ID:

AA_C160459_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

227

Start:

831  

End:

1057

Strand:

+

>AA_C160459_LTR-Cassandra_1

TTTAAAGAGATGATGGTGCATGACAAGAAAACTTAAGCGAATTGAAAAGACTACCTATATCATCAAAGTGCATTTAGTTTTTTGGTCACACACCCTGAAGAACTCCACAATTAAGCGTATTTAAAGTGTAGTAATTCCAGGATGGATGACCTTATGAGAAATCAATTTCCAATATTGTGGGAATAAAGACTAAACAGGTGTTAAGTTCTCGTGGTGGTATGTAGTGT

ID:

AA_C171277_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

198

Start:

3697  

End:

3894

Strand:

+

>AA_C171277_LTR-Cassandra_2

TAACATCCCGAGTTCAGAAAAATGGTTGTGCATGCAAGAAATTGATTAGACTATCTATATCACTAATGCACTTAGCTTTCCGGCCACAAATCCTGTAAGAGTTAAGCGTGTTTGAGATGCATTAATCTGGGAAATCATATGTCATTTTCCAGTATCGTGTGAGTGAAGACAAAACACGTGTTAAACTTTCGTGGTGGT

ID:

AA_C184853_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

4624  

End:

4977

Strand:

+

>AA_C184853_LTR-Cassandra_3

CGAGTTCAAGAAGATGGTGCTAGATGGCGAGAAAACTTCAAAATAATTGATTAGATTACCTATATCACCAAAATACATTTAGCTTTTCGGTCACATTTAGCTGCAATATTTTTATACATTTAGCTTTTCGGTCACATTTAGCTGCAATAATTTTAGGATAGGTGACCTATTGCAAAGTCATTTTCCAATATCGTGAATGAAGACAAAATACGTGTTGAGTTTTCATGGTGGTGTGTAGGGTAGTCATCGAGTCAGTCAAGCTTCTTAGAACACCGACCGTCAGTTAGGGTGGGCCTGACCAGCCTTTTAAGGTTGAGAGAGATGGCCCATGGCAAGGGTGGTCGGGGCGTTATA

ID:

AA_C188135_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

321

Start:

8068  

End:

8388

Strand:

-

>AA_C188135_LTR-Cassandra_4

TCGCCCGTGCCATTGGGCCCATCTCTCCTGTCCCATTGGACAGTGGACACACTCTACCCCGGGAAACTTGAAAGATTTGACAACTGTCCCTACAGATCACCGAGATCTAACCACGCCTTTTGTTCTTACTCACACAATACTGGAAAATAACTTCTCAATATTCCCAGTAGGTCACCCATACTGAAACTATTGTACCCTAAGCACGCTTAACTGTGGAATTTTGACGAAATGTGGAAGACCTAAGTGTTGATGTAGGTAGCCTAATCAATTCTTTTAAGATTTCTCCTCATACACCACCATCTTCTGACTCGGGGTGTTACA

ID:

AA_C5213_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

104

Start:

2  

End:

105

Strand:

-

>AA_C5213_LTR-Cassandra_5

AGGTCACCCATCCTATTACTACTCCAGCCCGAGCACGCTTAACTGCAGAGTTTTGAAGTAGTGGTTGATCGAAAAGGTAAGTGTACTTTAGCGACATAGGTAGC

ID:

AA_C72451_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

147

Start:

1  

End:

147

Strand:

+

>AA_C72451_LTR-Cassandra_6

GCGTGGACTGTAGTAGTACTAGGATGGGTGACCTACCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACGCACAGGGAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTGAGCCTCAAAAAAATAATGCACC

ID:

AA_scaffold1051_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

144

Start:

12213  

End:

12356

Strand:

+

>AA_scaffold1051_LTR-Cassandra_7

TGTAGCACTCCTAGTTTAACAATATGGTGAGGTATGAAGAAAAAAACTTAAAAATAATTGATTAGACTACCTATATCATCTAAGTGCACTAAAACTTCCGGTTATACATCTAGTTAGAACTCCATAGTTAAGTATGATTGAGCT

ID:

AA_scaffold1075_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

301

Start:

58633  

End:

58933

Strand:

-

>AA_scaffold1075_LTR-Cassandra_8

CCCGGCCATCTTTGCCATGGGTCCACCATTCTCTTGATCCATCGGACTTACCCTATACGATGATCTATATATTCCTTTGTCAAGTTAGTAAGATTTAACGATTAATCCTACATACCACCACGAAAGTTTAATATGTGATATTGTTCTCACTCATACGATTCTAGAAAATTAATTTTGAATAGGTCATCCATTCTAAAATTAATCCACCTTAGACACATTTAATTATGAAGTTCTTACATGATGTGTGACCAAATAATTAAGTGCACTTTGGTGGTATAAATAATCTAATCAATTATTTTAA

ID:

AA_scaffold1124_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

216

Start:

133319  

End:

133534

Strand:

-

>AA_scaffold1124_LTR-Cassandra_9

ACCCTACAAACCACCACGAGAGTTTAACACGTGTTCTGTCCTCATTTACATGGTACTATAAAATGATTTCCCAATAGTTCATCTATCCTAATATTACTGCATCTCAAACACGTTTAACTATGGAGTTATGACGGAGTGTGTGACCGGAAACTTAATGCATTTTGGTGATATAAGTAGCTTAATCAATTTTTTTAAGTTTTCTCGTCAAGCACTACC

ID:

AA_scaffold1128_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

280

Start:

13862  

End:

14141

Strand:

-

>AA_scaffold1128_LTR-Cassandra_10

TGTTCGATGGTCAGTGCACTACTCCAAGAAATAAGAAAACTGTAATGACCATTTTTACATACCACCATAAGAGTTTAACACGTGTTTGTTTTCACTCACACTATACTAAAAAGGATCTTCCTTGTAAATTATCTATCATGAAATTACTATACCTCAAACACTTTTAACTATGAAATTCTTACATAATGTGTGACCGAAAAATTAAATACACTTTGCTGATATATGTAGTATAATTAATTCTTTTATTTCTTCTCGTCATGGGCCACCATCTCCTTGAAAC

ID:

AA_scaffold1128_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

168

Start:

14331  

End:

14498

Strand:

-

>AA_scaffold1128_LTR-Cassandra_11

AATGATTTTCTAGTAGGTCATCCATCATAAAGTAGTTGCATTTCAAACATGCTTAATTGTGGTATTCTGAGAGGATGTGTCACCAAAAAACTAAATGCATTTTGGTGATAAATATAATTTAAGTTTTATCTCCATGCACCACCATCTTCATGGACATTGAGTGTTACA

ID:

AA_scaffold1173_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

249215  

End:

249524

Strand:

+

>AA_scaffold1173_LTR-Cassandra_12

TCAAAGATATGGTGGTCATGACGAGAAAAAATTGATTAGACTATCTACATCAGAAAAGTGCATTTAGTTTTTTCGGTCACACAACCGGTTAGAACTCCACAGTTAAGCGTGTTTGACATGTAGTAATTTCGAGATAGAAAATCATTTTCCAGCATTGTGTGAGTGAAGAGAAAACATGTGTTAATCTTTCATGATGATATATAGGATCAATCATCAAATCTTCCAACTTTTTCAGACAAAGTGGACTCAATGAGTCGTAGATGGGCTAAAATAGAAGTGGGTCCATGGTAGGGACGGTTGAAGCGTTATA

ID:

AA_scaffold121_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

256

Start:

190469  

End:

190724

Strand:

-

>AA_scaffold121_LTR-Cassandra_13

AAGGCTCTGACCGTCTCTTCCATGGACCCATCTCTCCTAGCCCATTTATGGCTCATTCGGCACACCTTGTCTAACAGTCAACTATTTCTACAGACCACCTTGAGAGTTTAACATGTGTTTTGTTCTCACTCAAACGACACTAAAAAAATGACTACAATAGGTCACCCATCCTGAAACTTTTGAACCTCAAGCATGCTTAAATGTGGAAGTGTGAATGAAGAACTAAGTATACTTTGGTGATACAAGTACCTAATCA

ID:

AA_scaffold1346_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

185

Start:

53583  

End:

53767

Strand:

+

>AA_scaffold1346_LTR-Cassandra_14

ATGGTGGTGCATGACAAAAAAATCTTAAAAAAAAATAAATTACCTTTATCTCGAAAGTGTGTTAGATTTTCGACATTTATTTGTTCAGAATTCTACAATTAAACGTGATAGAGATATAATAATTTGAGTATATGTGACATATTGGAAACTTATTTTCAGTATCGTGTGAGTAATAACAAAACATG

ID:

AA_scaffold135_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

90

Start:

32328  

End:

32417

Strand:

-

>AA_scaffold135_LTR-Cassandra_15

TAAGTGCAGTTTGGTGATATAGGTAGTCTAATCAATTCTTTTAAACTTTTTCGCAATACACAAGTATCTTCCTGAACTCAAAATCTTACA

ID:

AA_scaffold135_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

36436  

End:

36542

Strand:

-

>AA_scaffold135_LTR-Cassandra_16

AATGACTTCCCAGTAGGTCACCCTATCTTGAAATTACTGCATATCAAGCACACTTAAATGTGGAATTCTAACGAAAAACTAACTTCATTTTGGTGATATATATAGCC

ID:

AA_scaffold1441_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

340

Start:

263224  

End:

263563

Strand:

+

>AA_scaffold1441_LTR-Cassandra_17

TGTAACACTCTATGTTCAAGAAAATGGTGGTACATAGCAAGAAAGATTACAAGAATTGAATAGGCTACCTATATAATCAAAGTGGATTTAGCTTTTCGGTCACATATTCGGTAAGAACTCCATAGTTAAGCGTGCTTGAGCTGCAGAAATTTCAGAATGGTGACTTACTAGAAAGTCATTTTCTAATATGAAGTGAGCGAGAACAAAACACGTGTTAAGCTCTCGTGGTGGTATGTAGGGTTAGTCGTTAGGTCTTTAACGTCGGATAGGGTGGGCCCGATGGGCCTTAAATGAGTCGGGAGAGAGGTGGATCCATAACAAAGGCGGTCGGGGTGTTATA

ID:

AA_scaffold157_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

174

Start:

37095  

End:

37268

Strand:

-

>AA_scaffold157_LTR-Cassandra_18

GAAAATAATCTTCCAATAGATCACCCATTCAGAAATCACTGCATCTCAAACACGTTTAACAGTGGAGTTTTAACATGATATGTGACCGAAAAACTAAGTGCACTTTAGTGATTTAAGTAGCCTAATCAATTCTTTCAAGTTTTCTCGCCATCTTCCTGAATTTGGGGTATTACA

ID:

AA_scaffold1661_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

132

Start:

9342  

End:

9473

Strand:

+

>AA_scaffold1661_LTR-Cassandra_19

CAGTTCCGGGAGATAGTGGTGTATCATGTATGACGAGAAAACTTAAACGAATTGATTAGACTATCTATATGACCAAAGTGTATAACTTTTCGGTCATACATCATACATCATGTCAGAACTCCACAATTAAAC

ID:

AA_scaffold1738_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

103

Start:

576730  

End:

576832

Strand:

-

>AA_scaffold1738_LTR-Cassandra_20

TAACCGAAAAGCTAAGTGCATTTTAGCGATACAAGTAGTCTAATCAATACTTTTAAGCTTTTTTCGCTATGCACCGCCATTTTCTTGAATTAGGATCGTTGCA