TBGR-Browse-Aal-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
Aa.chr1_LINE_1	Retrotransposons	LINE	LINE	83	4023289	4023371	-
Aa.chr1_LINE_2	Retrotransposons	LINE	LINE	353	10261208	10261560	-
Aa.chr1_LINE_3	Retrotransposons	LINE	LINE	326	20716498	20716823	+
Aa.chr2_LINE_4	Retrotransposons	LINE	LINE	115	24957800	24957914	-
Aa.chr2_LINE_5	Retrotransposons	LINE	LINE	89	24957992	24958080	-
Aa.chr3_LINE_6	Retrotransposons	LINE	LINE	167	10293793	10293959	-
Aa.chr3_LINE_7	Retrotransposons	LINE	LINE	171	10502319	10502489	+
Aa.chr3_LINE_8	Retrotransposons	LINE	LINE	162	15643662	15643823	-
Aa.chr4_LINE_9	Retrotransposons	LINE	LINE	354	11665924	11666277	+
Aa.chr4_LINE_10	Retrotransposons	LINE	LINE	91	13608291	13608381	-
Aa.chr5_LINE_11	Retrotransposons	LINE	LINE	172	3718054	3718225	-
Aa.chr5_LINE_12	Retrotransposons	LINE	LINE	126	6625991	6626116	+
Aa.chr5_LINE_13	Retrotransposons	LINE	LINE	298	9936469	9936766	+
Aa.chr5_LINE_14	Retrotransposons	LINE	LINE	123	22547650	22547772	+
Aa.chr6_LINE_15	Retrotransposons	LINE	LINE	94	9798850	9798943	+
Aa.chr6_LINE_16	Retrotransposons	LINE	LINE	126	14059310	14059435	-
Aa.chr6_LINE_17	Retrotransposons	LINE	LINE	170	14059497	14059666	-
Aa.chr6_LINE_18	Retrotransposons	LINE	LINE	102	21818097	21818198	-
Aa.chr7_LINE_19	Retrotransposons	LINE	LINE	127	885107	885233	-
Aa.chr7_LINE_20	Retrotransposons	LINE	LINE	358	12210590	12210947	-

Arabis alpina (v4.0)

ID:

Aa.chr1_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

4023289

End:

4023371

Strand:

-

>Aa.chr1_LINE_1

TTTCTTTTTTTTTGGTAAACATGTTAAGATTTATTACCAAGTTTTTTGTTTTCGACAGAAATTACATAGAAACTAGTAGCGGA

Arabis alpina (v4.0)

ID:

Aa.chr1_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

353

Start:

10261208

End:

10261560

Strand:

-

>Aa.chr1_LINE_2

TTTTTTTTTTTTGGGTAAAATGTTAAATTGTATACAATTTTAGAATTGCAACAGCGGTTACAGAGATAACTAAGAAAGCGGAAAGACCGAAATCTATTAAACAAAGACAACATTACAACACAAAAAGAAACGGACAATCGATAAGCAAGATAGGCACCCGATAAACAACCCGAGAAGATCCTCGACAAAGAACACCGATTCCGAACACAATGTTTGGACATTTGTGTTGCTGCCACAATTCCAAAGAATTCCATTCCTCATCGTAGTTGCCACGAGCGATTCCACCCGAGGCCAGTCTCAAAACCTCTTAAGTAGTATCGCCTACAGCTTCTCCGAGGACAAACACAAAAACG

Arabis alpina (v4.0)

ID:

Aa.chr1_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

326

Start:

20716498

End:

20716823

Strand:

+

>Aa.chr1_LINE_3

TTGCGTTTTGTGTTTGTTCTCGGAGAAGCTGTTTTAAAGGCTCGCCTTGCGTGGAAGTTGTTCGTGGCAACGACGATGAGGACTCGAGTTTTAAGTAATTGTGGCAACAACACAAGTGTATGAGCTTAATTGTTCGGAATCGGTGTTTTTTCATCGGGAATCTTCTCAGTAGTATGCTTTGACGTGTGCTTAACTGTTTCTTGCTTTCTTGTAACTTTGTTTGTATTTTGTAGATTTTGGTATTTCTGCTTTCTTTGTTGTCTCTGTAATTTTGTTAAAAACTGAAAATTGGTAATATAATCTTAACATGTTTACCCAAAAAAAAA

Arabis alpina (v4.0)

ID:

Aa.chr2_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

24957800

End:

24957914

Strand:

-

>Aa.chr2_LINE_4

TTTTTTTTCCGGTAAATTGTTAAAATTTTATACCATTTTAAAATTGTTACAGCGGTTACAGAGAAAACTAAAAGAGAAGAAAAACCGAAAATCTACCAAACAAACACAACATTAC

Arabis alpina (v4.0)

ID:

Aa.chr2_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

89

Start:

24957992

End:

24958080

Strand:

-

>Aa.chr2_LINE_5

GAAACACCGATTCCGAATATTTAAGCTCGGACGTTGTGTTACTACCACAGTTCCAAAGATCTCGAGTCTTCATCGTCGTTGTCACGAGC

Arabis alpina (v4.0)

ID:

Aa.chr3_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

167

Start:

10293793

End:

10293959

Strand:

-

>Aa.chr3_LINE_6

GAAACACCGATTCCAATACTTAGGCTCAGACACTTGTGTTCTTGCCACAATTACTTAAAACTCGAATCCTCATCGTCGTTGTCACGAGTAACTTCCACTTGAGGCCAGTCTTCAAAACCTCAATGGTGGTAGTACATACGACTTCTCCGAGGACAAACAAAAAAACG

Arabis alpina (v4.0)

ID:

Aa.chr3_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

171

Start:

10502319

End:

10502489

Strand:

+

>Aa.chr3_LINE_7

TTCCGTTTTTGTGTTAGTCCTCGGAGAAGCTGTAGGTTTATACTAGCTACAAAGTTTTAAAGACGGGCTTTGGCTAGTATTGCTCGCGGCAACTACGATGAGGATTCCAGTTCTTAGGAGTTGCGGCAACAACACAAATCTCTGAGCTTAATTGTTCGGAATTAGTGTTTC

Arabis alpina (v4.0)

ID:

Aa.chr3_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

162

Start:

15643662

End:

15643823

Strand:

-

>Aa.chr3_LINE_8

AAACACCAATTCCGAGCAATTAAGCTCAGACATTTGTGTGGTTGCCGCAATTCCTAAGAACTTAAATCCTCATCGTAGTTGTCGCGAGCAATACCACCCAAAGCCCGTCCTTCTAGCTAGTATAAACCTACAGCTTCTCCAAAAACTAACATAAAAATGGAA

Arabis alpina (v4.0)

ID:

Aa.chr4_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

354

Start:

11665924

End:

11666277

Strand:

+

>Aa.chr4_LINE_9

TTCCATTTTTGTGTTTGTCTTCGGAGAAGCTGTAGGCGGTACTACTTATGAGGTTTTGAAGACTGGCCTCGGATGGAATCGCTGGTGGCAACGACGATGAAGCCTCGAGATCTTTGGAACTGTGGCAGTAACACAATTGTCCGAGTGTAAAAATTCGGAATCGGTGTTTCTCCAGCGAGGATCTTCTCGGTTTGTCTTTGCGAGTGTCTAACTTGTTTATGCCTTCACGTTTCTTTGTGTTGTAATGTTATGTTTGTTTGGTAGATTTCGGTCTTTCTGCTTTCTTAGTTTTCTCTGTAACTGCTGTCGCAATTTTAAAATGGTATAAAATCTAACATTTTACCCCCAAAAAAA

Arabis alpina (v4.0)

ID:

Aa.chr4_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

13608291

End:

13608381

Strand:

-

>Aa.chr4_LINE_10

GAGAAGCAAGGCAAAAGAAAAAGAGGAAAGGAGAAGGAAAAGCCCTCTCGCAGTCACCGTCACCGTCACCGATGGCTGGAGAAGCAAAGAT

Arabis alpina (v4.0)

ID:

Aa.chr5_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

172

Start:

3718054

End:

3718225

Strand:

-

>Aa.chr5_LINE_11

GAAACACCGATTCCGAACAATTAAGCTCAGACATTTGTGTTGTTGCCACAGTTACTTAAAAATCGAGTCCTCATCGTCATTGCCACGAGCAACTTCCACTCAAGGCCAACTTTTAAAATCTCACTTTGTGGTCGCGCCTACAGCTTCTCCGAGAACATACACAAAAACGCAA

Arabis alpina (v4.0)

ID:

Aa.chr5_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

126

Start:

6625991

End:

6626116

Strand:

+

>Aa.chr5_LINE_12

TTTTGAGGTGTTGAGGACTGGTCTCGGATAATGGTTGTTCGTGGTAACAACGATGGAGACTTGAGTTCCTAGGAATTGTGGCAACAACGCAAATGTTTGAGCTTAATTGTTCAAAATTGGTGTTTC

Arabis alpina (v4.0)

ID:

Aa.chr5_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

298

Start:

9936469

End:

9936766

Strand:

+

>Aa.chr5_LINE_13

GACTGGCCTCGGATGGAATCGTTCGTGGCAACGACGATGAAGACTCGAGATCTTTGGAACTGTGGCCGTAATACAATTGTCCGAGTGTAAAATTTCAGAATTGGTGTTTCTTCAGCGAGGATCTTCTCGGTTTGTCTTTGCGGGTGTCTAATTTGTTTATGCCTTCACGTTTCTTTGTGGTTGTAATGTTATGTTTGTTTGGTAGATTTCAGTCTTTCTGCTTTCTTAGTTTTCTCTGTAACCGCTGTCGCAATTTTAAAATGGTGTAAAATTTAACATTTTACCCAAAAAAAAAAAA

Arabis alpina (v4.0)

ID:

Aa.chr5_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

123

Start:

22547650

End:

22547772

Strand:

+

>Aa.chr5_LINE_14

CGAGGTTTTGAAGACTGGTCTGGGGTAGTAATTGCTCGTGGCAACAACAGTGGAGACTCAAGTTCCTAGGAATTGCGGCAACAACGAAAATGTCCGAATTTAATTGTTCAAAATTGGTATTTC

Arabis alpina (v4.0)

ID:

Aa.chr6_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

94

Start:

9798850

End:

9798943

Strand:

+

>Aa.chr6_LINE_15

GCTTGTGGCAACAACGATGGAGACTCGAGTTCTTTGAAGTTGTGACAACAACACAATTGTCCGATCTTAAGTGCTCGGAATCAGTGTTTTCTTT

Arabis alpina (v4.0)

ID:

Aa.chr6_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

126

Start:

14059310

End:

14059435

Strand:

-

>Aa.chr6_LINE_16

TTTTTTTTGTTTGGTAAAATGTTAAATTTTATACCATTTTAAAATTGCGACAGCGGTTACAAAGAAAACTAAAAAAGCAGAAAGATCGAAATCTACCAAACAAACATAACATTACAACACAAAGAA

Arabis alpina (v4.0)

ID:

Aa.chr6_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

170

Start:

14059497

End:

14059666

Strand:

-

>Aa.chr6_LINE_17

GAAACACCGATTCCGAATTTTTACACTCGGACAATTGTGTTACTGCCACAGTTCCAAAGATCTCGAGTCTTCATCGTCGTTGCCACGAGCGATTCCATCTGAGGCCAGTCTTCAAAACCTCATAAGTAGTACCGCCTACAGCTTCTCTGAAGACAAACACAAAAACGGAA

Arabis alpina (v4.0)

ID:

Aa.chr6_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

102

Start:

21818097

End:

21818198

Strand:

-

>Aa.chr6_LINE_18

GAATCTTCATTGTCGTTGCCACGAGCAAGCCTTACATGAGACCGTCCTCAAAACCTTGCTAGCAGCAGCGCCTATAGCTTCTCTGAGATTAACACAAAAACG

Arabis alpina (v4.0)

ID:

Aa.chr7_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

127

Start:

885107

End:

885233

Strand:

-

>Aa.chr7_LINE_19

TTTTTGTGTGTGTGGTAAATTGTTAAATTTTATTCCGTTTTAAAATTGTGACAACGGTTACAGAGAAATCTAAGAAAGCAGAAAGACCGAAACCTACCAAACAAATGAAACATTACAACACAAAAAA

Arabis alpina (v4.0)

ID:

Aa.chr7_LINE_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

358

Start:

12210590

End:

12210947

Strand:

-

>Aa.chr7_LINE_20

TTTTTTTTGTTTTGGTAAAATATTAAATTTTATACCATTTTAGAATGGTGACAGCGGTTACAGAGATAACTAAGAAAGCGAAAAAACCGAAATCTACTAAACAAAGACAACATTAAAACACAAAAGAAAACGGACAATCGATAAGCAAGATAAGCACCCGATAAACAACCCGAGAAGATCCTCGACAAAGAAACACCGATTCCGAACACAATGTTTGGACATTTGTGTTGCTGCCACAATTCCAAGGAATTCGAGTCCTCATGGTAGTTGCCATGAGCGATTCCACCCGAGGCCAATCCTCAAAACCTCTTAAGTAATATCGCCTACAGCTTCTCCGAGGACAAACACAAAAACGGAA