TBGR-Browse-Aal-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr1_Retroposon-L1-dep_1	Other	Retroposon	Retroposon-L1-dep	265	5072396	5072660	-
Aa.chr1_Retroposon-L1-dep_2	Other	Retroposon	Retroposon-L1-dep	246	11108618	11108863	-
Aa.chr1_Retroposon-L1-dep_3	Other	Retroposon	Retroposon-L1-dep	209	13785807	13786015	+
Aa.chr2_Retroposon-L1-dep_4	Other	Retroposon	Retroposon-L1-dep	283	8291701	8291983	+
Aa.chr2_Retroposon-L1-dep_5	Other	Retroposon	Retroposon-L1-dep	132	10993330	10993461	-
Aa.chr2_Retroposon-L1-dep_6	Other	Retroposon	Retroposon-L1-dep	369	17787359	17787727	+
Aa.chr2_Retroposon-L1-dep_7	Other	Retroposon	Retroposon-L1-dep	282	19559468	19559749	-
Aa.chr2_Retroposon-L1-dep_8	Other	Retroposon	Retroposon-L1-dep	396	22746310	22746705	+
Aa.chr3_Retroposon-L1-dep_9	Other	Retroposon	Retroposon-L1-dep	128	4886117	4886244	+
Aa.chr3_Retroposon-L1-dep_10	Other	Retroposon	Retroposon-L1-dep	422	14738347	14738768	+
Aa.chr3_Retroposon-L1-dep_11	Other	Retroposon	Retroposon-L1-dep	120	15464763	15464882	-
Aa.chr3_Retroposon-L1-dep_12	Other	Retroposon	Retroposon-L1-dep	217	15633930	15634146	+
Aa.chr3_Retroposon-L1-dep_13	Other	Retroposon	Retroposon-L1-dep	292	19050237	19050528	-
Aa.chr3_Retroposon-L1-dep_14	Other	Retroposon	Retroposon-L1-dep	196	20021947	20022142	-
Aa.chr3_Retroposon-L1-dep_15	Other	Retroposon	Retroposon-L1-dep	150	21652627	21652776	+
Aa.chr3_Retroposon-L1-dep_16	Other	Retroposon	Retroposon-L1-dep	144	21652771	21652914	+
Aa.chr3_Retroposon-L1-dep_17	Other	Retroposon	Retroposon-L1-dep	217	26611223	26611439	+
Aa.chr3_Retroposon-L1-dep_18	Other	Retroposon	Retroposon-L1-dep	238	26924774	26925011	-
Aa.chr4_Retroposon-L1-dep_19	Other	Retroposon	Retroposon-L1-dep	265	6114066	6114330	+
Aa.chr4_Retroposon-L1-dep_20	Other	Retroposon	Retroposon-L1-dep	365	13172055	13172419	-

Arabis alpina (v4.0)

ID:

Aa.chr1_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

265

Start:

5072396

End:

5072660

Strand:

-

>Aa.chr1_Retroposon-L1-dep_1

GATGCAAAGGAAAACGCCACATAGGAACTTCAACTCTTAACATGGACCCTCGCAAACCAACATTAGCCATCTACACACTAAAAGGAGGTCACCTTCACGCAAAGAGAAGAGTTGAAGAACAAACTCACTGCTGGTCTTGTATCTCTCCAAAACCCAAAGACAAGTAGAAATCCAAGTAGATGCCTCCACAACAAGCTTCTAACCAAGAGGCGAACCCAAACAAACGACCTAAAGCAACTCTAACCACCTATAATCGAAGAGAAGG

Arabis alpina (v4.0)

ID:

Aa.chr1_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

246

Start:

11108618

End:

11108863

Strand:

-

>Aa.chr1_Retroposon-L1-dep_2

CAAGGAAGATAACCTTGAAATCCACTTGGGAATACTCTAACTGGGATCACCAACTCTTACACGCGGACACAGCCAGCCAACCTTTGCCACCTAAAAACGAAAGGTCAACCACCTCCTCGCCAGAGAAGAATCGGAGAACAAAACCACTGCAAAGTGTTGAGCTCAACCACAAAACCCTAAGGAATCACATAGAGAACAAGTATGTGCGTCTACACTAGCAAACCATCTGATTGAAGAACCCCAAAA

Arabis alpina (v4.0)

ID:

Aa.chr1_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

209

Start:

13785807

End:

13786015

Strand:

+

>Aa.chr1_Retroposon-L1-dep_3

TGTGGAGGCATCTACTGCTTGTTTTCCATGTTTAGGTGTGGAAATTAGTATCAAGACGAAGCAATGGTATCGATCTTCATCTCTGCTCTTGCGAGGAGGTGGCTAGTGTTTTACCTGTAGATGGTTTTCACTAGTTTGCGAGGGTCCGCGTGTTAGAGGTGCTGATCTTATTGGGCGTTTTTTCTATCAGTCTTCAAGGCTTTGCTTTG

Arabis alpina (v4.0)

ID:

Aa.chr2_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

283

Start:

8291701

End:

8291983

Strand:

+

>Aa.chr2_Retroposon-L1-dep_4

CTAGTACTTCTTTATTGGTTATTTTCTTCTCTTGTATAGGTGTTTAGAAGTGGGATAGGTCTCCAGTTTTGGGTTCACCATTTGGATGGAAGTTCTTTGCGGAGACATCTACTAGCATGAATCTTTTTAGTCTTTGGAGGTGGTTTTCAAGAAGAAGTAGTGAGTTCTATCTTCAATTTTTCTCTTGCAAGGATGTGACCAACTCTTAGTTTGTAGATGGCTAAAGATAGTTTGTGAGTGTCTTCATGTAAGAGTTATTGGCCCTCTTTGGTGTTTTTCCTTT

Arabis alpina (v4.0)

ID:

Aa.chr2_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

132

Start:

10993330

End:

10993461

Strand:

-

>Aa.chr2_Retroposon-L1-dep_5

TTTTTTTTTTTTTGCCATCTAAAGAGTTGATTCATTCATCGAGAGAGTTTAAATGGGTTACAACAGAGCCTAGTAAAGGATAAATCCTTTCTAGGAAGAGAGCCAGCGAGCAACTAAAAGCCCCTAGGAGCA

Arabis alpina (v4.0)

ID:

Aa.chr2_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

369

Start:

17787359

End:

17787727

Strand:

+

>Aa.chr2_Retroposon-L1-dep_6

GGGTTCGTCTTTCTGATGGTAAATCGTTATGGAGGCATCTACTGGCCTATCTTTGAGTCATATGTGGTTTTGGGGTGTGGTTTCCAGACAAAGCAATGGTTTCGCTTTTTAACTCTTCTCTTGTGAGGAGGTGACCAGTTTTAATCTGTAGGTGGTTGAGGCTGGTTTACGAGTGTCCGCGTGCAAGAGTTTTGGGTCTTAAAAGGCGTTTTCCCTGTTGGAGGTCAAGGATTGTCCTTGAACCGAGTTCATCTCGAGGTTTCAGTCTCTTTGGAATGTTCTTGTGGGTGTGGTTGTTTAGCTATGTCCTCCTCTTTCATGTGTTCTTTCTCTGCTAGTGTGGTTGTCAGTTGAGCTTGCTTTTGGATC

Arabis alpina (v4.0)

ID:

Aa.chr2_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

282

Start:

19559468

End:

19559749

Strand:

-

>Aa.chr2_Retroposon-L1-dep_7

AAGGAGACTTTGACCGATGCAAAGGAAAACGCCATATAGGATCTTCATCTCTTAACACGGACCCTCGCAAACCAACCTTAGCCATCTACTCGCTAAAGGAAGGTCACCTTCTCGCAAAGAAAAGAGCTGAAGAACAAGCTCACTGCTGGTCTTGAACCTCACTGTAACCCAAAGGCAAAGTGAAAGCCACATAGATGCCTCCACAACAAACTTCTAACCACAAGACGAACCCAAACAACGACCTAATTCATCTCTAGACATCTATAAACGAAGAGGAAGGAA

Arabis alpina (v4.0)

ID:

Aa.chr2_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

396

Start:

22746310

End:

22746705

Strand:

+

>Aa.chr2_Retroposon-L1-dep_8

TGTTTTGGGTTAGGTCTCGTTGATGGGGTTCGTCTTTCTGATGGTAAGTCGTTGTGGAGGCATCTACTGGCCTTTCTCTGAGCCCCTGGTGTTTTGGGGTTTGGTTTTCAGACGAAGCAATGGGTTCGATCTTCAACTCTGCTCTTGCGAGGAGGTGGCTAGTTTTAATCTGTAGGTGGTTGAAGCTGGTCTACGAGTGTCCGCGTGTATGAGTTCTAGATCTTAAAAGGCGTTTTCCCTGTTGGAGGTCAAGGCTTGTCCTTGAACCGAGTCCATCTCGAGGTTTCAGTTTCCTTGGAGTGTACATTGTGGTGGGTTTGTATGGTTATGTCCATTCTCTTCCTTACGATCTTTCTCTGCTAGTGTTGTTGCCGGTTGAGCTTACTTTTGGTCCTT

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

128

Start:

4886117

End:

4886244

Strand:

+

>Aa.chr3_Retroposon-L1-dep_9

TTGCGTGGAGGTGGCTAGTTCACATTCTGTAGATGAATGTGGCTAGTTTGCGAGGGTCCGTGTGCTAGAGTGGTTGATCTTCTTCGGTGTTTTCCCCTCGGAGGTCAAGGAGTTTTTCTTTAAGCCTT

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

422

Start:

14738347

End:

14738768

Strand:

+

>Aa.chr3_Retroposon-L1-dep_10

TCTTGCTTCTGCTTTTGTTTCCTTGGCCGGTTCTTGTGCTTTGTTTGTGGCTAGGTCTCGGCTGGTTGGGTTCGTCTGCTTGATGGAGACTCGCTTTGGAGGCATCTACTATCCTGCCTCTGAGGTTTTGGAGGTTGGTATCAAGACGAAGTAGTGGGTTCGATTTTTAGCTTTTCTCTTTGCGAGGAGGTGTTTAGTTTTCAATTTGTAGGTGATTGAGGTTGATCTACGAGTGTCCGCGTATAAAAGCTATTGAACTTGGTCGGCGTTTTCCCAATCAGTTTTCAAAGTATCTTTACGTTGAGCTTAGTTTTATCTCAAGGTCGGGTTCTTGGGCGAGTTTGCTTCTAAGTAGTTACTGTGCTATGGTTTTATTCAGTTTCTGTGGTCTATTCCGTTAGTGTTGTTGCTTGTTGAGCTTG

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

120

Start:

15464763

End:

15464882

Strand:

-

>Aa.chr3_Retroposon-L1-dep_11

TAGAACCAGAAAAAGCATAAGAAAAGAGACAAGGGGACCGGCACCGGTGCTATCGGAGCCACCAGTACCGATCCAATCTAAAAACGTCGAGAGGAGGCTGAGATGGAGAAAAAGCTTTTT

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

217

Start:

15633930

End:

15634146

Strand:

+

>Aa.chr3_Retroposon-L1-dep_12

TGGGTTCGCTAACCGGTCAGAAGTTTGTTGTGGAGGCATATACTTCGGCCTCTTCTTAGCTTTTGGGTTTTGGAGAGGTTATCAAGACCAGCAGTGAGCTTGTTCTACAGCTCTTCTCTTTGCGTGAAGGTGTCCTTCCTTAGTGTGTAGATGGCTTTGGTTGGTTTGCGAGGGTCCGTGTTAAGAGAAGTAGATCCTATTTGGCGTTGTCCCTTTC

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

292

Start:

19050237

End:

19050528

Strand:

-

>Aa.chr3_Retroposon-L1-dep_13

AGTAACTTTGAAAGCTGAATGGGAAAACGCCGACCAAGACCAAAAGCTTTTGCACGCTAACACTCGTAGAACAAACTTAATCACCTACAGATTAAGACTTGAACACCTCCTCGCAAGAGAAAAGCTAAAAATCGAATTCACTACTTCGTCTTGATACCAATCTCCAAAAACTCAAAGGAAGGATAGTAGATGCCTCCAAAGTGAATTTCCATCAAGAAGACGAACCCAATCTACCCAAACCTAGCCACAAACAAAGCACAAGAACCGGCCAAGAAAACAAAAGCAGAAAGAA

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

196

Start:

20021947

End:

20022142

Strand:

-

>Aa.chr3_Retroposon-L1-dep_14

AGCCTTGAAGACTGATAGGAAAACGCCCACGAAGATCATCACCTCTAACACGCTGACCCTCGGAAACTAGTGAAAACCATCTACAGGTAAAACACTAGCCACCTCCTCGCAAAAGCAGAGATGAAGATCGTTACCACTGCTTGGTCTTGATACTAACTCCCCACACCTAAACATGGAAAACAAGTAGTAGATGCCT

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

150

Start:

21652627

End:

21652776

Strand:

+

>Aa.chr3_Retroposon-L1-dep_15

GGTTAGAAGTTTGTTGTGGAGGCATCTACTTGGCCCTCTTCCTAGCCTTTGGGTTTTGGAGAGGTTTTCAAGACCAACAGTGAGCTTGTTCTACAGCTCTTCTCTTTGCGTGAAGGTGACCTCCCTTGGTGTGTAGATGGCTATGGTTGG

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

144

Start:

21652771

End:

21652914

Strand:

+

>Aa.chr3_Retroposon-L1-dep_16

GGTTGGTTTTCAAGACCAATAGTGAGCTTGTTCTACAGCTCTTCTCTTTGCGTGAAGGTGACCTCCCTTAGTGTGTAGATGGCTATGGTTGGTTTGCAAGGTCTGTCTTAAGAGCAGTAGATCATATTTGGCATTGTCCTCTTC

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_17

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

217

Start:

26611223

End:

26611439

Strand:

+

>Aa.chr3_Retroposon-L1-dep_17

TGGGTTCGCTAACCCGTTAGAAGTTTATTGTGGAGGCATCTACTTAGGCCTCTTCTTAGCTTTTGGGTTTTGAAGAGGTTTTCAAGACCAGCAGTGAGTTTGTTCTACAGCTCTTCTCTTTGCATGAAGGTGACCTTCCTTAGTGTGTAGATGACTTTGGTTGGTTTGCGAGGGTCTGTGTTAAGAGAAGTAGATCCTATTTGGCGTTGTCCCTTTC

Arabis alpina (v4.0)

ID:

Aa.chr3_Retroposon-L1-dep_18

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

238

Start:

26924774

End:

26925011

Strand:

-

>Aa.chr3_Retroposon-L1-dep_18

AAGGACGAGCCTTGAAATCTGCAAGGGGAAACGTTAAAGAGGACAACCAACCATTAACCACGGACACTCGCTCGCCAACTTTAGCCACCTACAGACAAAAAGAAGACCGCGTTCCGCCCGTTAACAAAAGATGATCTAACACAACTGTATAGACTTGAGCCCATCTCAAAACCCATAAGGATCCACGGGAGGAGCTAGTAGATGCCCCTTCAGCAATGCACCATCCGAATGACGAACC

Arabis alpina (v4.0)

ID:

Aa.chr4_Retroposon-L1-dep_19

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

265

Start:

6114066

End:

6114330

Strand:

+

>Aa.chr4_Retroposon-L1-dep_19

CCTTCTCTTCGATTATAGGTGGTTAGAGTTGCTTTAGGTCGTTTGTTTGGGTTCGCCTCTTGGTTAGAAGCTTGTTGTGGAGGCATCTACTTGGATTTCTACTTGTCTTTGGGTTTTGGAGAGATACAAGACCAGCAGTGAGTTTGTTCTTCAACTCTTCTCTTTGCGTGAAGGTGACCTCCCTTTAGTGTGTAGATGGCTAAGGTTGATTTGCGAGGATCCGTGTTAAGAGTTGAAGTTCCTATGTGGCGTTTTTCTTTGCATC

Arabis alpina (v4.0)

ID:

Aa.chr4_Retroposon-L1-dep_20

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

365

Start:

13172055

End:

13172419

Strand:

-

>Aa.chr4_Retroposon-L1-dep_20

CAAAAGCAAGCTCAAACGACAACCACACTAGCATAGAAAGAACACATGAAATAGGAGGACATAGCTAAGCAACCAGACCCACACAAAAACTCCAAAGAGACTAAAATCTCGAGATGAACTTGGTTCAAGGACAATCTTTGACCTCCAACAACGAAAACGCCTTTTAAGACTCAAAACTCTTGCACACGGACACTCGTAAACCAGCCTCAACCACCTACAGATTAAAACTGATCACCTCATCACAACAGAAGAATTAAAGATCAAAACCATTGTTTCGTCTGAAAACCACACCCCAAAACCACATAGGACTCAGAGATAGGCCAATATATGCCTCCACAACGACTTACCATTAAAAAGACGAACCC