ID Class Order Superfamily Length Start End Strand View
Aa.chr1_LTR-Cassandra_1 RetrotransposonsLTRLTR-Cassandra24259575305957771-
Aa.chr1_LTR-Cassandra_2 RetrotransposonsLTRLTR-Cassandra32963507466351074+
Aa.chr1_LTR-Cassandra_3 RetrotransposonsLTRLTR-Cassandra33265697616570092+
Aa.chr1_LTR-Cassandra_4 RetrotransposonsLTRLTR-Cassandra12169438156943935+
Aa.chr1_LTR-Cassandra_5 RetrotransposonsLTRLTR-Cassandra14076819007682039-
Aa.chr1_LTR-Cassandra_6 RetrotransposonsLTRLTR-Cassandra9976820497682147-
Aa.chr1_LTR-Cassandra_7 RetrotransposonsLTRLTR-Cassandra16676821487682313-
Aa.chr1_LTR-Cassandra_8 RetrotransposonsLTRLTR-Cassandra19976823207682518+
Aa.chr1_LTR-Cassandra_9 RetrotransposonsLTRLTR-Cassandra28676825967682881-
Aa.chr1_LTR-Cassandra_10 RetrotransposonsLTRLTR-Cassandra10076829247683023-
Aa.chr1_LTR-Cassandra_11 RetrotransposonsLTRLTR-Cassandra30676830247683329-
Aa.chr1_LTR-Cassandra_12 RetrotransposonsLTRLTR-Cassandra35276834487683799+
Aa.chr1_LTR-Cassandra_13 RetrotransposonsLTRLTR-Cassandra18076838057683984-
Aa.chr1_LTR-Cassandra_14 RetrotransposonsLTRLTR-Cassandra32477381427738465+
Aa.chr1_LTR-Cassandra_15 RetrotransposonsLTRLTR-Cassandra22077759837776202-
Aa.chr1_LTR-Cassandra_16 RetrotransposonsLTRLTR-Cassandra29877761957776492-
Aa.chr1_LTR-Cassandra_17 RetrotransposonsLTRLTR-Cassandra35283630048363355+
Aa.chr1_LTR-Cassandra_18 RetrotransposonsLTRLTR-Cassandra13683634068363541+
Aa.chr1_LTR-Cassandra_19 RetrotransposonsLTRLTR-Cassandra33195504569550786-
Aa.chr1_LTR-Cassandra_20 RetrotransposonsLTRLTR-Cassandra35297094959709846-

< 1 2 3 4 5 > Total 46


Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

242

Start:

5957530  

End:

5957771

Strand:

-

>Aa.chr1_LTR-Cassandra_1

TATAACAGCCCGACCGCCCTGCTGTGGACCCTATGCCCATTTTTGGCTCGCAAGCCGAAACTTTTCTGACGGTCAGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTGCTGACCTTGCAATCACCACGCGATCTTTCCCCGTGTTTTGGCCTCACTCGCACGATACTGGAAGGCCATCCATCATGAAATTGCTCCAGCTCAAGCACGCTTAACTTTAGAATTCTCTCATGATGTGTGACC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

6350746  

End:

6351074

Strand:

+

>Aa.chr1_LTR-Cassandra_2

AATATGTGATGCATCAGAGGGGCTAAAAATAATTGATTTGACTAACTATGTCATCAAAGTGCACTTATCTATTTGGTCACACATCATGAGAAAACTTCGGAGTTAAGCGTGCTTGAGCTAGAGCAATTTCATGCTAGGTGACCTACTGGGAAGTAATTTCCAGTACCGTACGACTTAGGCCAAAACACGGGAAAAGATCGCGTGGTGACTGTAGGATCAGTAAACATGCATTTCGAGTCTTCCGGACTAACACATTGACCGTCAGAAAAATCAGCATGTGGGCAGAGACTGGGTTTAGGGCCCACAAATAGGGCAGTCCGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

6569761  

End:

6570092

Strand:

+

>Aa.chr1_LTR-Cassandra_3

GAATATGTGGTGCATGCAGAGAGGCTTAAAAGAATTGATTTGGCTACTTATGTCACCAAAGTGCATTTATCTTTTCGGTCACTTGTCTTGAGAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAATCGAAAGATGAGTGACCTACTGGGAAGTCATATCCAGTACCGGGCGAGTGAAGCCAAAACTCGGGGAAAGATCGCGTGGTGATTGTAGGGTCAGTAAACATGCATTTCGAGCCTCCAGGACTAACGCATCGACCGTCAGAAGAGTTTCGGCTTGCGAGCCAAAAGTGGACGTGAGACCCACGGCAGGACGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

121

Start:

6943815  

End:

6943935

Strand:

+

>Aa.chr1_LTR-Cassandra_4

TGCAGGGTCAGTAAACATGCATTTCGAGTCTCCCGGACTAACGCACCGACCGTCAGAGAAGTCTCGGCTTGCGAGCCGAGAGTGGGCGTGGGGCCCATGGCAGGGCGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

140

Start:

7681900  

End:

7682039

Strand:

-

>Aa.chr1_LTR-Cassandra_5

GCCCCGACCGCCCACTCTTGACCCGCGGGCCTAAACTTTTCTGACCGTCGGTGCTTATTCCGGGAGACTCGAAATGCATGTTTATTGACCCAGCAATCACTAGATGATCTTTTCCAGTATTTTGGCCTCACTCACACGAT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

99

Start:

7682049  

End:

7682147

Strand:

-

>Aa.chr1_LTR-Cassandra_6

CATCCCTACTCACAGAGCGCAATGTCCTCGTTGCGTACCAAGATCGTTACCTCGACAGTGATATACCCACACTCGTCATGGTTAGACTTTGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

166

Start:

7682148  

End:

7682313

Strand:

-

>Aa.chr1_LTR-Cassandra_7

TGTAAAGCCCCCACCGCCTTGATGTGGACCCTATGCCCACTCTCGGCCCGCGAGTCTAAACTTTTCCGATGTTAGGTGCATTAGTCCGGGAGGCTCCAAATGCATGTTAACGGATCCTGCAATCACCACATGATTTTTCCCCGTATTTTGTCCTCAGTCACATGAT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

199

Start:

7682320  

End:

7682518

Strand:

+

>Aa.chr1_LTR-Cassandra_8

TGTAACACCGTGGTTTCTGGAAATATATGGTGTATGCGGAGAGCCTTAAAAGAATTGATTTGACTACTTATGTCACAAAAGTACACTTATCTTTTCGGTCCTTTATCTTGAGAGAACTCTCGAGTTAAGCGAGCTTTAGCTGGAGCAATCGAAAGATGGGTGACCTACTGGCAAGTCATTTCCAGTATCGTGCGAGTGA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

286

Start:

7682596  

End:

7682881

Strand:

-

>Aa.chr1_LTR-Cassandra_9

CCCAAGCCCACTCTCGGCATGCGGGCCAAAACTCATCCGACGGCCAGTGCGTTAGTCCGGGAAGCTCGAAATGCATGTTTACTAACCCTGTAATTACCACACGATCTTTCCCCGTGTTTTGGCCTCACTCGCACAATACTGGAAATTACTTCCCACTAGGTCACCCATCATGAAATTGCTTCAGCTCAAGCACACTTAACTCTGAAGTTCTCTAAGATAAGTGCACTTTCGTGATATAGGTAGCCAAATCAATTTTGTTAAGCCTCTCTGCATGCATTACATATTC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

7682924  

End:

7683023

Strand:

-

>Aa.chr1_LTR-Cassandra_10

TCACCCCCTCTCACAGCACGCAACGTCCTCGTTGCGCACCAACATCGTTATCCTGACAGTGTTATACCCACACTTGTCAAGATTCATCTATGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

306

Start:

7683024  

End:

7683329

Strand:

-

>Aa.chr1_LTR-Cassandra_11

TATAACGCCCCGACCTGCTTGTGGGCCCCATACACACTCTCGGCCCGCAGGCCGAAACTCACCCGACGGTCGGTGCATTAGTCTGGGAGGCTCGAAATGCATGTTCACCACACGATTTTTCCCCATGTTTTGGCCTCACTCGCACGGTACTGGAAATTACTTCCCATCATGAAATTGCTCCATCTCAAGTACACTTAACTCTGGAGTTCTCTCATGATGTGTGACCGAAAAGATAAGTGCACTTTGGTGACATAGATAGCCAAACCATTGTTTATGCCTCTTCGCATGCATCACATATTCTTAGAA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

7683448  

End:

7683799

Strand:

+

>Aa.chr1_LTR-Cassandra_12

TGTAACACCCCGGTTTCTGAAAATATGTGGTGTATGTGGAGAGCCTCAAAAGAATTGATTTTGCTACCTATGTCACCAAAGTACAATTATATTTTTGGTCACTTGTCTTGAGAGAATTTCGGAGTTAAGCGTGCTTGAGTTGGAGAATTCGAAGAATGAGTGACCTACTAGGAAGTCATTTCCAGTACCGTGCGAGTTATGCCAAAACACGGGGAAAGATCCCTTAGGAAATACAGGGTTAGTAAACATGCATTTTGAGCCTCCGGACTAACGCATCGACCATCAAATGAGTTTTGGCCCGCATGCCGTGAGTAGGCATGGGGCCCACATGAAAGGCAGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

180

Start:

7683805  

End:

7683984

Strand:

-

>Aa.chr1_LTR-Cassandra_13

AATTACTTCCCAATAGGTCACCCATCCTTCAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTGAAGACAAGTGACCGAAAAGATAAGTATACTTTGGTAACATAGGTAGCCAAATCAATTATTTTAAGCCTCTCCGCATGCACCGCATATTCTCAGAACTCGGGATGTTACA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

324

Start:

7738142  

End:

7738465

Strand:

+

>Aa.chr1_LTR-Cassandra_14

TATAACACCCCGATTTCTGGTAATATCTAGTGCATACGAAGAGGCTTAAGAGAATTAATTTGGCTACCTATGTCACCAAAGTGCACTTATATTTTCGGTCACTGGTTTTGAGAGATCTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAATCAAAGGATGGGTGACCTACTGGGAAGTCATTCGGCCAAAACACGGGAAATATCACGTGGTCAGTAAACAAGCATTTCGAGCCTCCCAGAATAACACACCGACCAGCAGATAAGTTTGCGCCTGTGGGGCAAGAGTGAGCATGGGGGCCCAAATGAGGGGTGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

220

Start:

7775983  

End:

7776202

Strand:

-

>Aa.chr1_LTR-Cassandra_15

TGTAATGCCTCGACCACCCTTTTGTGGGCCCCACACCCACTCTCGGCACGTAGGTCCAAACTTATCCGACGGTCGGTGCGTTAGTCTAAAAGGTTCAAAATGCATGTTTACTGACCATGTAATCACCACACGATCTTTTCCCTTATTTTGTCCTCACTCGTACGGTATTGGAAATGACTTCCCAATACGTCACCCATCCTTCAATTTCTCCAGCTCAAAC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

7776195  

End:

7776492

Strand:

-

>Aa.chr1_LTR-Cassandra_16

GCTCAAACTTATCCGACGATCGGTGCGTTGGTCCGAGAGGTTTGAAATGCATGTTTACTGACCATGCAATCGCCACACAATTTTTCCTCGTGTTTTGTCCTCACTCGTACGGTACTGGAAATGACTTTCGAGTAGGTCACCCATCCTTCAATTTCTCCAGCTCAAACACGCTTAACTCTAGAGTTCTCTCAAGACCAGTGACAAAAAAATAAGTGCACTTTGGTAACATAAGTAGCTAAATCAATTCTCTCAAGCCACTCCGCATGTACCACATATTTCCAGAAATTGGAGTGTTACA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

8363004  

End:

8363355

Strand:

+

>Aa.chr1_LTR-Cassandra_17

TGTAACACCCGATTTCTGCAAATATGTTGTGCATGTATAGAAGTTTTACAAAATTGATTTGGCTACCTATATCACCAAAGTGCACATATATTTTCGGTCGTTGGTATTGAGAGAGCTCCAGAGTATAACGTGCTTGAGCTGGAGCAATTTAAGGATGGGTGACCAACTGAGAAGTCATTTCTAGTACCTTGTGAGTGAGGAAAAGACACGGGGAAAGATCACGTGGTGATTTGCAGGGTCAGTAAACATGCCTTTTGAGCCTTTCAGACTAACATACCCACAGTCAGACAAGTCTGAGCCCATGGGACGAGAGTGGGTGTGGGGGCCACAGAAGGGACGGTCGGGAGTTACA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

136

Start:

8363406  

End:

8363541

Strand:

+

>Aa.chr1_LTR-Cassandra_18

AGTATGGACAAAACAAGGGGAAAGATCATGTCGTGATTTGCAGGGTCAGTAAACATGCCTTTCGAACTTTCCGGACTAACGCACCGACGGTCAAACAAGTTTGGACCCATGGGCCGAGAGTGGGAGTAGGATCTAC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

9550456  

End:

9550786

Strand:

-

>Aa.chr1_LTR-Cassandra_19

TATAACGCCCCAACCGCCCTTCATGTGGACTTCACGCCCACTCCCAACCCGCGGGCCGAAACTTTTCCGACGGTTGGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTACTAACCCTGCAATCACCACACGATCTTTTCCCGTGTTTTGGCCTCACTCGCACGGTACTGGAAATTACTTCCCATTAGATCACTCATCATGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCATGATGTGTGACCGAAAAGATAAGTGCATTTTAATGACATAGGTAGCCAAATCAATTTTTTTAAGGCTCTCCGCACGCACCACATAT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

9709495  

End:

9709846

Strand:

-

>Aa.chr1_LTR-Cassandra_20

TATAACGCCCCGACCACGCTTTCTGTGGGCCCATGCCCAAACTCGGCCCGCGGGCTGAAACTCATCTAACGGTCGGTGCGTTAGTCCGGGAGATTCGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCTCCGTGTTTTGGCTTCACTCACACGGTACTGAAAATGACTTTCTAGTAGGTCACCCATCCTTCGATTGCTCAAGGTCGAGCACGCTTAACTCTGGAGTTATCTCAAGACAAGTGACCGAAAAGATAAATGCACTTTGGTGACATAGGTAGCTAAATCGATTCTTTTAAGCCTCTCTGCATGCACCATGCATTAGCAGAATCCGAGGTGTTACA