGGCCCACCATCTTCCGACGGCCGGTCCGCTACGTCTGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACACGATCTTTTCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTTCCGGAAGGTCACCCATCCTGAAACTATTCCAGCCCAAGCACGATTAATTGTGGAGTTCTCTCTTGATAGTTGACCAAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCGGAGTGTTA

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

776823  

End:

776934

Strand:

-

>FJVB01000013.1_LTR-Cassandra_7

ATTCACCCCAACTAACAGATCGCAACGTCCTCGTTGCTCACCAAGACCGTCACCCTCTACGGTGTGAGCCTTCTTAGCTCCATACTCGTCTGGATTCGGTTCTGATACCACT

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

776935  

End:

777290

Strand:

-

>FJVB01000013.1_LTR-Cassandra_8

TGTAACGCTCCGACCGTCCCTACCAGTGGACCTCACGTCCTCTCTCGGGTCCATGGACCCACCCCTGTTCGACGGCCGGTCCGCTATGTTCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATTTTTCTCTTTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTTCCGGAAAGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACACTTAATTGTGGAGTTCTCTCAGGACAGTTAACCGAAAAGATAAGTGTACTTTAGTGACATATGTGGCCAAATCAATTCTTTTAAACATCTCTGCATGCACCACCATATTTCTGAAACCGAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

1569544  

End:

1569905

Strand:

+

>FJVB01000013.1_LTR-Cassandra_9

TGTAACACCCCGGATTCAAGAATATGGTGGTGCATGCAGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCATCAAAGTGAACTTATCTTTTCTGTCAACTGTCATCAGAGAACTCCACAGTTAAGCGTGCTTGATGAGATGGAGCAATTTTAGAATGGGTGACCTTCCGGAAAGTGATTGTCGGAAATGTATGAGTGAGGACAAAACACAGGAAAAGATCACGTTGTGATTTGTAGGGTCGGTAAAAAAGTCTTTAAAGCCTCCCGGACATAGCGGACCGGCCTTCAGACATGAGTGGGGCCCACGAACCCGAGAAAGGACATGGGTGCTCACTGGTAGTGACGGTCGAGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

1618616  

End:

1618975

Strand:

+

>FJVB01000013.1_LTR-Cassandra_10

TGTAACACCCCGGTTTCAGGAATATGGTGGTGCATGCGGAGAAGTTTAAAAGAATTGATTTGGCCACATATGTCACCAAAATGCACTTATCTTTTCGATCAACTGTCCAGAGAGAACTCCACAATTAAGGGTGCTTGAACTGGAACAATTTCATGATGGGTGACCTTCCGGGAAGTGATTGTCAGAACTGTGTAAGTGAGGACAAAACACAGAGAAAGATCATGTGGTAATTTGTAGGGTCGGTAAACAAATATTTAAAAACCTCCCGGATATAGCGAACCGACCGTCGGAAGATGGTGAGCCCACAGACCGAAAGAGGACATGGGACCTATTAAGAAAAATGACAATCGGGTCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000013.1_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

1632147  

End:

1632501

Strand:

-

>FJVB01000013.1_LTR-Cassandra_11

TGTAACACCTCGACTAGTCCTATCAGTGATAATCCACGTCTATTCGTGGACCTGTGGGCTCCATCGTTGTCCAACGGTCGGTCTGTTACGTCCGAGAGGCTTTAAAGACTAATTTACCGATCCTACAAATCACCACATAATCTTTCACAATGTTTTGTCCTTACTCATACGGTTTATGACAATCACTTTCCGGAAGGTCATCCATTCTGAAATCCACCTCAACACGCTTAACTGTAGAGTTTTCTTAGAACGTTTGACCGAAAAGATAGGTGCATTTTGATAATATAAATGACCAAATCAATTCTTTTAAACATCTCCGCATGTACCACCATATTCCTGAAATCGAAATGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000015.1_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

193

Start:

1248307  

End:

1248499

Strand:

-

>FJVB01000015.1_LTR-Cassandra_12

TTTTTCCTCATTGTGTCCTCGCTCACATGATACCGACAAAGTCACTAGATCATTCATCATACAATTGTTTCTTCAACTTTGAAATTCTCTCGCAATGAATTACATAAAAGATACATGGTCATAATATATACGTAGTCAAATCAATTTTTTTAGTTTCTCTTCATGCACCACTTTTAGAAATCGGGATATTGCA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

305

Start:

363592  

End:

363896

Strand:

+

>FJVB01000018.1_LTR-Cassandra_13

TGTAACACCCTAGTTTCAAGAATATGGTGGTGCATGCGGATAGATTTTAAAGAATTGATTTGACCACCTATGTCACAAAAGTGGAAGAATTCTACAGTTAAGCGTGCTTAAACTGGAGCAAGTGATTTTCGGAACTGTGTGAGTGAAGACAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCCTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCGTAAGCTGGTGGGCCCACAAGCCGAGAGAGAACGTGGGACCCATTAATAGAGATGGCAGTCGGGGCATTATA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

363897  

End:

364007

Strand:

+

>FJVB01000018.1_LTR-Cassandra_14

AGTGGTATCAGAGCCAAACCCAGACGTGTGTGGAGTCAAAGGACTCACACCATCGGGGGTGACGGTCTTGGTGCGCAACAAGGACGTTGCGATCTGTTAATAGGGGTGAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

364008  

End:

364339

Strand:

+

>FJVB01000018.1_LTR-Cassandra_15

TATAACACCCTGGTTTCATGAATATGGTGGTTCATGCAGAGATGTTTAAAAGAGTTGATTTGGCCACCTATGTCACCAAAGTACACTTATTTTTTCGGTCAACTGTCTTGAGAGAACTCCACAGTTAAGCGTGCTTGAGCTGGAGCAATTTGAGAATGGGTGACCTTCCGAGAAGTGATTGTCGGAACTGTGTGACTGAGTACAAAACACAGGAAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGTCTCCCAGATGTAGCGGACCGGCCGTCAGAAGCTGGTGGGCCCACAGACCGAGAGAGGACGTGGTGCCCATT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

294

Start:

374920  

End:

375213

Strand:

-

>FJVB01000018.1_LTR-Cassandra_16

AACGCCCCGACCGCCCCTATCAGTGAGCACTCCCATCTTCCTCGGGCCCGTGGGCTCTACCTCTGTCCGGCGGTCGGTCCGCTACGTTCGGGAGGTTTTAAAGACTTGTTACCGACCCTACAAGTCACCACATGGTCTTTCTCAGTGTTTTATCCTCACTCACCAATTCTGACAATCACTCCCAAAACCCATCCTGAAATTGCTCTAGCTCAAGCACCTTTAACTATGGAATGCTTTTAGGACAGTTGACCAAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAATCAATT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

395340  

End:

395698

Strand:

-

>FJVB01000018.1_LTR-Cassandra_17

TGTAATGCCCTGCCCGCCATCTCTCTTAATGGGCCCTACGTCCTCTCTCGGCCCGTGGGCCCACCATCTTCCGACGGCCGGTCCGCTACGTCTGGGAGGCTTTAAAGACTTGTTTACCAACCCTACAAATCACCGCATGATCCTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATTACTTTCCGGAAGGTCACCCATCCTGAAATTGCTCCAACTCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTGGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

395699  

End:

395808

Strand:

-

>FJVB01000018.1_LTR-Cassandra_18

ATTCACCCCCACTAACAGATCGCAACGTCCTCGTTGCGCACCAAGACCGTCACCCCTGACGGTGCGAGCCCTCTTGATTCCACACTCGACTGGGTTCGGCTCTGATACCA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

161

Start:

395811  

End:

395971

Strand:

-

>FJVB01000018.1_LTR-Cassandra_19

TGTAACGCCCCGACCACCACACCTTTCTTAATGGCCCTCTCTCGGCCCGTGGCCGACCCGTGTTCGACGGCCAGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCATACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCAC

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

225

Start:

397373  

End:

397597

Strand:

-

>FJVB01000018.1_LTR-Cassandra_20

TCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCATGAAACTACTCCAGCCCAAGCACGCTTAACTGTGACGCTTAACTGTGACGCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGATATAGGTGGTCAAATCAATTCTTTTAAACCTCTCTGCATGCACCACCATATTCCTGAAACCAGGGTGTTACA