TBGR-Browse-Aal-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr1_rRNA_1	Retrotransposons	Ret_other	rRNA	142	12679925	12680066	+
Aa.chr2_rRNA_2	Retrotransposons	Ret_other	rRNA	397	2341387	2341783	-
Aa.chr2_rRNA_3	Retrotransposons	Ret_other	rRNA	174	2342684	2342857	-
Aa.chr2_rRNA_4	Retrotransposons	Ret_other	rRNA	309	2342855	2343163	-
Aa.chr2_rRNA_5	Retrotransposons	Ret_other	rRNA	501	2343155	2343655	-
Aa.chr2_rRNA_6	Retrotransposons	Ret_other	rRNA	500	2343666	2344165	-
Aa.chr2_rRNA_7	Retrotransposons	Ret_other	rRNA	561	2344176	2344736	-
Aa.chr2_rRNA_8	Retrotransposons	Ret_other	rRNA	227	2344727	2344953	-
Aa.chr2_rRNA_9	Retrotransposons	Ret_other	rRNA	395	2344936	2345330	-
Aa.chr2_rRNA_10	Retrotransposons	Ret_other	rRNA	159	2345328	2345486	-
Aa.chr2_rRNA_11	Retrotransposons	Ret_other	rRNA	134	2350081	2350214	-
Aa.chr2_rRNA_12	Retrotransposons	Ret_other	rRNA	290	2350243	2350532	-
Aa.chr2_rRNA_13	Retrotransposons	Ret_other	rRNA	443	2350530	2350972	-
Aa.chr2_rRNA_14	Retrotransposons	Ret_other	rRNA	371	2350950	2351320	-
Aa.chr2_rRNA_15	Retrotransposons	Ret_other	rRNA	248	2351331	2351578	-
Aa.chr2_rRNA_16	Retrotransposons	Ret_other	rRNA	262	2351589	2351850	-
Aa.chr2_rRNA_17	Retrotransposons	Ret_other	rRNA	385	2351849	2352233	-
Aa.chr2_rRNA_18	Retrotransposons	Ret_other	rRNA	359	2352244	2352602	-
Aa.chr2_rRNA_19	Retrotransposons	Ret_other	rRNA	314	2352613	2352926	-
Aa.chr2_rRNA_20	Retrotransposons	Ret_other	rRNA	393	2352938	2353330	-

Arabis alpina (v4.0)

ID:

Aa.chr1_rRNA_1

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

142

Start:

12679925

End:

12680066

Strand:

+

>Aa.chr1_rRNA_1

ACTGCCTTGAATTATAATTACCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAACCATTTGTCGCTAAGATTCGA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_2

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

397

Start:

2341387

End:

2341783

Strand:

-

>Aa.chr2_rRNA_2

CTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCAACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGGGCCCGGTCCGTTGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTCTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTGATCCCGCCTGACCTGGGGTCGC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_3

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

174

Start:

2342684

End:

2342857

Strand:

-

>Aa.chr2_rRNA_3

ACAGGTATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGACGGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGG

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_4

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

309

Start:

2342855

End:

2343163

Strand:

-

>Aa.chr2_rRNA_4

CGGNNNNNNNNNNGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGACGGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCNNNNNNNNNNTCATTCAAT

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_5

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

501

Start:

2343155

End:

2343655

Strand:

-

>Aa.chr2_rRNA_5

TCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_6

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

500

Start:

2343666

End:

2344165

Strand:

-

>Aa.chr2_rRNA_6

CATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAATAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCAC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_7

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

561

Start:

2344176

End:

2344736

Strand:

-

>Aa.chr2_rRNA_7

GACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGTATCGCCGACCGAAGGGACAAGCCGACCGGTGCACACCGCGAGGCGGACCGGCCGACCCATCCCAAGGTTCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCANNNNNNNNNNCCGTGTCAGG

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_8

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

227

Start:

2344727

End:

2344953

Strand:

-

>Aa.chr2_rRNA_8

CCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGNNNNNNNNNNTACCACCATGGTAGGCCA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_9

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

395

Start:

2344936

End:

2345330

Strand:

-

>Aa.chr2_rRNA_9

TACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGTTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCATAAATCACGGCAAGGCCCCNNNNNNNNNNTTC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_10

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

159

Start:

2345328

End:

2345486

Strand:

-

>Aa.chr2_rRNA_10

TTCGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCATAAATCACGGCAAGGCCCCTAACAATTCTCTCAAACGCTAAGTAAGTAAGAAGAGAAGAGGTCTTGACCGTCATCTTTT

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_11

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

134

Start:

2350081

End:

2350214

Strand:

-

>Aa.chr2_rRNA_11

TCGAATCTTAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCGCCGCTCGGTGGTAATTATAATTC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_12

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

290

Start:

2350243

End:

2350532

Strand:

-

>Aa.chr2_rRNA_12

TCGAATCTTAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGCCGTCTGCAAAGGATTCTACCCGCCGCTCGGTGGTAATTATAATTCAAGGCAGTCAGAACGGCGCTTCCGCCGAACGGACTTAGCCTACGACACGTGCCTTTGGGAGCCAAAGCTCCTACTGCGGGTCGGCAATCGGGCGGCGGGCACATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_13

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

443

Start:

2350530

End:

2350972

Strand:

-

>Aa.chr2_rRNA_13

AGCNNNNNNNNNNGGTCGGCAATCGGGCGGCGGGCACATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGACGCGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_14

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

371

Start:

2350950

End:

2351320

Strand:

-

>Aa.chr2_rRNA_14

AAGGATCGATAGGCCACGCTTTCNNNNNNNNNNGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCGGCCCGCCGAAGCAAGCCTTGGGTCCAAAAAGAGGGGTAACACCCCGTCTCCGATTCACGGAGTAAGTAAAATAACGTTA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_15

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

248

Start:

2351331

End:

2351578

Strand:

-

>Aa.chr2_rRNA_15

CGGATCGGCCCGCCGAAGCAAGCCTTGGGTCCAAAAAGAGGGGTAACACCCCGTCTCCGATTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGG

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_16

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

262

Start:

2351589

End:

2351850

Strand:

-

>Aa.chr2_rRNA_16

CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_17

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

385

Start:

2351849

End:

2352233

Strand:

-

>Aa.chr2_rRNA_17

CANNNNNNNNNNTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTGTTCGACGTCCGGGGAAACCCCCGAGAGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCGGAACTGGGATCCCCGAACCCAGTCCTCAGAGCCAATCCTTTTCCC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_18

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

359

Start:

2352244

End:

2352602

Strand:

-

>Aa.chr2_rRNA_18

CGCCGCGGAAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCGGAACTGGGATCCCCGAACCCAGTCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCC

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_19

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

314

Start:

2352613

End:

2352926

Strand:

-

>Aa.chr2_rRNA_19

CGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGGATCCCCTTTCGAAGTTCGCGCATAAGCGCTATCAGACGGGTTTCCCCCGACTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGG

Arabis alpina (v4.0)

ID:

Aa.chr2_rRNA_20

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

393

Start:

2352938

End:

2353330

Strand:

-

>Aa.chr2_rRNA_20

TAAGCGCTATCAGACGGGTTTCCCCCGACTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTACGGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGC